MGE detailed information
MGE type: Genomic_island MGE length: 35120 bp
Accession: NZ_CP100486 Location: 4504420..4539539 Organism: Escherichia coli strain LH85-a Replicon: chromosome
Accession: NZ_CP100486 Location: 4504420..4539539 Organism: Escherichia coli strain LH85-a Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NLZ16_RS21425 (4499974) | 4499974..4500861 | - | 888 | WP_072643803.1 | MurR/RpiR family transcriptional regulator | - |
| NLZ16_RS21430 (4501145) | 4501145..4502521 | + | 1377 | WP_254521304.1 | C4-dicarboxylate transporter DcuC | - |
| NLZ16_RS21435 (4502609) | 4502609..4504303 | + | 1695 | WP_001547044.1 | NAD-dependent malic enzyme | - |
| NLZ16_RS21440 (4504420) | 4504420..4504716 | - | 297 | WP_228178892.1 | helix-turn-helix domain-containing protein | - |
| NLZ16_RS21445 (4504811) | 4504811..4505206 | + | 396 | WP_252713907.1 | hypothetical protein | - |
| NLZ16_RS21450 (4505252) | 4505252..4506232 | + | 981 | WP_000019446.1 | IS5 family transposase ISKpn26 | Transposase |
| NLZ16_RS21455 (4506458) | 4506458..4506655 | - | 198 | WP_001238008.1 | hypothetical protein | - |
| NLZ16_RS21460 (4506795) | 4506795..4507061 | - | 267 | WP_000766272.1 | YkgJ family cysteine cluster protein | - |
| NLZ16_RS21465 (4507058) | 4507058..4508584 | - | 1527 | WP_252713974.1 | cobalamin adenosyltransferase | - |
| NLZ16_RS21470 (4508675) | 4508675..4509754 | - | 1080 | WP_089625517.1 | chemotaxis protein | - |
| NLZ16_RS21475 (4509803) | 4509803..4510699 | - | 897 | WP_072643799.1 | WYL domain-containing protein | - |
| NLZ16_RS21480 (4511119) | 4511119..4511856 | - | 738 | WP_001389182.1 | OmpW family outer membrane protein | - |
| NLZ16_RS21485 (4512223) | 4512223..4512564 | + | 342 | Protein_4205 | IS3 family transposase ISEc31 | Transposase |
| NLZ16_RS21490 (4513237) | 4513237..4514745 | + | 1509 | WP_001352025.1 | group II intron reverse transcriptase/maturase | - |
| NLZ16_RS21495 (4514826) | 4514826..4515314 | + | 489 | Protein_4207 | IS3 family transposase ISEc31 | Transposase |
| NLZ16_RS21500 (4515322) | 4515322..4515423 | - | 102 | Protein_4208 | hypothetical protein | - |
| NLZ16_RS21505 (4515493) | 4515493..4516116 | - | 624 | WP_032216521.1 | hypothetical protein | - |
| NLZ16_RS21510 (4516205) | 4516205..4516705 | - | 501 | WP_252713937.1 | hypothetical protein | - |
| NLZ16_RS21515 (4516973) | 4516973..4517203 | - | 231 | WP_032216528.1 | AlpA family transcriptional regulator | - |
| NLZ16_RS21520 (4517272) | 4517272..4517832 | - | 561 | WP_032216519.1 | hypothetical protein | - |
| NLZ16_RS21525 (4518191) | 4518191..4518922 | - | 732 | WP_252713936.1 | inovirus Gp2 family protein | - |
| NLZ16_RS21530 (4520598) | 4520598..4521386 | + | 789 | WP_000816188.1 | hypothetical protein | - |
| NLZ16_RS21535 (4521383) | 4521383..4522333 | - | 951 | WP_000157733.1 | hypothetical protein | - |
| NLZ16_RS21540 (4522439) | 4522439..4523323 | + | 885 | WP_023563932.1 | 50S ribosome-binding GTPase | - |
| NLZ16_RS21545 (4523442) | 4523442..4524131 | + | 690 | WP_109475807.1 | hypothetical protein | - |
| NLZ16_RS21550 (4524137) | 4524137..4524289 | + | 153 | WP_001696589.1 | DUF905 family protein | - |
| NLZ16_RS21555 (4524390) | 4524390..4525208 | + | 819 | WP_001234688.1 | DUF932 domain-containing protein | - |
| NLZ16_RS21560 (4525290) | 4525290..4525769 | + | 480 | WP_000860074.1 | antirestriction protein | - |
| NLZ16_RS21565 (4525785) | 4525785..4526261 | + | 477 | WP_001366830.1 | RadC family protein | - |
| NLZ16_RS21570 (4526324) | 4526324..4526545 | + | 222 | WP_000692323.1 | DUF987 domain-containing protein | - |
| NLZ16_RS21575 (4526564) | 4526564..4527208 | + | 645 | WP_252713935.1 | antitoxin of toxin-antitoxin stability system | - |
| NLZ16_RS21580 (4527258) | 4527258..4527626 | + | 369 | WP_088569162.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| NLZ16_RS21585 (4527716) | 4527716..4528093 | + | 378 | WP_057109034.1 | TA system toxin CbtA family protein | Toxin Detail |
| NLZ16_RS21590 (4528090) | 4528090..4528239 | + | 150 | Protein_4226 | DUF5983 family protein | - |
| NLZ16_RS21595 (4528315) | 4528315..4528512 | + | 198 | WP_023563519.1 | DUF957 domain-containing protein | - |
| NLZ16_RS21600 (4528597) | 4528597..4529439 | + | 843 | WP_072693117.1 | DUF4942 domain-containing protein | - |
| NLZ16_RS21605 (4530188) | 4530188..4531726 | + | 1539 | WP_001187178.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| NLZ16_RS21610 (4532092) | 4532092..4533426 | + | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| NLZ16_RS21615 (4533506) | 4533506..4535653 | + | 2148 | WP_001550474.1 | lysine decarboxylase CadA | - |
| NLZ16_RS21620 (4535712) | 4535712..4537169 | + | 1458 | WP_001550473.1 | dipeptide/tripeptide permease DtpC | - |
| NLZ16_RS21625 (4537406) | 4537406..4538923 | + | 1518 | WP_001550472.1 | lysine--tRNA ligase | - |
| NLZ16_RS21630 (4539042) | 4539042..4539215 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| NLZ16_RS21635 (4539243) | 4539243..4539539 | - | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| NLZ16_RS21640 (4539768) | 4539768..4540040 | - | 273 | WP_000405647.1 | GNAT family N-acetyltransferase | - |
| NLZ16_RS21645 (4540052) | 4540052..4540282 | - | 231 | WP_001550470.1 | 4Fe-4S mono-cluster protein YjdI | - |
| NLZ16_RS21650 (4540462) | 4540462..4542093 | + | 1632 | WP_001216477.1 | sensor histidine kinase | - |
| NLZ16_RS21655 (4542090) | 4542090..4542809 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|