MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 79674 bp
Accession: NZ_CP099902 Location: 1..79674 Organism: Escherichia albertii strain 147_1_TBG_A Replicon: plasmid plas4
Accession: NZ_CP099902 Location: 1..79674 Organism: Escherichia albertii strain 147_1_TBG_A Replicon: plasmid plas4
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NIZ13_RS24270 (NIZ13_24255) | 94..516 | + | 423 | WP_256875902.1 | hypothetical protein | - |
| NIZ13_RS24275 (NIZ13_24260) | 746..1543 | + | 798 | WP_256875901.1 | hypothetical protein | VF |
| NIZ13_RS24280 (NIZ13_24265) | 1582..2043 | + | 462 | Protein_2 | hypothetical protein | VF |
| NIZ13_RS24285 (NIZ13_24270) | 2066..3292 | - | 1227 | Protein_3 | IS3 family transposase | - |
| NIZ13_RS24290 | 3607..3786 | - | 180 | WP_256875900.1 | LuxR C-terminal-related transcriptional regulator | - |
| NIZ13_RS24295 (NIZ13_24280) | 5368..6191 | + | 824 | Protein_5 | polysaccharide deacetylase family protein | - |
| NIZ13_RS24300 (NIZ13_24285) | 6191..7298 | + | 1108 | Protein_6 | glycosyltransferase family 4 protein | - |
| NIZ13_RS24305 (NIZ13_24290) | 7386..8387 | + | 1002 | Protein_7 | Lipid A biosynthesis myristoyltransferase | VF |
| NIZ13_RS24310 (NIZ13_24295) | 9018..9965 | + | 948 | WP_256875899.1 | VirK/YbjX family protein | - |
| NIZ13_RS24315 (NIZ13_24300) | 10201..10346 | + | 146 | Protein_9 | IS256 family transposase ISSod4 | Transposase |
| NIZ13_RS24320 (NIZ13_24305) | 10389..10909 | - | 521 | Protein_10 | ESPR-type extended signal peptide-containing protein | - |
| NIZ13_RS24325 (NIZ13_24310) | 11233..11718 | + | 486 | WP_256879714.1 | heme-binding protein | - |
| NIZ13_RS24330 (NIZ13_24315) | 12465..12844 | - | 380 | Protein_12 | transposase | - |
| NIZ13_RS24335 (NIZ13_24320) | 12914..15912 | - | 2999 | Protein_13 | Tn3 family transposase | - |
| NIZ13_RS24340 (NIZ13_24325) | 16083..16644 | + | 562 | Protein_14 | Tn3 family transposase TnBth3 | Transposase |
| NIZ13_RS24345 (NIZ13_24330) | 16743..17933 | + | 1191 | Protein_15 | lipoprotein-releasing ABC transporter permease subunit LolC | - |
| NIZ13_RS24350 (NIZ13_24335) | 18144..19736 | - | 1593 | WP_256878671.1 | IS66 family transposase ISEc47 | Transposase |
| NIZ13_RS24355 (NIZ13_24340) | 19767..20117 | - | 351 | WP_000624718.1 | IS66 family transposase ISEc47 | Transposase |
| NIZ13_RS24360 (NIZ13_24345) | 20114..20533 | - | 420 | WP_065106474.1 | IS66 family transposase ISEc23 | Transposase |
| NIZ13_RS24365 (NIZ13_24350) | 20620..20805 | + | 186 | Protein_19 | IS256 family transposase IS1414 | Transposase |
| NIZ13_RS24370 (NIZ13_24355) | 20801..21070 | - | 270 | Protein_20 | site-specific integrase | - |
| NIZ13_RS24375 (NIZ13_24360) | 21130..21726 | - | 597 | WP_059217960.1 | hypothetical protein | - |
| NIZ13_RS24380 (NIZ13_24365) | 21714..21983 | - | 270 | WP_000343793.1 | hypothetical protein | - |
| NIZ13_RS24385 (NIZ13_24370) | 22580..22798 | + | 219 | WP_000813639.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| NIZ13_RS24390 (NIZ13_24375) | 22800..23105 | + | 306 | WP_001159871.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| NIZ13_RS24395 (NIZ13_24380) | 23106..23914 | + | 809 | Protein_25 | site-specific integrase | - |
| NIZ13_RS24400 (NIZ13_24385) | 24094..24738 | + | 645 | WP_001144036.1 | ParA family protein | - |
| NIZ13_RS24405 (NIZ13_24390) | 24825..25133 | + | 309 | WP_000030204.1 | molecular chaperone GroEL | - |
| NIZ13_RS24410 (NIZ13_24395) | 25545..26525 | + | 981 | WP_256875926.1 | plasmid segregation protein ParM | - |
