MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 169201 bp
Accession: NZ_CP100246 Location: 1..169201 Organism: Burkholderia glumae strain BGR28S Replicon: plasmid p28s1p
Accession: NZ_CP100246 Location: 1..169201 Organism: Burkholderia glumae strain BGR28S Replicon: plasmid p28s1p
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NIX71_RS29390 | 101..790 | + | 690 | WP_012732801.1 | ParA family partition ATPase | - |
| NIX71_RS29395 | 826..1827 | + | 1002 | WP_167539780.1 | ParB/RepB/Spo0J family partition protein | - |
| NIX71_RS29400 | 2554..3417 | + | 864 | WP_012732803.1 | plasmid replication initiator TrfA | - |
| NIX71_RS29405 | 4413..5993 | - | 1581 | WP_209954646.1 | IS66 family transposase ISAeh1 | Transposase |
| NIX71_RS29410 | 6024..6377 | - | 354 | WP_257804587.1 | IS66 family transposase ISBmu30 | Transposase |
| NIX71_RS29415 | 6353..6883 | - | 531 | WP_257806136.1 | IS66 family transposase ISRtr5 | Transposase |
| NIX71_RS29420 | 7433..7843 | - | 411 | WP_148271087.1 | hypothetical protein | - |
| NIX71_RS29425 | 8221..8940 | + | 720 | WP_176359140.1 | translesion DNA synthesis-associated protein ImuA | - |
| NIX71_RS29430 | 8858..10336 | + | 1479 | WP_257825019.1 | DNA polymerase Y family protein | - |
| NIX71_RS29435 | 10364..12970 | + | 2607 | WP_257825021.1 | error-prone DNA polymerase | - |
| NIX71_RS29440 | 12997..13863 | - | 867 | WP_012732871.1 | IS21 family transposase ISBcen28 | Transposase |
| NIX71_RS29445 | 13860..15116 | - | 1257 | WP_012734039.1 | IS21 family transposase ISBcen28 | Transposase |
| NIX71_RS29450 | 15243..15809 | + | 567 | Protein_12 | error-prone DNA polymerase | - |
| NIX71_RS29455 | 15822..16109 | + | 288 | WP_153479215.1 | hypothetical protein | - |
| NIX71_RS29460 | 16210..16452 | - | 243 | WP_012734062.1 | hypothetical protein | - |
| NIX71_RS29465 | 16468..16836 | - | 369 | WP_257825024.1 | hypothetical protein | - |
| NIX71_RS29470 | 16847..17281 | - | 435 | WP_237657892.1 | hypothetical protein | - |
| NIX71_RS29475 | 18035..18334 | - | 300 | WP_251107943.1 | hypothetical protein | - |
| NIX71_RS29480 | 18716..20431 | - | 1716 | WP_161522116.1 | hypothetical protein | VF |
| NIX71_RS31665 | 20608..22179 | - | 1572 | WP_275990976.1 | hypothetical protein | VF |
| NIX71_RS29490 | 22273..23070 | - | 798 | WP_012732720.1 | IS21 family transposase ISPa65 | Transposase |
| NIX71_RS29495 | 23063..24568 | - | 1506 | WP_012732721.1 | IS21 family transposase ISAlisp1 | Transposase |
| NIX71_RS29500 | 24682..25062 | - | 381 | Protein_22 | low affinity iron permease family protein | - |
| NIX71_RS29505 | 25348..25791 | - | 444 | WP_153479209.1 | Sensor histidine kinase RcsC | VF |
| NIX71_RS29510 | 26299..26709 | + | 411 | WP_012732719.1 | manganese catalase family protein | - |
| NIX71_RS29515 | 26642..26842 | - | 201 | Protein_25 | DUF892 family protein | - |
| NIX71_RS29520 | 27080..28432 | + | 1353 | WP_012732718.1 | Luminescence regulatory protein LuxO | VF |
| NIX71_RS29525 | 28802..29530 | - | 729 | WP_012732717.1 | IS6 family transposase ISDge13 | Transposase |
| NIX71_RS29530 | 29576..30097 | - | 522 | WP_232252320.1 | hypothetical protein | VF |
| NIX71_RS29535 | 30171..30848 | - | 678 | WP_012732715.1 | hypothetical protein | - |
| NIX71_RS29540 | 31236..32041 | - | 806 | Protein_30 | IS5 family transposase IS1421 | Transposase |
