MGE detailed information
MGE type: Prophage MGE length: 7721 bp
Accession: NZ_CP099815 Location: 460436..468156 Organism: Yersinia ruckeri strain NVI-11050 Replicon: chromosome
Accession: NZ_CP099815 Location: 460436..468156 Organism: Yersinia ruckeri strain NVI-11050 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LNQ40_RS02065 (LNQ40_002065) | 455705..459007 | - | 3303 | WP_038241716.1 | STY4851/ECs_5259 family protein | - |
| LNQ40_RS02070 (LNQ40_002070) | 459222..460370 | - | 1149 | Protein_399 | McrC family protein | - |
| LNQ40_RS02075 (LNQ40_002075) | 460436..461586 | + | 1151 | WP_087931031.1 | IS3 family transposase ISSpr1 | Transposase |
| LNQ40_RS02080 (LNQ40_002080) | 461630..462490 | + | 861 | WP_245759121.1 | toll/interleukin-1 receptor domain-containing protein | - |
| LNQ40_RS02085 (LNQ40_002085) | 462566..462874 | + | 309 | WP_038245765.1 | hypothetical protein | - |
| LNQ40_RS02090 (LNQ40_002090) | 462922..463374 | + | 453 | Protein_403 | Prophage integrase IntA ; Integrase | Integrase |
| LNQ40_RS02095 (LNQ40_002095) | 463548..463802 | + | 255 | WP_005175264.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| LNQ40_RS02100 (LNQ40_002100) | 463792..464082 | + | 291 | WP_071666901.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| LNQ40_RS02105 (LNQ40_002105) | 464346..464735 | + | 390 | WP_049689831.1 | restriction endonuclease subunit S | - |
| LNQ40_RS02110 (LNQ40_002110) | 464859..465434 | + | 576 | WP_038245760.1 | DarT ssDNA thymidine ADP-ribosyltransferase family protein | - |
| LNQ40_RS02115 (LNQ40_002115) | 465437..466093 | + | 657 | WP_038245758.1 | DUF4433 domain-containing protein | Toxin Detail |
| LNQ40_RS02120 (LNQ40_002120) | 466090..467157 | + | 1068 | WP_038245756.1 | macro domain-containing protein | Antitoxin Detail |
| LNQ40_RS02125 (LNQ40_002125) | 467178..467444 | + | 267 | Protein_410 | hypothetical protein | - |
| LNQ40_RS02130 (LNQ40_002130) | 467463..467861 | - | 399 | Protein_411 | integrase core domain-containing protein | - |
| LNQ40_RS02135 (LNQ40_002135) | 467860..468156 | + | 297 | Protein_412 | IS3 family transposase IS1400 | Transposase |
| LNQ40_RS02140 (LNQ40_002140) | 468185..468290 | - | 106 | Protein_413 | transposase | - |
| LNQ40_RS02145 (LNQ40_002145) | 468304..468432 | - | 129 | Protein_414 | helix-turn-helix domain-containing protein | - |
| LNQ40_RS02150 (LNQ40_002150) | 468582..468812 | + | 231 | Protein_415 | DUF4942 domain-containing protein | - |
| LNQ40_RS02155 (LNQ40_002155) | 468887..469282 | + | 396 | WP_038245317.1 | DUF6088 family protein | - |
| LNQ40_RS02160 (LNQ40_002160) | 469275..470224 | + | 950 | Protein_417 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | - |
| LNQ40_RS02165 (LNQ40_002165) | 470592..470717 | + | 126 | Protein_418 | antirestriction protein | - |
| LNQ40_RS02170 (LNQ40_002170) | 470743..470916 | + | 174 | Protein_419 | type IV toxin-antitoxin system YeeU family antitoxin | - |
| LNQ40_RS02175 (LNQ40_002175) | 471519..472673 | + | 1155 | WP_038245380.1 | N-acetylneuraminate epimerase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|