MGE detailed information
MGE type: Conjugative plasmid MGE length: 89096 bp
Accession: NZ_CP099911 Location: 1..89096 Organism: Escherichia albertii strain 110_1_TBG_A Replicon: plasmid plas1
Accession: NZ_CP099911 Location: 1..89096 Organism: Escherichia albertii strain 110_1_TBG_A Replicon: plasmid plas1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NIY87_RS23615 (31) | 31..211 | - | 181 | Protein_0 | IS3 family transposase | - |
| NIY87_RS23620 (310) | 310..1959 | - | 1650 | Protein_1 | hypothetical protein | VF |
| NIY87_RS23625 (1943) | 1943..2141 | - | 199 | Protein_2 | hypothetical protein | - |
| NIY87_RS23630 (2187) | 2187..3393 | - | 1207 | Protein_3 | IS3 family transposase ISEc48 | Transposase |
| NIY87_RS23635 (3557) | 3557..4786 | + | 1230 | Protein_4 | IS3 family transposase IS2 | Transposase |
| NIY87_RS23640 (4711) | 4711..11928 | - | 7218 | WP_256877817.1 | TcdA/TcdB catalytic glycosyltransferase domain-containing protein | - |
| NIY87_RS23645 (11975) | 11975..12388 | - | 414 | WP_256877814.1 | hypothetical protein | - |
| NIY87_RS23650 (12660) | 12660..12825 | - | 166 | Protein_7 | IS3 family transposase | - |
| NIY87_RS23655 (13053) | 13053..14152 | + | 1100 | WP_256877818.1 | IS3 family transposase IS911 | Transposase |
| NIY87_RS23660 (14241) | 14241..15448 | + | 1208 | WP_256877819.1 | IS3 family transposase ISEc48 | Transposase |
| NIY87_RS23665 (15730) | 15730..16126 | + | 397 | Protein_10 | IS481 family transposase | - |
| NIY87_RS23670 (16637) | 16637..17272 | + | 636 | WP_074458670.1 | hypothetical protein | VF |
| NIY87_RS23675 (17438) | 17438..18353 | + | 916 | Protein_12 | IS630 family transposase ISSpu2 | Transposase |
| NIY87_RS23680 (18345) | 18345..18579 | + | 235 | Protein_13 | IS110 family transposase | - |
| NIY87_RS23685 (19384) | 19384..20241 | - | 858 | WP_000130642.1 | incFII family plasmid replication initiator RepA | - |
| NIY87_RS23690 (20260) | 20260..20440 | - | 181 | Protein_15 | protein CopA/IncA | - |
| NIY87_RS23695 (20544) | 20544..20801 | - | 258 | WP_000083826.1 | replication regulatory protein RepA | - |
| NIY87_RS23700 (21041) | 21041..21631 | - | 591 | WP_000766805.1 | DUF2726 domain-containing protein | - |
| NIY87_RS23705 (21669) | 21669..21878 | - | 210 | WP_001298565.1 | hemolysin expression modulator Hha | - |
| NIY87_RS23710 (21924) | 21924..22385 | - | 462 | WP_001233838.1 | thermonuclease family protein | - |
| NIY87_RS23715 (22630) | 22630..22842 | - | 213 | WP_256877815.1 | ANR family transcriptional regulator | - |
| NIY87_RS23720 (22971) | 22971..23531 | - | 561 | WP_000139318.1 | fertility inhibition protein FinO | - |
| NIY87_RS23725 (23634) | 23634..24494 | - | 861 | WP_000704523.1 | putative protein YcjY | VF |
| NIY87_RS23730 (24553) | 24553..25299 | - | 747 | WP_011251385.1 | conjugal transfer pilus acetylase TraX | - |
| NIY87_RS23735 (25319) | 25319..30589 | - | 5271 | WP_256876176.1 | Multifunctional conjugation protein TraI | Relaxase |
| NIY87_RS23740 (30589) | 30589..32823 | - | 2235 | WP_256877816.1 | type IV conjugative transfer system coupling protein TraD | - |
| NIY87_RS23745 (33076) | 33076..33786 | - | 711 | WP_045227890.1 | conjugal transfer complement resistance protein TraT | - |
| NIY87_RS23750 (33839) | 33839..34342 | - | 504 | WP_000605510.1 | hypothetical protein | - |
| NIY87_RS23755 (34357) | 34357..37179 | - | 2823 | WP_011251382.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| NIY87_RS23760 (37176) | 37176..38549 | - | 1374 | Protein_29 | conjugal transfer protein TraH | - |
| NIY87_RS23765 (38549) | 38549..38911 | - | 363 | WP_001443292.1 | P-type conjugative transfer protein TrbJ | - |
| NIY87_RS23770 (38841) | 38841..39386 | - | 546 | WP_000059847.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| NIY87_RS23775 (39373) | 39373..39657 | - | 285 | WP_000624109.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| NIY87_RS23780 (39776) | 39776..40123 | - | 348 | WP_001287895.1 | conjugal transfer protein TrbA | - |