| NIX71_RS29545 | 32222..32629 | - | 408 | WP_232252319.1 | hypothetical protein | - |
| NIX71_RS29550 | 32822..33639 | + | 818 | WP_085962419.1 | IS5 family transposase ISBugl2 | Transposase |
| NIX71_RS29555 | 33649..35484 | - | 1836 | WP_257825038.1 | site-specific integrase | - |
| NIX71_RS29560 | 35487..35828 | - | 342 | WP_012732710.1 | hypothetical protein | - |
| NIX71_RS29565 | 35885..36130 | - | 246 | WP_127913916.1 | hypothetical protein | - |
| NIX71_RS29570 | 36127..36369 | - | 243 | WP_124837682.1 | hypothetical protein | - |
| NIX71_RS29575 | 36383..36667 | - | 285 | WP_017432347.1 | hypothetical protein | - |
| NIX71_RS29580 | 37074..37562 | - | 489 | WP_012732893.1 | GNAT family N-acetyltransferase | - |
| NIX71_RS29585 | 37559..37828 | - | 270 | WP_012732894.1 | DUF1778 domain-containing protein | - |
| NIX71_RS29590 | 38035..38220 | - | 186 | WP_017432348.1 | hypothetical protein | - |
| NIX71_RS29595 | 38705..39307 | + | 603 | WP_127913917.1 | hypothetical protein | - |
| NIX71_RS29600 | 39986..40630 | + | 645 | WP_017432350.1 | AAA family ATPase | - |
| NIX71_RS29605 | 40633..41670 | + | 1038 | WP_017432351.1 | ParB/RepB/Spo0J family partition protein | - |
| NIX71_RS29610 | 41755..42489 | - | 735 | WP_257825040.1 | replication initiation protein | - |
| NIX71_RS29620 | 43343..43927 | - | 585 | WP_257825026.1 | RepB family plasmid replication initiator protein | - |
| NIX71_RS29625 | 45456..46355 | - | 900 | WP_017432353.1 | Crp/Fnr family transcriptional regulator | - |
| NIX71_RS29630 | 46773..48110 | - | 1338 | WP_017432354.1 | DUF1173 domain-containing protein | - |
| NIX71_RS29635 | 48125..48529 | - | 405 | WP_012732806.1 | hypothetical protein | - |
| NIX71_RS29640 | 48541..49194 | - | 654 | WP_012732807.1 | hypothetical protein | - |
| NIX71_RS29645 | 49211..53482 | - | 4272 | WP_257825028.1 | Autotransporter adhesin SadA | VF |
| NIX71_RS29650 | 53607..54230 | - | 624 | WP_080942733.1 | hypothetical protein | - |
| NIX71_RS29655 | 54227..54544 | - | 318 | WP_012735271.1 | hypothetical protein | - |
| NIX71_RS29660 | 54541..55026 | - | 486 | WP_257825030.1 | protein-disulfide reductase DsbD N-terminal domain-containing protein | - |
| NIX71_RS29665 | 55023..55454 | - | 432 | WP_017432893.1 | hypothetical protein | - |
| NIX71_RS29670 | 55611..56009 | - | 399 | WP_012732812.1 | outer membrane protein assembly factor BamE | - |
| NIX71_RS29675 | 56054..56473 | - | 420 | WP_257825032.1 | hypothetical protein | - |
| NIX71_RS29680 | 56484..58583 | - | 2100 | WP_161522040.1 | zeta toxin family protein | - |
| NIX71_RS29685 | 58595..58843 | - | 249 | WP_237657885.1 | hypothetical protein | - |
| NIX71_RS29690 | 58882..59511 | - | 630 | WP_039201915.1 | hypothetical protein | VF |
| NIX71_RS29695 | 59769..60155 | + | 387 | WP_161522042.1 | hypothetical protein | - |
| NIX71_RS29700 | 60200..63661 | - | 3462 | WP_257820527.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| NIX71_RS29705 | 63664..65109 | - | 1446 | WP_012735278.1 | conjugal transfer protein TraH | - |
| NIX71_RS29710 | 65106..66149 | - | 1044 | WP_080630308.1 | hypothetical protein | - |
| NIX71_RS29715 | 66149..66961 | - | 813 | WP_161522046.1 | conjugal transfer protein TraF | - |
| NIX71_RS29720 | 67071..67547 | - | 477 | WP_161522047.1 | hypothetical protein | - |
