MGE detailed information
MGE type: Prophage MGE length: 56349 bp
Accession: NZ_CP100428 Location: 1593456..1649804 Organism: Staphylococcus aureus strain RMSA24 Replicon: chromosome
Accession: NZ_CP100428 Location: 1593456..1649804 Organism: Staphylococcus aureus strain RMSA24 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NLG45_RS07940 (NLG45_07940) | 1588754..1589086 | - | 333 | WP_000731878.1 | glycine cleavage system protein H | - |
| NLG45_RS07945 (NLG45_07945) | 1589120..1590121 | - | 1002 | WP_000240060.1 | LLM class flavin-dependent oxidoreductase | - |
| NLG45_RS07950 (NLG45_07950) | 1590235..1590327 | - | 93 | WP_001802007.1 | hypothetical protein | - |
| NLG45_RS07955 (NLG45_07955) | 1590423..1591622 | + | 1200 | WP_000286476.1 | NADH-dependent flavin oxidoreductase | - |
| NLG45_RS07960 (NLG45_07960) | 1591695..1592522 | + | 828 | WP_000136018.1 | alpha/beta hydrolase | - |
| NLG45_RS07965 (NLG45_07965) | 1593456..1594901 | - | 1446 | WP_031883912.1 | SH3 domain-containing protein | - |
| NLG45_RS07970 (NLG45_07970) | 1594882..1595319 | - | 438 | WP_031883911.1 | phage holin | - |
| NLG45_RS07975 (NLG45_07975) | 1595455..1595754 | - | 300 | WP_000466784.1 | DUF2951 domain-containing protein | - |
| NLG45_RS07980 (NLG45_07980) | 1595800..1595964 | - | 165 | WP_000916020.1 | XkdX family protein | - |
| NLG45_RS07985 (NLG45_07985) | 1595957..1596346 | - | 390 | WP_001166599.1 | DUF2977 domain-containing protein | - |
| NLG45_RS07990 (NLG45_07990) | 1596346..1597812 | - | 1467 | WP_000067140.1 | BppU family phage baseplate upper protein | - |
| NLG45_RS07995 (NLG45_07995) | 1597812..1599722 | - | 1911 | WP_000429558.1 | minor structural protein | - |
| NLG45_RS08000 (NLG45_08000) | 1599738..1600028 | - | 291 | WP_000179858.1 | hypothetical protein | - |
| NLG45_RS08005 (NLG45_08005) | 1600028..1601611 | - | 1584 | WP_000384474.1 | prophage endopeptidase tail family protein | - |
| NLG45_RS08010 (NLG45_08010) | 1601620..1602444 | - | 825 | WP_001190533.1 | phage tail family protein | - |
| NLG45_RS08015 (NLG45_08015) | 1602444..1608644 | - | 6201 | WP_113532526.1 | phage tail tape measure protein | - |
| NLG45_RS08020 (NLG45_08020) | 1608658..1608816 | - | 159 | WP_000438833.1 | hypothetical protein | - |
| NLG45_RS08025 (NLG45_08025) | 1608858..1609208 | - | 351 | WP_000589165.1 | hypothetical protein | - |
| NLG45_RS08030 (NLG45_08030) | 1609266..1609721 | - | 456 | WP_031883909.1 | Ig-like domain-containing protein | - |
| NLG45_RS08035 (NLG45_08035) | 1609813..1610454 | - | 642 | WP_000807536.1 | phage tail protein | - |
| NLG45_RS08040 (NLG45_08040) | 1610489..1610884 | - | 396 | WP_001636966.1 | DUF3168 domain-containing protein | - |
| NLG45_RS08045 (NLG45_08045) | 1610885..1611286 | - | 402 | WP_000110019.1 | hypothetical protein | - |
| NLG45_RS08050 (NLG45_08050) | 1611283..1611615 | - | 333 | WP_000395499.1 | hypothetical protein | - |
| NLG45_RS08055 (NLG45_08055) | 1611627..1611905 | - | 279 | WP_031883908.1 | head-tail connector protein | - |
| NLG45_RS08060 (NLG45_08060) | 1611974..1613137 | - | 1164 | WP_031886317.1 | phage major capsid protein | - |
| NLG45_RS08065 (NLG45_08065) | 1613149..1613922 | - | 774 | WP_031886316.1 | Clp protease ClpP | - |
| NLG45_RS08070 (NLG45_08070) | 1613906..1615144 | - | 1239 | WP_001100669.1 | phage portal protein | - |