| NIY87_RS23785 (40139) | 40139..40882 | - | 744 | WP_001030376.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| NIY87_RS23790 (40875) | 40875..41132 | - | 258 | WP_000864325.1 | conjugal transfer protein TrbE | - |
| NIY87_RS23795 (41159) | 41159..42967 | - | 1809 | WP_000821818.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| NIY87_RS23800 (42964) | 42964..43602 | - | 639 | WP_001104248.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| NIY87_RS23805 (43630) | 43630..44082 | - | 453 | WP_000069427.1 | hypothetical protein | - |
| NIY87_RS23810 (44112) | 44112..44573 | - | 462 | WP_000277845.1 | hypothetical protein | - |
| NIY87_RS23815 (44599) | 44599..45591 | - | 993 | WP_000830839.1 | conjugal transfer pilus assembly protein TraU | - |
| NIY87_RS23820 (45588) | 45588..46220 | - | 633 | WP_001203745.1 | type-F conjugative transfer system protein TraW | - |
| NIY87_RS23825 (46217) | 46217..46603 | - | 387 | WP_000214096.1 | type-F conjugative transfer system protein TrbI | - |
| NIY87_RS23830 (46600) | 46600..49227 | - | 2628 | WP_001064248.1 | type IV secretion system protein TraC | - |
| NIY87_RS23835 (49387) | 49387..49608 | - | 222 | WP_001278689.1 | conjugal transfer protein TraR | - |
| NIY87_RS23840 (49742) | 49742..50257 | - | 516 | WP_000809906.1 | type IV conjugative transfer system lipoprotein TraV | - |
| NIY87_RS23845 (50254) | 50254..50505 | - | 252 | WP_001038341.1 | conjugal transfer protein TrbG | - |
| NIY87_RS23850 (50502) | 50502..50819 | - | 318 | WP_001057292.1 | conjugal transfer protein TrbD | - |
| NIY87_RS23855 (50816) | 50816..51388 | - | 573 | WP_000002794.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| NIY87_RS23860 (51378) | 51378..52805 | - | 1428 | WP_000146685.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| NIY87_RS23865 (52805) | 52805..53533 | - | 729 | WP_001230787.1 | type-F conjugative transfer system secretin TraK | - |
| NIY87_RS23870 (53520) | 53520..54086 | - | 567 | WP_000399792.1 | type IV conjugative transfer system protein TraE | - |
| NIY87_RS23875 (54108) | 54108..54419 | - | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| NIY87_RS23880 (54434) | 54434..54793 | - | 360 | WP_000340272.1 | type IV conjugative transfer system pilin TraA | - |
| NIY87_RS23885 (54827) | 54827..55054 | - | 228 | WP_001254385.1 | conjugal transfer relaxosome protein TraY | - |
| NIY87_RS23890 (55148) | 55148..55834 | - | 687 | WP_000332493.1 | PAS domain-containing protein | - |
| NIY87_RS23895 (56025) | 56025..56408 | - | 384 | WP_000124979.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| NIY87_RS23900 (56685) | 56685..57332 | + | 648 | WP_256876177.1 | hypothetical protein | VF |
| NIY87_RS23905 (57629) | 57629..58450 | - | 822 | WP_001234469.1 | DUF932 domain-containing protein | - |
| NIY87_RS23910 (58570) | 58570..58857 | - | 288 | WP_000107535.1 | hypothetical protein | - |
| NIY87_RS23915 (58882) | 58882..59088 | - | 207 | WP_000547971.1 | hypothetical protein | - |
| NIY87_RS23920 (59158) | 59158..59331 | + | 174 | Protein_61 | hypothetical protein | - |
| NIY87_RS23925 (59329) | 59329..59559 | - | 231 | WP_256876178.1 | hypothetical protein | - |
| NIY87_RS23930 (59779) | 59779..59904 | - | 126 | WP_001372321.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| NIY87_RS23935 (59846) | 59846..59995 | - | 150 | Protein_64 | plasmid maintenance protein Mok | - |
| - (59981) | 59981..60205 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - (59981) | 59981..60205 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - (59981) | 59981..60205 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - (59981) | 59981..60205 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| NIY87_RS23940 (60017) | 60017..60205 | + | 189 | WP_001299721.1 | hypothetical protein | - |
| NIY87_RS23945 (60174) | 60174..60936 | - | 763 | Protein_66 | plasmid SOS inhibition protein A | - |
