MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 172554 bp
Accession: NZ_CP100184 Location: 1..172554 Organism: Burkholderia glumae strain R5 Replicon: plasmid pR52p
Accession: NZ_CP100184 Location: 1..172554 Organism: Burkholderia glumae strain R5 Replicon: plasmid pR52p
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NIW68_RS30040 | 101..787 | + | 687 | WP_252836642.1 | ParA family partition ATPase | - |
| NIW68_RS30045 | 784..1857 | + | 1074 | WP_257804608.1 | ParB/RepB/Spo0J family partition protein | - |
| NIW68_RS30050 | 2949..3782 | + | 834 | WP_252836644.1 | replication initiation protein | - |
| NIW68_RS30055 | 4879..5778 | - | 900 | WP_257806668.1 | Crp/Fnr family transcriptional regulator | - |
| NIW68_RS30060 | 6194..7531 | - | 1338 | WP_017424105.1 | DUF1173 domain-containing protein | - |
| NIW68_RS30065 | 7546..7950 | - | 405 | WP_017424104.1 | hypothetical protein | - |
| NIW68_RS30070 | 7962..8630 | - | 669 | WP_017424103.1 | hypothetical protein | - |
| NIW68_RS30075 | 8647..13362 | - | 4716 | WP_257806673.1 | Autotransporter adhesin SadA | VF |
| NIW68_RS30080 | 13487..14110 | - | 624 | WP_080942733.1 | hypothetical protein | - |
| NIW68_RS30085 | 14107..14424 | - | 318 | WP_012735271.1 | hypothetical protein | - |
| NIW68_RS30090 | 14421..14864 | - | 444 | WP_257806676.1 | protein-disulfide reductase DsbD N-terminal domain-containing protein | - |
| NIW68_RS30095 | 14903..15334 | - | 432 | WP_043308689.1 | hypothetical protein | - |
| NIW68_RS30100 | 15490..15888 | - | 399 | WP_012732812.1 | outer membrane protein assembly factor BamE | - |
| NIW68_RS30105 | 15933..16352 | - | 420 | WP_012732813.1 | hypothetical protein | - |
| NIW68_RS30110 | 16363..18462 | - | 2100 | WP_257806678.1 | zeta toxin family protein | - |
| NIW68_RS30115 | 18474..18722 | - | 249 | WP_237657897.1 | hypothetical protein | - |
| NIW68_RS30120 | 18761..19390 | - | 630 | WP_257820145.1 | hypothetical protein | VF |
| NIW68_RS30125 | 19648..20034 | + | 387 | WP_012735276.1 | hypothetical protein | - |
| NIW68_RS30130 | 20082..21713 | - | 1632 | WP_254220811.1 | hypothetical protein | - |
| NIW68_RS30135 | 21656..23536 | - | 1881 | WP_257820147.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| NIW68_RS30140 | 23539..24984 | - | 1446 | WP_257806686.1 | conjugal transfer protein TraH | - |
| NIW68_RS30145 | 24981..25259 | - | 279 | WP_257820149.1 | hypothetical protein | - |
| NIW68_RS30150 | 25256..26023 | - | 768 | WP_257820152.1 | hypothetical protein | - |
| NIW68_RS30155 | 26023..26805 | - | 783 | WP_257806709.1 | conjugal transfer protein TraF | - |
| NIW68_RS30160 | 26829..27224 | - | 396 | WP_017432465.1 | hypothetical protein | - |
| NIW68_RS30165 | 27248..27655 | - | 408 | WP_012732821.1 | hypothetical protein | - |
| NIW68_RS30170 | 27652..28917 | - | 1266 | WP_257806690.1 | conjugal transfer protein TraN | - |
| NIW68_RS30175 | 28914..30212 | - | 1299 | WP_251119180.1 | hypothetical protein | - |
| NIW68_RS30180 | 30212..31003 | - | 792 | WP_257806617.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| NIW68_RS30185 | 31000..31977 | - | 978 | WP_085962455.1 | conjugal transfer pilus assembly protein TraU | - |
| NIW68_RS30190 | 32028..32972 | - | 945 | WP_257806619.1 | hypothetical protein | - |
| NIW68_RS30195 | 33039..33677 | - | 639 | WP_257806621.1 | type-F conjugative transfer system protein TraW | - |
| NIW68_RS30200 | 33691..34191 | - | 501 | WP_012735288.1 | S26 family signal peptidase | - |