| NIX71_RS29725 | 67571..67978 | - | 408 | WP_012735281.1 | hypothetical protein | - |
| NIX71_RS29730 | 67975..69240 | - | 1266 | WP_012735282.1 | conjugal transfer protein TraN | - |
| NIX71_RS29735 | 69237..70535 | - | 1299 | WP_012735283.1 | hypothetical protein | - |
| NIX71_RS29740 | 70535..71326 | - | 792 | WP_254985253.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| NIX71_RS29745 | 71323..72300 | - | 978 | WP_085967326.1 | conjugal transfer pilus assembly protein TraU | - |
| NIX71_RS29750 | 72351..73295 | - | 945 | WP_045678692.1 | hypothetical protein | - |
| NIX71_RS29755 | 73362..73970 | - | 609 | WP_045678693.1 | type-F conjugative transfer system protein TraW | - |
| NIX71_RS29760 | 74009..74332 | - | 324 | WP_017925012.1 | hypothetical protein | - |
| NIX71_RS29765 | 74398..74898 | - | 501 | WP_012735288.1 | S26 family signal peptidase | - |
| NIX71_RS29770 | 74895..75266 | - | 372 | WP_161522052.1 | TrbI F-type domain-containing protein | - |
| NIX71_RS29775 | 75263..77863 | - | 2601 | WP_161522053.1 | type IV secretion system protein TraC | - |
| NIX71_RS29780 | 77877..78575 | - | 699 | WP_254985246.1 | type IV conjugative transfer system lipoprotein TraV | - |
| NIX71_RS29785 | 78578..79486 | - | 909 | WP_254985244.1 | DsbC family protein | - |
| NIX71_RS29790 | 79494..80450 | - | 957 | WP_254985242.1 | phage Gp37/Gp68 family protein | - |
| NIX71_RS29795 | 80527..81615 | - | 1089 | WP_052690848.1 | hypothetical protein | - |
| NIX71_RS29800 | 81608..82945 | - | 1338 | WP_045678715.1 | TrbI/VirB10 family protein | - |
| NIX71_RS29805 | 82938..83678 | - | 741 | WP_017432611.1 | type-F conjugative transfer system secretin TraK | - |
| NIX71_RS29810 | 83675..84286 | - | 612 | WP_012732836.1 | type IV conjugative transfer system protein TraE | - |
| NIX71_RS29815 | 84291..84578 | - | 288 | WP_017432612.1 | type IV conjugative transfer system protein TraL | - |
| NIX71_RS29820 | 84588..84977 | - | 390 | WP_012735295.1 | hypothetical protein | - |
| NIX71_RS29825 | 85560..86051 | - | 492 | WP_020381403.1 | hypothetical protein | VF |
| NIX71_RS29830 | 87371..88575 | + | 1205 | WP_085962358.1 | IS3 family transposase IS1417 | Transposase |
| NIX71_RS29835 | 88595..89407 | - | 813 | WP_257824998.1 | LysR family transcriptional regulator | - |
| NIX71_RS29840 | 89576..89917 | + | 342 | WP_012732843.1 | DUF485 domain-containing protein | - |
| NIX71_RS29845 | 89907..91763 | + | 1857 | WP_012732844.1 | cation acetate symporter | - |
| NIX71_RS29850 | 91789..92823 | + | 1035 | WP_080569434.1 | carbon-nitrogen hydrolase family protein | - |
| NIX71_RS29855 | 93007..93714 | + | 708 | WP_012732846.1 | Transcriptional activator protein AnoR | VF |
| NIX71_RS29860 | 94028..98713 | + | 4686 | WP_257825000.1 | hypothetical protein | VF |
| NIX71_RS29865 | 98710..99036 | + | 327 | WP_155297030.1 | hypothetical protein | - |
| NIX71_RS29870 | 99055..99546 | + | 492 | Protein_96 | RHS repeat-associated core domain-containing protein | - |
| NIX71_RS29875 | 99549..99893 | + | 345 | WP_155297029.1 | hypothetical protein | - |
| NIX71_RS29880 | 99954..100235 | + | 282 | WP_155297028.1 | DUF2750 domain-containing protein | - |
| NIX71_RS29885 | 100269..101309 | + | 1041 | WP_039203517.1 | DNA cytosine methyltransferase | - |