| NIY87_RS23950 (60933) | 60933..61367 | - | 435 | WP_000845873.1 | conjugation system SOS inhibitor PsiB | - |
| NIY87_RS23955 (61422) | 61422..63380 | - | 1959 | WP_000117210.1 | ParB/RepB/Spo0J family partition protein | - |
| NIY87_RS23960 (63445) | 63445..63678 | - | 234 | WP_000006030.1 | DUF905 family protein | - |
| NIY87_RS23965 (63740) | 63740..64279 | - | 540 | WP_000290812.1 | single-stranded DNA-binding protein | - |
| NIY87_RS23970 (64305) | 64305..64511 | - | 207 | WP_000547971.1 | hypothetical protein | - |
| NIY87_RS23975 (64752) | 64752..64979 | - | 228 | WP_071594011.1 | hypothetical protein | - |
| NIY87_RS23980 (65131) | 65131..65694 | - | 564 | WP_001330829.1 | class I SAM-dependent methyltransferase | - |
| NIY87_RS23985 (65742) | 65742..67103 | - | 1362 | WP_001554356.1 | DUF3560 domain-containing protein | - |
| NIY87_RS23990 (67155) | 67155..67385 | - | 231 | WP_000218642.1 | hypothetical protein | - |
| NIY87_RS23995 (68423) | 68423..68614 | - | 192 | WP_001027519.1 | hypothetical protein | - |
| NIY87_RS24000 (68611) | 68611..69033 | - | 423 | WP_000271753.1 | DUF1380 family protein | - |
| NIY87_RS24005 (69080) | 69080..69505 | - | 426 | WP_001198941.1 | antirestriction protein | - |
| NIY87_RS24010 (69918) | 69918..70688 | - | 771 | WP_001006200.1 | hypothetical protein | - |
| NIY87_RS24015 (70733) | 70733..71251 | - | 519 | WP_223174655.1 | DUF1380 family protein | - |
| NIY87_RS24020 (71181) | 71181..71402 | - | 222 | WP_001104873.1 | hypothetical protein | - |
| NIY87_RS24025 (71403) | 71403..72086 | - | 684 | WP_000085940.1 | DNA methylase | - |
| NIY87_RS24030 (72163) | 72163..72455 | - | 293 | Protein_83 | hypothetical protein | - |
| NIY87_RS24035 (72602) | 72602..73564 | + | 963 | WP_000959884.1 | plasmid segregation protein ParM | - |
| NIY87_RS24040 (73567) | 73567..73917 | + | 351 | WP_000361384.1 | plasmid partitioning/stability family protein | - |
| NIY87_RS24045 (74068) | 74068..74580 | - | 513 | WP_001027529.1 | hypothetical protein | - |
| NIY87_RS24050 (75021) | 75021..76556 | + | 1536 | WP_256876209.1 | pore-forming bacteriocin colicin B | - |
| NIY87_RS24055 (76574) | 76574..77101 | - | 528 | WP_000203268.1 | colicin B immunity protein | - |
| NIY87_RS24060 (77344) | 77344..78159 | + | 816 | WP_000449473.1 | lipid II-degrading bacteriocin colicin M | - |
| NIY87_RS24065 (78209) | 78209..78562 | - | 354 | WP_000864812.1 | colicin M immunity protein | - |
| NIY87_RS24070 (78735) | 78735..79517 | - | 783 | WP_021533580.1 | site-specific integrase | - |
| NIY87_RS24075 (79519) | 79519..79932 | - | 414 | WP_000465043.1 | hypothetical protein | - |
| NIY87_RS24080 (80501) | 80501..80731 | + | 231 | WP_256876210.1 | type II toxin-antitoxin system VapB family antitoxin | - |
| NIY87_RS24085 (80728) | 80728..81144 | + | 417 | WP_256876211.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| NIY87_RS24090 (81284) | 81284..82264 | + | 981 | WP_256876212.1 | hypothetical protein | - |
| NIY87_RS24095 (82472) | 82472..84043 | - | 1572 | WP_256876213.1 | ATP-binding protein | - |
| NIY87_RS24100 (84362) | 84362..84631 | + | 270 | WP_256876214.1 | hypothetical protein | - |
| NIY87_RS24105 (84619) | 84619..85215 | + | 597 | WP_256876215.1 | hypothetical protein | - |
| NIY87_RS24110 (85752) | 85752..86093 | + | 342 | Protein_99 | protein RepA | - |
| NIY87_RS24115 (86194) | 86194..87366 | + | 1173 | WP_256876216.1 | IS21 family transposase IS21 | Transposase |
| NIY87_RS24120 (87366) | 87366..88163 | + | 798 | WP_146707378.1 | IS21 family transposase IS21 | Transposase |
| NIY87_RS24125 (88221) | 88221..88574 | - | 354 | Protein_102 | tyrosine-type recombinase/integrase | - |
| NIY87_RS24130 (88695) | 88695..88796 | - | 102 | Protein_103 | hypothetical protein | - |
| NIY87_RS24135 (88862) | 88862..89069 | + | 208 | Protein_104 | IS110 family transposase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|