| NIW68_RS30205 | 34188..34559 | - | 372 | WP_257820156.1 | hypothetical protein | - |
| NIW68_RS30210 | 34556..37153 | - | 2598 | WP_257820158.1 | type IV secretion system protein TraC | - |
| NIW68_RS30215 | 37167..37865 | - | 699 | WP_045678694.1 | type IV conjugative transfer system lipoprotein TraV | - |
| NIW68_RS30220 | 37868..38776 | - | 909 | WP_017432608.1 | DsbC family protein | - |
| NIW68_RS30225 | 38784..39740 | - | 957 | WP_017432609.1 | phage Gp37/Gp68 family protein | - |
| NIW68_RS30230 | 39817..40905 | - | 1089 | WP_257806626.1 | hypothetical protein | - |
| NIW68_RS30235 | 40898..42235 | - | 1338 | WP_039202662.1 | TrbI/VirB10 family protein | - |
| NIW68_RS30240 | 42228..42968 | - | 741 | WP_012732835.1 | type-F conjugative transfer system secretin TraK | - |
| NIW68_RS30245 | 42965..43576 | - | 612 | WP_012732836.1 | type IV conjugative transfer system protein TraE | - |
| NIW68_RS30250 | 43581..43868 | - | 288 | WP_012732837.1 | type IV conjugative transfer system protein TraL | - |
| NIW68_RS30255 | 43878..44267 | - | 390 | WP_012735295.1 | hypothetical protein | - |
| NIW68_RS30260 | 44850..45341 | - | 492 | WP_020381403.1 | hypothetical protein | VF |
| NIW68_RS30265 | 46243..46857 | + | 615 | WP_251107990.1 | helix-turn-helix transcriptional regulator | - |
| NIW68_RS30270 | 46854..47711 | - | 858 | WP_257744805.1 | hypothetical protein | - |
| NIW68_RS30275 | 47848..48606 | - | 759 | WP_251107992.1 | aspartate/glutamate racemase family protein | - |
| NIW68_RS30280 | 48644..49942 | - | 1299 | WP_251107993.1 | MFS transporter | - |
| NIW68_RS30285 | 50109..50801 | + | 693 | WP_251107994.1 | GntR family transcriptional regulator | - |
| NIW68_RS30290 | 51079..52125 | - | 1047 | WP_012734099.1 | IS481 family transposase IS1419 | Transposase |
| NIW68_RS30295 | 52363..57009 | + | 4647 | WP_257806630.1 | RHS repeat-associated core domain-containing protein | - |
| NIW68_RS30300 | 57012..57428 | + | 417 | WP_012732848.1 | SMI1/KNR4 family protein | - |
| NIW68_RS30305 | 57484..57579 | + | 96 | Protein_53 | GNAT family N-acetyltransferase | - |
| NIW68_RS30310 | 57672..58142 | + | 471 | WP_012732850.1 | ProQ/FINO family protein | - |
| NIW68_RS30315 | 58232..61153 | - | 2922 | WP_257806632.1 | ATP-dependent RecD-like DNA helicase | Relaxase |
| NIW68_RS30320 | 61163..63229 | - | 2067 | WP_257806634.1 | type IV secretion system DNA-binding domain-containing protein | - |
| NIW68_RS30325 | 63222..63671 | - | 450 | WP_012735303.1 | hypothetical protein | - |
| NIW68_RS30330 | 65872..66153 | + | 282 | WP_176359118.1 | hypothetical protein | - |
| NIW68_RS30340 | 66342..66515 | - | 174 | WP_176359117.1 | hypothetical protein | - |
| NIW68_RS30345 | 66570..66947 | - | 378 | WP_257758112.1 | hypothetical protein | - |
| NIW68_RS30350 | 67005..67277 | - | 273 | WP_012732855.1 | hypothetical protein | - |
| NIW68_RS30355 | 67292..67582 | - | 291 | WP_237657871.1 | hypothetical protein | - |
| NIW68_RS30360 | 68376..70612 | - | 2237 | Protein_63 | ParB/RepB/Spo0J family partition protein | - |
| NIW68_RS30365 | 71083..71250 | - | 168 | WP_257820160.1 | hypothetical protein | - |
| NIW68_RS30370 | 71253..71420 | - | 168 | WP_017433877.1 | hypothetical protein | - |
| NIW68_RS30375 | 71751..72257 | - | 507 | WP_257820162.1 | hypothetical protein | - |
| NIW68_RS30380 | 72282..72933 | - | 652 | Protein_67 | DNA methyltransferase | - |
| NIW68_RS30385 | 73669..74496 | - | 828 | WP_012732860.1 | DUF932 domain-containing protein | - |
| NIW68_RS30390 | 75051..75584 | - | 534 | WP_257820165.1 | hypothetical protein | - |