| NIX71_RS29890 | 101319..103325 | + | 2007 | WP_080763651.1 | ATP-binding protein | - |
| NIX71_RS29900 | 104791..105744 | + | 954 | WP_039205200.1 | hypothetical protein | - |
| NIX71_RS29905 | 105797..106602 | + | 806 | WP_257820499.1 | IS5 family transposase IS1421 | Transposase |
| NIX71_RS29910 | 106819..107100 | + | 282 | WP_039204507.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| NIX71_RS29915 | 107097..107591 | + | 495 | WP_039204503.1 | GNAT family N-acetyltransferase | Toxin Detail |
| NIX71_RS29920 | 107684..108154 | + | 471 | WP_080763678.1 | ProQ/FINO family protein | - |
| NIX71_RS29925 | 108244..111165 | - | 2922 | WP_257758109.1 | ATP-dependent RecD-like DNA helicase | Relaxase |
| NIX71_RS29930 | 111175..113241 | - | 2067 | WP_039204005.1 | type IV secretion system DNA-binding domain-containing protein | - |
| NIX71_RS29935 | 113234..113680 | - | 447 | WP_080763665.1 | hypothetical protein | - |
| NIX71_RS29940 | 114208..114510 | - | 303 | WP_257825007.1 | hypothetical protein | - |
| NIX71_RS29945 | 115858..116139 | + | 282 | WP_176359118.1 | hypothetical protein | - |
| NIX71_RS29955 | 116328..116501 | - | 174 | WP_176359117.1 | hypothetical protein | - |
| NIX71_RS29960 | 116556..116933 | - | 378 | WP_257825009.1 | hypothetical protein | - |
| NIX71_RS29965 | 116990..117262 | - | 273 | WP_209954658.1 | hypothetical protein | - |
| NIX71_RS29970 | 117277..117567 | - | 291 | WP_237657871.1 | hypothetical protein | - |
| NIX71_RS29975 | 118362..120599 | - | 2238 | WP_257825011.1 | ParB N-terminal domain-containing protein | - |
| NIX71_RS29980 | 121175..121360 | - | 186 | WP_257825013.1 | hypothetical protein | - |
| NIX71_RS29985 | 121594..122100 | - | 507 | WP_251119195.1 | hypothetical protein | - |
| NIX71_RS29990 | 122122..122778 | - | 657 | WP_257825015.1 | DNA methyltransferase | - |
| NIX71_RS29995 | 123648..124109 | - | 462 | WP_153479264.1 | hypothetical protein | - |
| NIX71_RS30000 | 124172..124828 | - | 657 | WP_153479262.1 | hypothetical protein | - |
| NIX71_RS30005 | 124894..125373 | - | 480 | WP_251119197.1 | hypothetical protein | - |
| NIX71_RS30010 | 126158..126631 | + | 474 | WP_194290243.1 | hypothetical protein | - |
| NIX71_RS30015 | 126776..128029 | + | 1254 | WP_251119198.1 | hypothetical protein | - |
| NIX71_RS30020 | 128283..128768 | + | 486 | Protein_125 | ISNCY family transposase ISRel10 | Transposase |
| NIX71_RS30025 | 129034..130680 | + | 1647 | WP_193373183.1 | hypothetical protein | - |
| NIX71_RS30030 | 131345..131755 | - | 411 | WP_148271087.1 | hypothetical protein | - |
| NIX71_RS30035 | 132133..132852 | + | 720 | WP_176359140.1 | translesion DNA synthesis-associated protein ImuA | - |
| NIX71_RS30040 | 132770..134248 | + | 1479 | WP_012735329.1 | DNA polymerase Y family protein | - |
| NIX71_RS30045 | 134255..137404 | + | 3150 | WP_012735330.1 | error-prone DNA polymerase | - |
| NIX71_RS30050 | 137417..137704 | + | 288 | WP_012735331.1 | hypothetical protein | - |
| NIX71_RS30055 | 138251..139345 | - | 1095 | WP_012735332.1 | BsuBI/PstI family type II restriction endonuclease | - |
| NIX71_RS30060 | 139348..141141 | - | 1794 | WP_012735333.1 | Eco57I restriction-modification methylase domain-containing protein | - |
| NIX71_RS30065 | 141145..141381 | - | 237 | WP_012735334.1 | helix-turn-helix transcriptional regulator | - |
