MGE detailed information
MGE type: Prophage MGE length: 32281 bp
Accession: NZ_CP099809 Location: 3152928..3185208 Organism: Yersinia ruckeri strain NVI-10587 Replicon: chromosome
Accession: NZ_CP099809 Location: 3152928..3185208 Organism: Yersinia ruckeri strain NVI-10587 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LNQ46_RS14390 (LNQ46_014385) | 3148416..3149570 | - | 1155 | WP_038245380.1 | N-acetylneuraminate epimerase | - |
| LNQ46_RS14395 (LNQ46_014390) | 3150173..3150346 | - | 174 | Protein_2791 | type IV toxin-antitoxin system YeeU family antitoxin | - |
| LNQ46_RS14400 (LNQ46_014395) | 3150372..3150497 | - | 126 | Protein_2792 | antirestriction protein | - |
| LNQ46_RS14405 (LNQ46_014400) | 3150865..3151815 | - | 951 | WP_038275283.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | - |
| LNQ46_RS14410 (LNQ46_014405) | 3151808..3152203 | - | 396 | WP_038245317.1 | DUF6088 family protein | - |
| LNQ46_RS14415 (LNQ46_014410) | 3152278..3152508 | - | 231 | Protein_2795 | DUF4942 domain-containing protein | - |
| LNQ46_RS14420 (LNQ46_014415) | 3152658..3152786 | + | 129 | Protein_2796 | helix-turn-helix domain-containing protein | - |
| LNQ46_RS14425 (LNQ46_014420) | 3152779..3152899 | + | 121 | Protein_2797 | transposase | - |
| LNQ46_RS14430 (LNQ46_014425) | 3152928..3153224 | - | 297 | Protein_2798 | IS3 family transposase IS1400 | Transposase |
| LNQ46_RS14435 (LNQ46_014430) | 3153223..3153621 | + | 399 | Protein_2799 | integrase core domain-containing protein | - |
| LNQ46_RS14440 (LNQ46_014435) | 3153640..3153906 | - | 267 | Protein_2800 | hypothetical protein | - |
| LNQ46_RS14445 (LNQ46_014440) | 3153927..3154994 | - | 1068 | WP_096823272.1 | macro domain-containing protein | Antitoxin Detail |
| LNQ46_RS14450 (LNQ46_014445) | 3154991..3155647 | - | 657 | WP_096823271.1 | DUF4433 domain-containing protein | Toxin Detail |
| LNQ46_RS14455 (LNQ46_014450) | 3155650..3156225 | - | 576 | WP_071706520.1 | DarT ssDNA thymidine ADP-ribosyltransferase family protein | - |
| LNQ46_RS14460 (LNQ46_014455) | 3156349..3156738 | - | 390 | WP_248578898.1 | restriction endonuclease subunit S | - |
| LNQ46_RS14465 (LNQ46_014460) | 3157002..3157292 | - | 291 | WP_038275268.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| LNQ46_RS14470 (LNQ46_014465) | 3157282..3157536 | - | 255 | WP_005175264.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| LNQ46_RS14475 (LNQ46_014470) | 3157710..3158969 | - | 1260 | Protein_2807 | integrase arm-type DNA-binding domain-containing protein | - |
| LNQ46_RS14480 (LNQ46_014475) | 3159483..3160427 | + | 945 | WP_248578899.1 | hypothetical protein | - |
| LNQ46_RS14490 (LNQ46_014485) | 3161953..3162393 | - | 441 | WP_248578901.1 | hypothetical protein | - |
| LNQ46_RS14500 (LNQ46_014495) | 3163724..3165073 | - | 1350 | WP_248578732.1 | restriction endonuclease subunit S | - |
| LNQ46_RS14505 (LNQ46_014500) | 3165073..3166692 | - | 1620 | WP_248578731.1 | N-6 DNA methylase | - |
| LNQ46_RS14510 (LNQ46_014505) | 3166772..3170296 | - | 3525 | WP_248578730.1 | type I restriction-modification system endonuclease | - |
| LNQ46_RS14515 (LNQ46_014510) | 3170630..3171892 | - | 1263 | Protein_2815 | Prophage integrase IntA ; Integrase | Integrase |
| LNQ46_RS14525 (LNQ46_014520) | 3172279..3173349 | - | 1071 | WP_248578729.1 | LPS export ABC transporter permease LptG | - |
| LNQ46_RS14530 (LNQ46_014525) | 3173349..3174443 | - | 1095 | WP_038241733.1 | LPS export ABC transporter permease LptF | - |
| LNQ46_RS14535 (LNQ46_014530) | 3174723..3176234 | + | 1512 | WP_004720452.1 | leucyl aminopeptidase | - |
| LNQ46_RS14540 (LNQ46_014535) | 3176357..3176806 | + | 450 | WP_004720451.1 | DNA polymerase III subunit chi | - |
| LNQ46_RS14545 (LNQ46_014540) | 3176820..3179696 | + | 2877 | WP_004720449.1 | valine--tRNA ligase | - |
| LNQ46_RS14550 (LNQ46_014545) | 3179952..3180455 | + | 504 | WP_004720447.1 | GNAT family N-acetyltransferase | - |
| LNQ46_RS14555 (LNQ46_014550) | 3180547..3180978 | - | 432 | WP_038241737.1 | ribonuclease E inhibitor RraB | - |
| LNQ46_RS14560 (LNQ46_014555) | 3181151..3182158 | + | 1008 | WP_004720443.1 | Ornithine carbamoyltransferase subunit I | VF |
| LNQ46_RS14565 (LNQ46_014560) | 3182528..3184666 | + | 2139 | WP_004720441.1 | anaerobic ribonucleoside-triphosphate reductase | - |
| LNQ46_RS14570 (LNQ46_014565) | 3184744..3185208 | + | 465 | WP_038241742.1 | anaerobic ribonucleoside-triphosphate reductase-activating protein | - |
| LNQ46_RS14575 (LNQ46_014570) | 3185637..3186089 | + | 453 | WP_038241743.1 | phosphonate C-P lyase system protein PhnG | - |
| LNQ46_RS14580 (LNQ46_014575) | 3186089..3186670 | + | 582 | WP_038241745.1 | phosphonate C-P lyase system protein PhnH | - |
| LNQ46_RS14585 (LNQ46_014580) | 3186670..3187746 | + | 1077 | WP_038275226.1 | carbon-phosphorus lyase complex subunit PhnI | - |
| LNQ46_RS14590 (LNQ46_014585) | 3187739..3188611 | + | 873 | WP_234055611.1 | alpha-D-ribose 1-methylphosphonate 5-phosphate C-P-lyase PhnJ | - |
| LNQ46_RS14595 (LNQ46_014590) | 3188611..3189402 | + | 792 | WP_038241755.1 | phosphonate C-P lyase system protein PhnK | - |
| LNQ46_RS14600 (LNQ46_014595) | 3189444..3190163 | + | 720 | WP_038241937.1 | phosphonate C-P lyase system protein PhnL | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|