| NIW68_RS30395 | 75574..76230 | - | 657 | WP_257820168.1 | hypothetical protein | - |
| NIW68_RS30400 | 76296..76775 | - | 480 | WP_042967548.1 | hypothetical protein | - |
| NIW68_RS30405 | 77660..78136 | + | 477 | WP_042967545.1 | hypothetical protein | - |
| NIW68_RS30410 | 78403..79128 | - | 726 | WP_257820170.1 | hypothetical protein | - |
| NIW68_RS30415 | 79311..79913 | - | 603 | WP_257820173.1 | DUF3560 domain-containing protein | - |
| NIW68_RS30420 | 80375..81073 | + | 699 | WP_045678704.1 | hypothetical protein | - |
| NIW68_RS30425 | 81073..81459 | + | 387 | WP_017922593.1 | hypothetical protein | - |
| NIW68_RS30430 | 81883..82494 | + | 612 | WP_026051557.1 | methyltransferase domain-containing protein | - |
| NIW68_RS30435 | 82616..83158 | + | 543 | WP_080742217.1 | GNAT family N-acetyltransferase | - |
| NIW68_RS30440 | 83518..84984 | + | 1467 | WP_198292469.1 | ISNCY family transposase ISKpn21 | Transposase |
| NIW68_RS30445 | 85258..85374 | - | 117 | Protein_80 | IS3 family transposase | - |
| NIW68_RS30450 | 85724..88231 | + | 2508 | WP_257820177.1 | type VI secretion system Vgr family protein | - |
| NIW68_RS30455 | 88284..91037 | + | 2754 | WP_257820065.1 | hypothetical protein | - |
| NIW68_RS30460 | 91044..91748 | + | 705 | WP_257820067.1 | hypothetical protein | - |
| NIW68_RS30465 | 91745..91867 | + | 123 | WP_017924639.1 | hypothetical protein | - |
| NIW68_RS30470 | 93092..93502 | - | 411 | WP_254220809.1 | hypothetical protein | - |
| NIW68_RS30475 | 94054..94719 | - | 666 | WP_012735319.1 | gamma-mobile-trio protein GmtX | - |
| NIW68_RS30480 | 94716..97322 | - | 2607 | WP_012735320.1 | VPA1269 family protein | - |
| NIW68_RS30485 | 97315..98730 | - | 1416 | WP_012735321.1 | gamma-mobile-trio recombinase GmtY | - |
| NIW68_RS30490 | 98815..100077 | - | 1263 | WP_193373184.1 | MFS transporter | - |
| NIW68_RS30495 | 100028..100792 | - | 765 | WP_012735323.1 | arsenical resistance protein ArsH | - |
| NIW68_RS30500 | 100806..101633 | - | 828 | WP_012735324.1 | arsenic resistance N-acetyltransferase ArsN2 | - |
| NIW68_RS30505 | 101643..102704 | - | 1062 | WP_012735325.1 | ACR3 family arsenite efflux transporter | - |
| NIW68_RS30510 | 102691..103212 | - | 522 | WP_012735326.1 | arsenate reductase ArsC | - |
| NIW68_RS30515 | 103370..103702 | - | 333 | WP_012735327.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| NIW68_RS30520 | 103978..104681 | + | 704 | Protein_95 | translesion DNA synthesis-associated protein ImuA | - |
| NIW68_RS30525 | 104599..106077 | + | 1479 | WP_257820070.1 | DNA polymerase Y family protein | - |
| NIW68_RS30530 | 106084..109230 | + | 3147 | WP_257820072.1 | error-prone DNA polymerase | - |
| NIW68_RS30535 | 109246..109533 | + | 288 | WP_161522090.1 | hypothetical protein | - |
| NIW68_RS30540 | 109605..109814 | - | 210 | WP_161522091.1 | hypothetical protein | - |
| NIW68_RS30545 | 109867..110013 | - | 147 | Protein_100 | transposase domain-containing protein | - |
| NIW68_RS30550 | 110049..111285 | - | 1237 | Protein_101 | IS3 family transposase IS1416 | Transposase |
| NIW68_RS30555 | 111335..111541 | - | 207 | Protein_102 | transposase | - |
| NIW68_RS30560 | 111580..112892 | - | 1313 | Protein_103 | IS66 family transposase ISAeh1 | Transposase |
| NIW68_RS30565 | 113037..113513 | - | 477 | WP_012734051.1 | IS66 family transposase ISRtr5 | Transposase |
| NIW68_RS30570 | 113883..115223 | - | 1341 | WP_257820074.1 | KAP family NTPase | - |