| NIX71_RS30070 | 141588..142316 | + | 729 | WP_257804669.1 | IS6 family transposase ISDge13 | Transposase |
| NIX71_RS30075 | 142455..142931 | + | 477 | WP_012734051.1 | IS66 family transposase ISRtr5 | Transposase |
| NIX71_RS30080 | 142907..143257 | + | 351 | WP_012732753.1 | IS66 family transposase ISBmu30 | Transposase |
| NIX71_RS30085 | 143289..144845 | + | 1557 | WP_012732752.1 | IS66 family transposase ISAeh1 | Transposase |
| NIX71_RS30090 | 144959..145210 | - | 252 | WP_012735336.1 | hypothetical protein | VF |
| NIX71_RS30095 | 145223..145759 | - | 537 | WP_012735337.1 | hypothetical protein | - |
| NIX71_RS30100 | 145767..146402 | - | 636 | WP_167539782.1 | hypothetical protein | - |
| NIX71_RS30105 | 146414..146665 | - | 252 | WP_012735338.1 | hypothetical protein | VF |
| NIX71_RS30110 | 146678..147340 | - | 663 | WP_012735339.1 | hypothetical protein | - |
| NIX71_RS30115 | 147337..150180 | - | 2844 | WP_012735340.1 | glycosyl hydrolase 108 family protein | - |
| NIX71_RS30120 | 150233..152740 | - | 2508 | WP_012735341.1 | type VI secretion system Vgr family protein | - |
| NIX71_RS30125 | 153147..153875 | - | 729 | WP_012735342.1 | IS6 family transposase ISDge13 | Transposase |
| NIX71_RS30130 | 154342..155025 | + | 684 | WP_043308718.1 | hypothetical protein | - |
| NIX71_RS30135 | 155022..156533 | + | 1512 | WP_050811485.1 | hypothetical protein | - |
| NIX71_RS30140 | 156619..156888 | + | 270 | WP_012735343.1 | hypothetical protein | - |
| NIX71_RS30145 | 157048..157662 | + | 615 | Protein_150 | error-prone DNA polymerase | - |
| NIX71_RS30150 | 157678..157965 | + | 288 | WP_012735344.1 | hypothetical protein | - |
| NIX71_RS30155 | 159069..159263 | - | 195 | WP_124837731.1 | hypothetical protein | - |
| NIX71_RS30160 | 159318..159560 | - | 243 | WP_012735345.1 | hypothetical protein | - |
| NIX71_RS30165 | 159578..160141 | - | 564 | WP_012735346.1 | hypothetical protein | - |
| NIX71_RS30170 | 160156..160557 | - | 402 | WP_012735347.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| NIX71_RS30175 | 160557..160793 | - | 237 | WP_012735348.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| NIX71_RS30180 | 161130..161822 | - | 693 | WP_043308722.1 | hypothetical protein | - |
| NIX71_RS30185 | 161906..163732 | - | 1827 | WP_012735349.1 | site-specific integrase | - |
| NIX71_RS30190 | 163729..164109 | - | 381 | WP_080569442.1 | hypothetical protein | - |
| NIX71_RS30195 | 164112..164429 | - | 318 | WP_050811486.1 | hypothetical protein | - |
| NIX71_RS30200 | 164480..165568 | - | 1089 | Protein_161 | hypothetical protein | - |
| NIX71_RS30205 | 165579..165842 | - | 264 | WP_148271091.1 | hypothetical protein | - |
| NIX71_RS30210 | 165892..166125 | - | 234 | WP_043308726.1 | hypothetical protein | - |
| NIX71_RS30215 | 166132..166428 | - | 297 | WP_043308728.1 | hypothetical protein | - |
| NIX71_RS30220 | 166593..166793 | - | 201 | WP_012735350.1 | hypothetical protein | - |
| NIX71_RS30225 | 166865..166972 | - | 108 | Protein_166 | VapC toxin family PIN domain ribonuclease | - |
| NIX71_RS30230 | 167739..168707 | + | 969 | WP_148271092.1 | hypothetical protein | - |
| NIX71_RS30235 | 168779..168964 | - | 186 | WP_148271081.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|