| NIZ13_RS24415 (NIZ13_24400) | 26518..26934 | + | 417 | WP_256875925.1 | plasmid partitioning/stability family protein | - |
| NIZ13_RS24420 (NIZ13_24405) | 26936..27358 | - | 423 | Protein_30 | DUF4113 domain-containing protein | - |
| NIZ13_RS24425 (NIZ13_24410) | 27473..27724 | + | 252 | WP_001139207.1 | plasmid stabilization protein | Antitoxin Detail |
| NIZ13_RS24430 (NIZ13_24415) | 27721..28008 | + | 288 | WP_000222775.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| NIZ13_RS24435 (NIZ13_24420) | 28018..28389 | + | 372 | WP_256875924.1 | hypothetical protein | - |
| NIZ13_RS24440 (NIZ13_24425) | 29290..29876 | + | 587 | Protein_34 | serine acetyltransferase | - |
| NIZ13_RS24445 (NIZ13_24430) | 30156..30749 | - | 594 | WP_001523457.1 | ProQ/FINO family protein | - |
| NIZ13_RS24450 (NIZ13_24435) | 31752..32516 | + | 765 | WP_256875923.1 | helix-turn-helix domain-containing protein | - |
| NIZ13_RS24455 (NIZ13_24440) | 32670..33455 | - | 786 | Protein_37 | porin OmpC | - |
| NIZ13_RS24460 (NIZ13_24445) | 33466..33594 | + | 129 | Protein_38 | hypothetical protein | - |
| NIZ13_RS24465 (NIZ13_24450) | 33767..34120 | + | 354 | WP_256875922.1 | colicin M immunity protein | - |
| NIZ13_RS24470 (NIZ13_24455) | 34170..34985 | - | 816 | WP_000449473.1 | lipid II-degrading bacteriocin colicin M | - |
| NIZ13_RS24475 (NIZ13_24460) | 35229..35756 | + | 528 | WP_033800732.1 | colicin B immunity protein | - |
| NIZ13_RS24480 (NIZ13_24465) | 35774..37309 | - | 1536 | WP_256875921.1 | pore-forming bacteriocin colicin B | - |
| NIZ13_RS24485 (NIZ13_24470) | 37747..38082 | + | 336 | WP_256875920.1 | hypothetical protein | - |
| NIZ13_RS24490 (NIZ13_24475) | 38332..38727 | + | 396 | WP_256875919.1 | hypothetical protein | - |
| NIZ13_RS24495 (NIZ13_24480) | 38876..39181 | + | 306 | WP_256875918.1 | hypothetical protein | - |
| NIZ13_RS24500 (NIZ13_24485) | 39466..39669 | + | 204 | Protein_46 | hypothetical protein | - |
| NIZ13_RS24505 (NIZ13_24490) | 40024..40899 | + | 876 | Protein_47 | IS481 family transposase ISErsp1 | Transposase |
| NIZ13_RS24510 (NIZ13_24495) | 40929..42524 | - | 1596 | WP_256879711.1 | IS66 family transposase ISEc47 | Transposase |
| NIZ13_RS24515 (NIZ13_24500) | 42555..42905 | - | 351 | WP_000624718.1 | IS66 family transposase ISEc47 | Transposase |
| NIZ13_RS24520 (NIZ13_24505) | 42902..43321 | - | 420 | WP_065106474.1 | IS66 family transposase ISEc23 | Transposase |
| NIZ13_RS24525 (NIZ13_24510) | 43405..44265 | - | 861 | Protein_51 | translesion error-prone DNA polymerase V subunit UmuC | - |
| NIZ13_RS24530 (NIZ13_24515) | 44265..44702 | - | 438 | Protein_52 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| NIZ13_RS24535 (NIZ13_24520) | 44699..44941 | - | 243 | WP_256875913.1 | DinI-like family protein | - |
| NIZ13_RS24540 (NIZ13_24525) | 44944..45276 | + | 333 | WP_256875912.1 | CPBP family intramembrane metalloprotease | - |
| NIZ13_RS24545 (NIZ13_24530) | 45369..45626 | + | 258 | WP_000557618.1 | type II toxin-antitoxin system antitoxin PemI | - |
| NIZ13_RS24550 (NIZ13_24535) | 45559..45960 | + | 402 | WP_256875911.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| NIZ13_RS24555 (NIZ13_24540) | 46115..47224 | - | 1110 | WP_256875910.1 | DUF4238 domain-containing protein | - |
| NIZ13_RS24560 (NIZ13_24545) | 47657..47860 | + | 204 | Protein_58 | hypothetical protein | - |