| NIW68_RS30575 | 115319..118318 | - | 3000 | WP_257820077.1 | KAP family NTPase | - |
| NIW68_RS30580 | 118560..118790 | - | 231 | WP_257820078.1 | hypothetical protein | - |
| NIW68_RS30585 | 118849..119058 | - | 210 | WP_257820080.1 | hypothetical protein | - |
| NIW68_RS30590 | 119099..119473 | - | 375 | WP_257820082.1 | IS91 family transposase ISSde12 | Transposase |
| NIW68_RS30595 | 119668..120054 | - | 387 | WP_257820084.1 | hypothetical protein | - |
| NIW68_RS30600 | 120111..120494 | - | 384 | WP_257820086.1 | hypothetical protein | - |
| NIW68_RS30605 | 120527..120919 | - | 393 | WP_257820088.1 | hypothetical protein | - |
| NIW68_RS30610 | 121077..121385 | - | 309 | WP_257820090.1 | hypothetical protein | - |
| NIW68_RS30615 | 121713..122000 | - | 288 | WP_257820092.1 | hypothetical protein | - |
| NIW68_RS30620 | 122013..122189 | - | 177 | WP_257820094.1 | hypothetical protein | - |
| NIW68_RS30625 | 122202..122552 | - | 351 | WP_257820096.1 | type II toxin-antitoxin system ChpB family toxin | Toxin Detail |
| NIW68_RS30630 | 122546..122797 | - | 252 | WP_257820098.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| NIW68_RS30635 | 122945..125266 | - | 2322 | WP_257820100.1 | IS91 family transposase ISAzo26 | Transposase |
| NIW68_RS30640 | 125268..126089 | - | 822 | WP_257820102.1 | hypothetical protein | - |
| NIW68_RS30645 | 126086..126415 | - | 330 | WP_257820104.1 | hypothetical protein | - |
| NIW68_RS30650 | 126497..127294 | - | 798 | WP_012732720.1 | IS21 family transposase ISPa65 | Transposase |
| NIW68_RS30655 | 127287..127976 | - | 690 | Protein_122 | IS21 family transposase ISLisp1 | Transposase |
| NIW68_RS30660 | 128090..129109 | + | 1020 | WP_012732738.1 | IS110 family transposase IS884 | Transposase |
| NIW68_RS30665 | 129399..129536 | - | 138 | WP_017924734.1 | hypothetical protein | - |
| NIW68_RS30670 | 129585..131135 | + | 1551 | WP_153477359.1 | IS21 family transposase ISBmu3 | Transposase |
| NIW68_RS30675 | 131151..131900 | + | 750 | WP_006400877.1 | IS21 family transposase ISBmu3 | Transposase |
| NIW68_RS30680 | 132130..133716 | - | 1587 | WP_173941343.1 | IS66 family transposase ISBmu30 | Transposase |
| NIW68_RS30685 | 133816..134169 | - | 354 | WP_012732734.1 | IS66 family transposase ISBmu30 | Transposase |
| NIW68_RS30690 | 134169..134624 | - | 456 | WP_012732735.1 | IS66 family transposase ISRtr5 | Transposase |
| NIW68_RS30695 | 134711..134884 | - | 174 | Protein_130 | IS21 family transposase | - |
| NIW68_RS30700 | 134909..136465 | - | 1557 | WP_012732752.1 | IS66 family transposase ISAeh1 | Transposase |
| NIW68_RS30705 | 136497..136847 | - | 351 | WP_012732753.1 | IS66 family transposase ISBmu30 | Transposase |
| NIW68_RS30710 | 136823..137299 | - | 477 | WP_012734051.1 | IS66 family transposase ISRtr5 | Transposase |
| NIW68_RS30715 | 137388..138077 | - | 690 | Protein_134 | IS21 family transposase ISAlisp1 | Transposase |
| NIW68_RS30720 | 138215..138652 | - | 438 | WP_257820106.1 | IS66 family transposase ISRm2 | Transposase |
| NIW68_RS30725 | 138695..138886 | - | 192 | WP_257820107.1 | hypothetical protein | - |
| NIW68_RS30730 | 138955..139275 | - | 321 | WP_257820109.1 | hypothetical protein | - |
| NIW68_RS30735 | 139405..139683 | - | 279 | WP_257820111.1 | hypothetical protein | - |
| NIW68_RS30740 | 139709..139978 | - | 270 | WP_257820113.1 | hypothetical protein | - |
| NIW68_RS30745 | 140032..140268 | - | 237 | WP_257820115.1 | hypothetical protein | - |
| NIW68_RS30750 | 140818..142848 | - | 2031 | WP_257820117.1 | hypothetical protein | - |
