MGE detailed information
MGE type: Genomic_island MGE length: 25803 bp
Accession: NZ_CP100500 Location: 5028216..5054018 Organism: Escherichia coli strain LH50-c Replicon: chromosome
Accession: NZ_CP100500 Location: 5028216..5054018 Organism: Escherichia coli strain LH50-c Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NLZ13_RS24520 (5024151) | 5024151..5025335 | + | 1185 | Protein_4813 | ISL3 family transposase | - |
| NLZ13_RS24525 (5025385) | 5025385..5025979 | + | 595 | Protein_4814 | integrase core domain-containing protein | - |
| NLZ13_RS24530 (5026176) | 5026176..5027383 | + | 1208 | Protein_4815 | IS256 family transposase | - |
| NLZ13_RS24535 (5027700) | 5027700..5028155 | - | 456 | WP_000884153.1 | sigma factor-like helix-turn-helix DNA-binding protein | - |
| NLZ13_RS24540 (5028216) | 5028216..5029358 | - | 1143 | WP_254539348.1 | hypothetical protein | VF |
| NLZ13_RS24545 (5030193) | 5030193..5030368 | - | 176 | Protein_4818 | transposase | - |
| NLZ13_RS24550 (5030557) | 5030557..5030742 | - | 186 | Protein_4819 | transketolase family protein | - |
| NLZ13_RS24555 (5030793) | 5030793..5031484 | + | 692 | Protein_4820 | IS1 family transposase | - |
| NLZ13_RS24560 (5031857) | 5031857..5032048 | + | 192 | WP_001323513.1 | hypothetical protein | - |
| NLZ13_RS24565 (5032117) | 5032117..5032365 | + | 249 | WP_001323514.1 | ProQ/FINO family protein | - |
| NLZ13_RS24570 (5032383) | 5032383..5032931 | - | 549 | WP_001167455.1 | hypothetical protein | - |
| NLZ13_RS24575 (5033132) | 5033132..5033368 | - | 237 | WP_000958153.1 | AlpA family transcriptional regulator | - |
| NLZ13_RS24580 (5033437) | 5033437..5034009 | - | 573 | WP_254539349.1 | hypothetical protein | - |
| NLZ13_RS24585 (5034366) | 5034366..5035097 | - | 732 | WP_254539350.1 | inovirus Gp2 family protein | - |
| NLZ13_RS24590 (5035203) | 5035203..5035451 | + | 249 | WP_000573215.1 | hypothetical protein | - |
| NLZ13_RS24595 (5036681) | 5036681..5037904 | - | 1224 | Protein_4828 | hypothetical protein | - |
| NLZ13_RS24600 (5038005) | 5038005..5038889 | + | 885 | WP_000010380.1 | YfjP family GTPase | - |
| NLZ13_RS24605 (5039075) | 5039075..5039893 | + | 819 | WP_001234689.1 | DUF932 domain-containing protein | - |
| NLZ13_RS24610 (5039975) | 5039975..5040454 | + | 480 | WP_112037947.1 | antirestriction protein | - |
| NLZ13_RS24615 (5040470) | 5040470..5040946 | + | 477 | WP_001186726.1 | RadC family protein | - |
| NLZ13_RS24620 (5041009) | 5041009..5041230 | + | 222 | WP_000692298.1 | DUF987 domain-containing protein | - |
| NLZ13_RS24625 (5041249) | 5041249..5041881 | + | 633 | Protein_4834 | antitoxin of toxin-antitoxin stability system | - |
| NLZ13_RS24630 (5041931) | 5041931..5042299 | + | 369 | WP_039023579.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| NLZ13_RS24635 (5042390) | 5042390..5042800 | + | 411 | WP_039023580.1 | TA system toxin CbtA family protein | Toxin Detail |
| NLZ13_RS24640 (5042763) | 5042763..5042912 | + | 150 | Protein_4837 | DUF5983 family protein | - |
| NLZ13_RS24645 (5042988) | 5042988..5043185 | + | 198 | WP_085975623.1 | DUF957 domain-containing protein | - |
| NLZ13_RS24650 (5043270) | 5043270..5043830 | + | 561 | Protein_4839 | DUF4942 domain-containing protein | - |
| NLZ13_RS24655 (5044667) | 5044667..5046205 | + | 1539 | WP_001187177.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| NLZ13_RS24660 (5046571) | 5046571..5047905 | + | 1335 | WP_000092910.1 | cadaverine/lysine antiporter | - |
| NLZ13_RS24665 (5047985) | 5047985..5050132 | + | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| NLZ13_RS24670 (5050191) | 5050191..5051648 | + | 1458 | WP_000856824.1 | dipeptide/tripeptide permease DtpC | - |
| NLZ13_RS24675 (5051885) | 5051885..5053402 | + | 1518 | WP_001295065.1 | lysine--tRNA ligase | - |
| NLZ13_RS24680 (5053521) | 5053521..5053694 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| NLZ13_RS24685 (5053722) | 5053722..5054018 | - | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| NLZ13_RS24690 (5054245) | 5054245..5054517 | - | 273 | WP_000405653.1 | GNAT family N-acetyltransferase | - |
| NLZ13_RS24695 (5054529) | 5054529..5054759 | - | 231 | WP_000371704.1 | 4Fe-4S mono-cluster protein YjdI | - |
| NLZ13_RS24700 (5054940) | 5054940..5056571 | + | 1632 | WP_001216470.1 | sensor histidine kinase | - |
| NLZ13_RS24705 (5056568) | 5056568..5057287 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|