MGE detailed information
MGE type: Conjugative plasmid MGE length: 89091 bp
Accession: NZ_CP099882 Location: 1..89091 Organism: Escherichia albertii strain 233_2_GWG_B Replicon: plasmid plas2
Accession: NZ_CP099882 Location: 1..89091 Organism: Escherichia albertii strain 233_2_GWG_B Replicon: plasmid plas2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NIZ21_RS24120 () | 1..858 | + | 858 | WP_000130642.1 | incFII family plasmid replication initiator RepA | - |
| NIZ21_RS24125 () | 1663..1897 | - | 235 | Protein_1 | IS110 family transposase | - |
| NIZ21_RS24130 () | 1889..2804 | - | 916 | Protein_2 | IS630 family transposase ISSpu2 | Transposase |
| NIZ21_RS24135 () | 2970..3605 | - | 636 | WP_074458670.1 | hypothetical protein | VF |
| NIZ21_RS24140 () | 4116..4512 | - | 397 | Protein_4 | IS481 family transposase | - |
| NIZ21_RS24155 () | 7416..7581 | + | 166 | Protein_7 | IS3 family transposase | - |
| NIZ21_RS24160 () | 7853..15529 | + | 7677 | WP_256880933.1 | TcdA/TcdB catalytic glycosyltransferase domain-containing protein | - |
| NIZ21_RS24170 () | 16846..18053 | + | 1208 | WP_256877819.1 | IS3 family transposase ISEc48 | Transposase |
| NIZ21_RS24175 () | 18099..18297 | + | 199 | Protein_11 | hypothetical protein | - |
| NIZ21_RS24180 () | 18281..19930 | + | 1650 | WP_256876217.1 | hypothetical protein | VF |
| NIZ21_RS24185 () | 20031..20212 | + | 182 | Protein_13 | IS3 family transposase | - |
| NIZ21_RS24190 () | 20218..20469 | - | 252 | Protein_14 | IS110 family transposase | - |
| NIZ21_RS24195 () | 20535..20636 | + | 102 | Protein_15 | hypothetical protein | - |
| NIZ21_RS24200 () | 20757..21110 | + | 354 | Protein_16 | tyrosine-type recombinase/integrase | - |
| NIZ21_RS24205 () | 21168..21965 | - | 798 | WP_146707378.1 | IS21 family transposase IS21 | Transposase |
| NIZ21_RS24210 () | 21965..23137 | - | 1173 | WP_256876216.1 | IS21 family transposase IS21 | Transposase |
| NIZ21_RS24215 () | 23238..23579 | - | 342 | Protein_19 | protein RepA | - |
| NIZ21_RS24220 () | 24116..24712 | - | 597 | WP_256876215.1 | hypothetical protein | - |
| NIZ21_RS24225 () | 24700..24969 | - | 270 | WP_256876214.1 | hypothetical protein | - |
| NIZ21_RS24230 () | 25288..26859 | + | 1572 | WP_256876213.1 | ATP-binding protein | - |
| NIZ21_RS24235 () | 27067..28047 | - | 981 | WP_256876212.1 | hypothetical protein | - |
| NIZ21_RS24240 () | 28187..28603 | - | 417 | WP_256876211.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| NIZ21_RS24245 () | 28600..28830 | - | 231 | WP_256876210.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| NIZ21_RS24250 () | 29399..29812 | + | 414 | WP_000465043.1 | hypothetical protein | - |
| NIZ21_RS24255 () | 29814..30596 | + | 783 | WP_021533580.1 | site-specific integrase | - |
| NIZ21_RS24260 () | 30769..31122 | + | 354 | WP_000864812.1 | colicin M immunity protein | - |
| NIZ21_RS24265 () | 31172..31987 | - | 816 | WP_000449473.1 | lipid II-degrading bacteriocin colicin M | - |
| NIZ21_RS24270 () | 32230..32757 | + | 528 | WP_000203268.1 | colicin B immunity protein | - |
| NIZ21_RS24275 () | 32775..34310 | - | 1536 | WP_256876209.1 | pore-forming bacteriocin colicin B | - |
| NIZ21_RS24280 () | 34751..35263 | + | 513 | WP_001027529.1 | hypothetical protein | - |
| NIZ21_RS24285 () | 35414..35764 | - | 351 | WP_000361384.1 | plasmid partitioning/stability family protein | - |
| NIZ21_RS24290 () | 35767..36729 | - | 963 | WP_000959884.1 | plasmid segregation protein ParM | - |
| NIZ21_RS24295 () | 36876..37168 | + | 293 | Protein_35 | hypothetical protein | - |
| NIZ21_RS24300 () | 37245..37928 | + | 684 | WP_000085940.1 | DNA methylase | - |