| NIW68_RS30755 | 142848..143756 | - | 909 | WP_257820119.1 | hypothetical protein | - |
| NIW68_RS30760 | 143753..144763 | - | 1011 | WP_257820121.1 | GTPase domain-containing protein | - |
| NIW68_RS30765 | 144766..145863 | - | 1098 | WP_257820123.1 | GTPase-associated system all-helical protein GASH | - |
| NIW68_RS30770 | 145860..147209 | - | 1350 | WP_257820125.1 | metallophosphoesterase | - |
| NIW68_RS30775 | 147412..148173 | - | 762 | WP_257820127.1 | hypothetical protein | - |
| NIW68_RS30780 | 148210..148845 | - | 636 | WP_257820129.1 | GIY-YIG nuclease family protein | - |
| NIW68_RS30785 | 149105..149323 | - | 219 | WP_257820131.1 | hypothetical protein | - |
| NIW68_RS30790 | 149372..149659 | + | 288 | WP_257820133.1 | hypothetical protein | - |
| NIW68_RS30795 | 150206..151300 | - | 1095 | WP_012735332.1 | BsuBI/PstI family type II restriction endonuclease | - |
| NIW68_RS30800 | 151303..153096 | - | 1794 | WP_012735333.1 | Eco57I restriction-modification methylase domain-containing protein | - |
| NIW68_RS30805 | 153100..153336 | - | 237 | WP_012735334.1 | helix-turn-helix transcriptional regulator | - |
| NIW68_RS30810 | 153519..153695 | + | 177 | WP_257820135.1 | IS1595 family transposase ISBos1 | Transposase |
| NIW68_RS30815 | 153806..154003 | - | 198 | WP_257820136.1 | hypothetical protein | - |
| NIW68_RS30820 | 154119..155960 | - | 1842 | WP_257820138.1 | site-specific integrase | - |
| NIW68_RS30825 | 155957..156337 | - | 381 | WP_176359110.1 | hypothetical protein | - |
| NIW68_RS30830 | 156372..156689 | - | 318 | WP_257820140.1 | hypothetical protein | - |
| NIW68_RS30835 | 156752..157162 | - | 411 | WP_257820142.1 | type II toxin-antitoxin system VapC family toxin | - |
| NIW68_RS30840 | 157153..157407 | - | 255 | WP_012734091.1 | antitoxin | - |
| NIW68_RS30845 | 157588..157788 | - | 201 | WP_257806653.1 | hypothetical protein | - |
| NIW68_RS30850 | 157860..158270 | - | 411 | WP_257806654.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| NIW68_RS30855 | 158267..158509 | - | 243 | WP_257806656.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| NIW68_RS30860 | 158928..159263 | + | 336 | WP_252836630.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| NIW68_RS30865 | 159260..159738 | + | 479 | Protein_164 | ArsI/CadI family heavy metal resistance metalloenzyme | - |
| NIW68_RS30870 | 159748..160242 | + | 495 | WP_252836631.1 | arsenate reductase ArsC | - |
| NIW68_RS30875 | 160259..160753 | + | 495 | WP_252836632.1 | arsenate reductase ArsC | - |
| NIW68_RS30880 | 160818..161891 | + | 1074 | WP_252836633.1 | ACR3 family arsenite efflux transporter | - |
| NIW68_RS30885 | 161893..163131 | + | 1239 | WP_252836634.1 | MFS transporter | - |
| NIW68_RS30890 | 163128..163550 | + | 423 | WP_252836635.1 | arsenate reductase (glutaredoxin) | - |
| NIW68_RS30895 | 163528..164265 | + | 738 | WP_252836636.1 | arsenical resistance protein ArsH | - |
| NIW68_RS30900 | 164288..164716 | + | 429 | WP_257806659.1 | arsenic resistance N-acetyltransferase ArsN2 | - |
| NIW68_RS30905 | 164913..166823 | - | 1911 | WP_252836638.1 | hypothetical protein | - |
| NIW68_RS30910 | 166816..167790 | - | 975 | WP_257806661.1 | ATP-binding protein | - |
| NIW68_RS30915 | 167850..169856 | - | 2007 | WP_257806664.1 | hypothetical protein | - |
| NIW68_RS30920 | 171147..171332 | - | 186 | WP_257804602.1 | hypothetical protein | - |
| NIW68_RS30925 | 172036..172302 | + | 267 | WP_257804604.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|