| NIZ13_RS24565 (NIZ13_24550) | 48140..48535 | - | 396 | WP_000445934.1 | plasmid partitioning/stability family protein | - |
| NIZ13_RS24570 (NIZ13_24555) | 48535..49494 | - | 960 | WP_229467669.1 | plasmid segregation protein ParM | - |
| NIZ13_RS24575 (NIZ13_24560) | 49746..50036 | + | 291 | Protein_61 | hypothetical protein | - |
| NIZ13_RS24580 (NIZ13_24565) | 50113..50181 | + | 69 | Protein_62 | adenine-specific DNA-methyltransferase | - |
| NIZ13_RS24585 (NIZ13_24570) | 50266..51966 | - | 1701 | WP_096961645.1 | group II intron reverse transcriptase/maturase | - |
| NIZ13_RS24590 (NIZ13_24575) | 52588..53199 | + | 612 | Protein_64 | DNA methylase | - |
| NIZ13_RS24595 (NIZ13_24580) | 53200..53421 | + | 222 | WP_001104879.1 | hypothetical protein | - |
| NIZ13_RS24600 (NIZ13_24585) | 53402..53869 | + | 468 | WP_256875909.1 | DUF1380 family protein | - |
| NIZ13_RS24605 (NIZ13_24590) | 53920..54696 | + | 777 | WP_256875908.1 | hypothetical protein | - |
| NIZ13_RS24610 (NIZ13_24595) | 54801..55991 | + | 1191 | Protein_68 | IS4 family transposase ISEc60 | Transposase |
| NIZ13_RS24615 (NIZ13_24600) | 56279..56536 | + | 258 | WP_000083843.1 | replication regulatory protein RepA | - |
| NIZ13_RS24620 (NIZ13_24605) | 56769..56843 | + | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| NIZ13_RS24625 (NIZ13_24610) | 56836..57693 | + | 858 | WP_256875907.1 | incFII family plasmid replication initiator RepA | - |
| NIZ13_RS24630 (NIZ13_24615) | 58396..58554 | + | 159 | WP_204629491.1 | hypothetical protein | - |
| NIZ13_RS24635 (NIZ13_24620) | 58609..58878 | + | 270 | WP_087905370.1 | type II toxin-antitoxin system antitoxin YacA | - |
| NIZ13_RS24640 (NIZ13_24625) | 58878..58985 | + | 108 | Protein_74 | type II toxin-antitoxin system toxin YacB | - |
| NIZ13_RS24650 (NIZ13_24635) | 61013..68782 | + | 7770 | WP_256879712.1 | hypothetical protein | VF |
| NIZ13_RS24655 (NIZ13_24640) | 68813..69196 | + | 384 | Protein_77 | IS3 family transposase | - |
| NIZ13_RS24660 (NIZ13_24645) | 69507..70541 | - | 1035 | Protein_78 | IS3 family transposase IS2 | Transposase |
| NIZ13_RS24665 (NIZ13_24650) | 70535..70672 | + | 138 | Protein_79 | AAA family ATPase | - |
| NIZ13_RS24670 (NIZ13_24655) | 70730..71103 | - | 374 | Protein_80 | DDE-type integrase/transposase/recombinase | - |
| NIZ13_RS24675 (NIZ13_24660) | 71176..72344 | + | 1169 | WP_256879713.1 | IS3 family transposase IS911 | Transposase |
| NIZ13_RS24680 (NIZ13_24665) | 72550..72946 | + | 397 | Protein_82 | IS481 family transposase | - |
| NIZ13_RS24685 (NIZ13_24670) | 73451..74086 | + | 636 | WP_204629485.1 | hypothetical protein | VF |
| NIZ13_RS24690 (NIZ13_24675) | 74223..75183 | + | 961 | Protein_84 | IS630 family transposase ISSpu2 | Transposase |
| NIZ13_RS24695 (NIZ13_24680) | 75376..77028 | + | 1653 | WP_256875903.1 | hypothetical protein | VF |
| NIZ13_RS24700 (NIZ13_24685) | 77141..77320 | + | 180 | Protein_86 | IS3 family transposase | - |
| NIZ13_RS24705 (NIZ13_24690) | 77326..77465 | - | 140 | Protein_87 | IS110 family transposase | - |
| NIZ13_RS24710 (NIZ13_24695) | 77545..77658 | + | 114 | Protein_88 | hypothetical protein | - |
| NIZ13_RS24715 (NIZ13_24700) | 77779..78519 | + | 741 | WP_001066941.1 | tyrosine-type recombinase/integrase | - |
| NIZ13_RS24720 (NIZ13_24705) | 78805..79422 | - | 618 | Protein_90 | RepB family plasmid replication initiator protein | - |
| NIZ13_RS24725 (NIZ13_24710) | 79420..79623 | + | 204 | Protein_91 | Tn3 family transposase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|