| NIZ21_RS24305 () | 37929..38150 | + | 222 | WP_001104873.1 | hypothetical protein | - |
| NIZ21_RS24310 () | 38080..38598 | + | 519 | WP_223174655.1 | DUF1380 family protein | - |
| NIZ21_RS24315 () | 38643..39413 | + | 771 | WP_001006200.1 | hypothetical protein | - |
| NIZ21_RS24320 () | 39826..40251 | + | 426 | WP_001198941.1 | antirestriction protein | - |
| NIZ21_RS24325 () | 40298..40720 | + | 423 | WP_000271753.1 | DUF1380 family protein | - |
| NIZ21_RS24330 () | 40717..40908 | + | 192 | WP_001027519.1 | hypothetical protein | - |
| NIZ21_RS24335 () | 41946..42176 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| NIZ21_RS24340 () | 42228..43589 | + | 1362 | WP_001554356.1 | DUF3560 domain-containing protein | - |
| NIZ21_RS24345 () | 43637..44200 | + | 564 | WP_001330829.1 | class I SAM-dependent methyltransferase | - |
| NIZ21_RS24350 () | 44352..44579 | + | 228 | WP_071594011.1 | hypothetical protein | - |
| NIZ21_RS24355 () | 44820..45026 | + | 207 | WP_000547971.1 | hypothetical protein | - |
| NIZ21_RS24360 () | 45052..45591 | + | 540 | WP_000290812.1 | single-stranded DNA-binding protein | - |
| NIZ21_RS24365 () | 45653..45886 | + | 234 | WP_000006030.1 | DUF905 family protein | - |
| NIZ21_RS24370 () | 45951..47909 | + | 1959 | WP_000117210.1 | ParB/RepB/Spo0J family partition protein | - |
| NIZ21_RS24375 () | 47964..48398 | + | 435 | WP_000845873.1 | conjugation system SOS inhibitor PsiB | - |
| NIZ21_RS24380 () | 48395..49157 | + | 763 | Protein_52 | plasmid SOS inhibition protein A | - |
| NIZ21_RS24385 () | 49126..49314 | - | 189 | WP_001299721.1 | hypothetical protein | - |
| - () | 49126..49350 | + | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 49126..49350 | + | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 49126..49350 | + | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 49126..49350 | + | 225 | NuclAT_0 | - | Antitoxin Detail |
| - | 49283..49348 | - | 66 | - | - | Antitoxin Detail |
| NIZ21_RS24390 () | 49336..49485 | + | 150 | Protein_54 | plasmid maintenance protein Mok | - |
| NIZ21_RS24395 () | 49427..49552 | + | 126 | WP_001372321.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| NIZ21_RS24400 () | 49772..50002 | + | 231 | WP_256876178.1 | hypothetical protein | - |
| NIZ21_RS24405 () | 50000..50173 | - | 174 | Protein_57 | hypothetical protein | - |
| NIZ21_RS24410 () | 50243..50449 | + | 207 | WP_000547971.1 | hypothetical protein | - |
| NIZ21_RS24415 () | 50474..50761 | + | 288 | WP_000107535.1 | hypothetical protein | - |
| NIZ21_RS24420 () | 50881..51702 | + | 822 | WP_001234469.1 | DUF932 domain-containing protein | - |
| NIZ21_RS24425 () | 51999..52646 | - | 648 | WP_256876177.1 | hypothetical protein | VF |
| NIZ21_RS24430 () | 52923..53306 | + | 384 | WP_000124979.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| NIZ21_RS24435 () | 53497..54183 | + | 687 | WP_000332493.1 | PAS domain-containing protein | - |
| NIZ21_RS24440 () | 54279..54506 | + | 228 | WP_001254385.1 | conjugal transfer relaxosome protein TraY | - |
| NIZ21_RS24445 () | 54540..54899 | + | 360 | WP_000340272.1 | type IV conjugative transfer system pilin TraA | - |
| NIZ21_RS24450 () | 54914..55225 | + | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| NIZ21_RS24455 () | 55247..55813 | + | 567 | WP_000399792.1 | type IV conjugative transfer system protein TraE | - |
| NIZ21_RS24460 () | 55800..56528 | + | 729 | WP_001230787.1 | type-F conjugative transfer system secretin TraK | - |