| NLG45_RS08075 (NLG45_08075) | 1615149..1616840 | - | 1692 | WP_031886315.1 | terminase large subunit | - |
| NLG45_RS08080 (NLG45_08080) | 1616830..1617135 | - | 306 | WP_000778933.1 | P27 family phage terminase small subunit | - |
| NLG45_RS08085 (NLG45_08085) | 1617263..1617577 | - | 315 | WP_015978060.1 | HNH endonuclease | - |
| NLG45_RS08090 (NLG45_08090) | 1617734..1618171 | - | 438 | WP_031883903.1 | transcriptional regulator | - |
| NLG45_RS08095 (NLG45_08095) | 1618184..1619551 | - | 1368 | WP_078098969.1 | DEAD/DEAH box helicase | - |
| NLG45_RS08100 (NLG45_08100) | 1619532..1619822 | - | 291 | WP_000665205.1 | VRR-NUC domain-containing protein | - |
| NLG45_RS08105 (NLG45_08105) | 1619956..1620060 | + | 105 | WP_078098968.1 | hypothetical protein | - |
| NLG45_RS08110 (NLG45_08110) | 1620162..1622609 | - | 2448 | WP_031883900.1 | virulence-associated E family protein | - |
| NLG45_RS08115 (NLG45_08115) | 1622661..1622861 | - | 201 | WP_000265258.1 | DUF1514 family protein | - |
| NLG45_RS08120 (NLG45_08120) | 1622929..1623081 | - | 153 | WP_000595263.1 | transcriptional activator RinB | - |
| NLG45_RS08125 (NLG45_08125) | 1623078..1623464 | - | 387 | WP_000592219.1 | hypothetical protein | - |
| NLG45_RS08130 (NLG45_08130) | 1623461..1623667 | - | 207 | WP_000195812.1 | DUF1381 domain-containing protein | - |
| NLG45_RS08135 (NLG45_08135) | 1623704..1624231 | - | 528 | WP_031883899.1 | dUTPase | - |
| NLG45_RS08140 (NLG45_08140) | 1624246..1624407 | - | 162 | WP_180991751.1 | hypothetical protein | - |
| NLG45_RS08145 (NLG45_08145) | 1624408..1624689 | - | 282 | WP_000454994.1 | hypothetical protein | - |
| NLG45_RS08150 (NLG45_08150) | 1624690..1624863 | - | 174 | WP_000028424.1 | hypothetical protein | Antitoxin Detail |
| NLG45_RS08155 (NLG45_08155) | 1624853..1625104 | - | 252 | WP_031883898.1 | DUF1024 family protein | Toxin Detail |
| NLG45_RS08160 (NLG45_08160) | 1625097..1625381 | - | 285 | WP_031883897.1 | hypothetical protein | - |
| NLG45_RS08165 (NLG45_08165) | 1625378..1625815 | - | 438 | WP_031796778.1 | YopX family protein | - |
| NLG45_RS08170 (NLG45_08170) | 1625812..1626006 | - | 195 | WP_031794818.1 | hypothetical protein | - |
| NLG45_RS08175 (NLG45_08175) | 1626003..1626410 | - | 408 | WP_000695771.1 | hypothetical protein | - |
| NLG45_RS08180 (NLG45_08180) | 1626413..1626619 | - | 207 | WP_000693993.1 | hypothetical protein | - |
| NLG45_RS08185 (NLG45_08185) | 1626634..1626882 | - | 249 | WP_000178883.1 | phi PVL orf 51-like protein | - |
| NLG45_RS08190 (NLG45_08190) | 1626891..1627091 | - | 201 | WP_031796775.1 | hypothetical protein | - |
| NLG45_RS08195 (NLG45_08195) | 1627094..1627351 | - | 258 | WP_000111488.1 | DUF3310 domain-containing protein | - |
| NLG45_RS08200 (NLG45_08200) | 1627351..1627752 | - | 402 | WP_000113981.1 | PVL family protein | - |
| NLG45_RS08205 (NLG45_08205) | 1627752..1627937 | - | 186 | WP_001164628.1 | DUF3113 family protein | - |
| NLG45_RS08210 (NLG45_08210) | 1627950..1629902 | - | 1953 | WP_078055733.1 | DNA polymerase | - |
| NLG45_RS08215 (NLG45_08215) | 1629970..1630524 | - | 555 | WP_000647288.1 | DUF2815 family protein | - |
| NLG45_RS08220 (NLG45_08220) | 1630551..1631717 | - | 1167 | WP_031883894.1 | DUF2800 domain-containing protein | - |
| NLG45_RS08225 (NLG45_08225) | 1631714..1632076 | - | 363 | WP_031775157.1 | hypothetical protein | - |
