MGE detailed information
MGE type: IScluster/Tn MGE length: 6197 bp
Accession: NZ_CP099813 Location: 3127335..3133531 Organism: Yersinia ruckeri strain NVI-492 Replicon: chromosome
Accession: NZ_CP099813 Location: 3127335..3133531 Organism: Yersinia ruckeri strain NVI-492 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LNQ24_RS13975 (LNQ24_013970) | 3122815..3123969 | - | 1155 | WP_038245380.1 | N-acetylneuraminate epimerase | - |
| LNQ24_RS13980 (LNQ24_013975) | 3124572..3124745 | - | 174 | Protein_2707 | type IV toxin-antitoxin system YeeU family antitoxin | - |
| LNQ24_RS13985 (LNQ24_013980) | 3124771..3124896 | - | 126 | Protein_2708 | antirestriction protein | - |
| LNQ24_RS13990 (LNQ24_013985) | 3125266..3126216 | - | 951 | WP_248577550.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | Toxin Detail |
| LNQ24_RS13995 (LNQ24_013990) | 3126209..3126604 | - | 396 | WP_038245317.1 | DUF6088 family protein | Antitoxin Detail |
| LNQ24_RS14000 (LNQ24_013995) | 3126679..3126909 | - | 231 | Protein_2711 | DUF4942 domain-containing protein | - |
| LNQ24_RS14005 (LNQ24_014000) | 3127059..3127187 | + | 129 | Protein_2712 | helix-turn-helix domain-containing protein | - |
| LNQ24_RS14010 (LNQ24_014005) | 3127201..3127306 | + | 106 | Protein_2713 | transposase | - |
| LNQ24_RS14015 (LNQ24_014010) | 3127335..3127631 | - | 297 | Protein_2714 | IS3 family transposase IS1400 | Transposase |
| LNQ24_RS14020 (LNQ24_014015) | 3127630..3128028 | + | 399 | Protein_2715 | integrase core domain-containing protein | - |
| LNQ24_RS14025 (LNQ24_014020) | 3128047..3128333 | - | 287 | Protein_2716 | hypothetical protein | - |
| LNQ24_RS14030 (LNQ24_014025) | 3128354..3129421 | - | 1068 | WP_038275274.1 | macro domain-containing protein | Antitoxin Detail |
| LNQ24_RS14035 (LNQ24_014030) | 3129418..3130074 | - | 657 | WP_096823271.1 | DUF4433 domain-containing protein | Toxin Detail |
| LNQ24_RS14040 (LNQ24_014035) | 3130077..3130652 | - | 576 | WP_071706520.1 | DarT ssDNA thymidine ADP-ribosyltransferase family protein | - |
| LNQ24_RS14045 (LNQ24_014040) | 3130776..3131165 | - | 390 | WP_248577710.1 | restriction endonuclease subunit S | - |
| LNQ24_RS14050 (LNQ24_014045) | 3131429..3131719 | - | 291 | WP_248577711.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| LNQ24_RS14055 (LNQ24_014050) | 3131709..3131963 | - | 255 | WP_005175264.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| LNQ24_RS14060 (LNQ24_014055) | 3132137..3132349 | - | 213 | Protein_2723 | integrase | - |
| LNQ24_RS14065 (LNQ24_014060) | 3132381..3133531 | - | 1151 | Protein_2724 | IS3 family transposase ISEal1 | Transposase |
| LNQ24_RS14070 (LNQ24_014065) | 3133558..3133851 | - | 294 | WP_248577580.1 | hypothetical protein | - |
| LNQ24_RS14075 (LNQ24_014070) | 3133837..3134805 | + | 969 | WP_248577581.1 | hypothetical protein | - |
| LNQ24_RS14080 (LNQ24_014075) | 3134834..3135018 | - | 185 | Protein_2727 | peptidase T | - |
| LNQ24_RS14085 (LNQ24_014080) | 3135266..3137701 | + | 2436 | WP_248577582.1 | DEAD/DEAH box helicase family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|