| NIZ21_RS24465 () | 56528..57955 | + | 1428 | WP_000146685.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| NIZ21_RS24470 () | 57945..58517 | + | 573 | WP_000002794.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| NIZ21_RS24475 () | 58514..58831 | + | 318 | WP_001057292.1 | conjugal transfer protein TrbD | - |
| NIZ21_RS24480 () | 58828..59079 | + | 252 | WP_001038341.1 | conjugal transfer protein TrbG | - |
| NIZ21_RS24485 () | 59076..59591 | + | 516 | WP_000809906.1 | type IV conjugative transfer system lipoprotein TraV | - |
| NIZ21_RS24490 () | 59725..59946 | + | 222 | WP_001278689.1 | conjugal transfer protein TraR | - |
| NIZ21_RS24495 () | 60106..62733 | + | 2628 | WP_001064248.1 | type IV secretion system protein TraC | - |
| NIZ21_RS24500 () | 62730..63116 | + | 387 | WP_000214096.1 | type-F conjugative transfer system protein TrbI | - |
| NIZ21_RS24505 () | 63113..63745 | + | 633 | WP_001203745.1 | type-F conjugative transfer system protein TraW | - |
| NIZ21_RS24510 () | 63742..64734 | + | 993 | WP_000830839.1 | conjugal transfer pilus assembly protein TraU | - |
| NIZ21_RS24515 () | 64760..65221 | + | 462 | WP_000277845.1 | hypothetical protein | - |
| NIZ21_RS24520 () | 65251..65703 | + | 453 | WP_000069427.1 | hypothetical protein | - |
| NIZ21_RS24525 () | 65731..66369 | + | 639 | WP_001104248.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| NIZ21_RS24530 () | 66366..68174 | + | 1809 | WP_000821818.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| NIZ21_RS24535 () | 68201..68458 | + | 258 | WP_000864325.1 | conjugal transfer protein TrbE | - |
| NIZ21_RS24540 () | 68451..69194 | + | 744 | WP_001030376.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| NIZ21_RS24545 () | 69210..69557 | + | 348 | WP_001287895.1 | conjugal transfer protein TrbA | - |
| NIZ21_RS24550 () | 69676..69960 | + | 285 | WP_000624109.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| NIZ21_RS24555 () | 69947..70492 | + | 546 | WP_000059847.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| NIZ21_RS24560 () | 70422..70784 | + | 363 | WP_001443292.1 | P-type conjugative transfer protein TrbJ | - |
| NIZ21_RS24565 () | 70784..72157 | + | 1374 | Protein_89 | conjugal transfer protein TraH | - |
| NIZ21_RS24570 () | 72154..74976 | + | 2823 | WP_011251382.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| NIZ21_RS24575 () | 74991..75494 | + | 504 | WP_000605510.1 | hypothetical protein | - |
| NIZ21_RS24580 () | 75547..76257 | + | 711 | WP_045227890.1 | conjugal transfer complement resistance protein TraT | - |
| NIZ21_RS24585 () | 76510..78744 | + | 2235 | WP_256877816.1 | type IV conjugative transfer system coupling protein TraD | - |
| NIZ21_RS24590 () | 78744..84014 | + | 5271 | WP_256876176.1 | Multifunctional conjugation protein TraI | Relaxase |
| NIZ21_RS24595 () | 84034..84780 | + | 747 | WP_011251385.1 | conjugal transfer pilus acetylase TraX | - |
| NIZ21_RS24600 () | 84839..85699 | + | 861 | WP_000704523.1 | putative protein YcjY | VF |
| NIZ21_RS24605 () | 85802..86362 | + | 561 | WP_000139318.1 | fertility inhibition protein FinO | - |
| NIZ21_RS24610 () | 86491..86703 | + | 213 | WP_001309245.1 | ANR family transcriptional regulator | - |
| NIZ21_RS24615 () | 86948..87409 | + | 462 | WP_001233838.1 | thermonuclease family protein | - |
| NIZ21_RS24620 () | 87455..87664 | + | 210 | WP_001298565.1 | hemolysin expression modulator Hha | - |
| NIZ21_RS24625 () | 87702..88292 | + | 591 | WP_000766805.1 | DUF2726 domain-containing protein | - |
| NIZ21_RS24630 () | 88532..88789 | + | 258 | WP_000083826.1 | replication regulatory protein RepA | - |
| NIZ21_RS24635 () | 88893..89079 | + | 187 | Protein_103 | protein CopA/IncA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|