| NLG45_RS08230 (NLG45_08230) | 1632091..1632414 | - | 324 | WP_000174994.1 | hypothetical protein | - |
| NLG45_RS08235 (NLG45_08235) | 1632493..1632654 | - | 162 | WP_001285948.1 | DUF1270 domain-containing protein | - |
| NLG45_RS08240 (NLG45_08240) | 1632667..1632930 | - | 264 | WP_001124160.1 | IS3 family transposase ISVa4 | Transposase |
| NLG45_RS08245 (NLG45_08245) | 1632955..1633170 | - | 216 | WP_001097552.1 | hypothetical protein | - |
| NLG45_RS08250 (NLG45_08250) | 1633225..1633590 | + | 366 | WP_001128433.1 | hypothetical protein | Antitoxin Detail |
| NLG45_RS08255 (NLG45_08255) | 1633559..1633804 | - | 246 | WP_001025401.1 | DUF2829 domain-containing protein | Toxin Detail |
| NLG45_RS08260 (NLG45_08260) | 1633860..1634069 | + | 210 | WP_000642492.1 | hypothetical protein | - |
| NLG45_RS08265 (NLG45_08265) | 1634059..1634202 | - | 144 | WP_000939498.1 | hypothetical protein | - |
| NLG45_RS08270 (NLG45_08270) | 1634231..1635007 | - | 777 | WP_031914835.1 | Rha family transcriptional regulator | - |
| NLG45_RS08275 (NLG45_08275) | 1635046..1635255 | - | 210 | WP_001114715.1 | helix-turn-helix transcriptional regulator | - |
| NLG45_RS08280 (NLG45_08280) | 1635418..1635744 | + | 327 | WP_000455972.1 | helix-turn-helix transcriptional regulator | - |
| NLG45_RS08285 (NLG45_08285) | 1635766..1636224 | + | 459 | WP_113532524.1 | toxin | - |
| NLG45_RS08290 (NLG45_08290) | 1636242..1636676 | + | 435 | WP_000755721.1 | hypothetical protein | - |
| NLG45_RS08295 (NLG45_08295) | 1636705..1637100 | + | 396 | WP_000449655.1 | hypothetical protein | - |
| NLG45_RS08300 (NLG45_08300) | 1637298..1637699 | - | 402 | WP_223250915.1 | hypothetical protein | - |
| NLG45_RS08305 (NLG45_08305) | 1638031..1639236 | + | 1206 | WP_031883891.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| NLG45_RS08310 (NLG45_08310) | 1639330..1641264 | - | 1935 | Protein_1626 | hypothetical protein | VF |
| NLG45_RS08315 (NLG45_08315) | 1641682..1642995 | + | 1314 | WP_254414271.1 | YjiH family protein | - |
| NLG45_RS08320 (NLG45_08320) | 1643122..1643790 | - | 669 | WP_000936720.1 | N-acetylmannosamine-6-phosphate 2-epimerase | - |
| NLG45_RS08325 (NLG45_08325) | 1643930..1644730 | + | 801 | WP_000667382.1 | MurR/RpiR family transcriptional regulator | - |
| NLG45_RS08330 (NLG45_08330) | 1645008..1645868 | - | 861 | WP_000291439.1 | ROK family protein | - |
| NLG45_RS08335 (NLG45_08335) | 1646026..1646907 | + | 882 | WP_001030738.1 | N-acetylneuraminate lyase | - |
| NLG45_RS08340 (NLG45_08340) | 1646947..1648479 | + | 1533 | WP_000665722.1 | sodium:solute symporter | - |
| NLG45_RS08345 (NLG45_08345) | 1648584..1649804 | - | 1221 | WP_001022969.1 | NupC/NupG family nucleoside CNT transporter | - |
| NLG45_RS08350 (NLG45_08350) | 1649815..1650738 | - | 924 | WP_000002057.1 | pseudouridine-5'-phosphate glycosidase | - |
| NLG45_RS08355 (NLG45_08355) | 1650713..1651831 | - | 1119 | WP_001283968.1 | winged helix-turn-helix transcriptional regulator | - |
| NLG45_RS08360 (NLG45_08360) | 1652175..1653164 | - | 990 | WP_001822575.1 | PTS sugar transporter subunit IIC | - |
| NLG45_RS08365 (NLG45_08365) | 1653115..1653255 | + | 141 | WP_011446983.1 | hypothetical protein | - |
| NLG45_RS08370 (NLG45_08370) | 1653414..1654091 | - | 678 | WP_000911017.1 | ABC transporter ATP-binding protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|