MGE detailed information
MGE type: Genomic_island MGE length: 10427 bp
Accession: NZ_CP099705 Location: 1025215..1035641 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain 013+ Replicon: chromosome
Accession: NZ_CP099705 Location: 1025215..1035641 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain 013+ Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NG892_RS04945 (1020328) | 1020328..1020708 | + | 381 | WP_001070479.1 | DUF4440 domain-containing protein | - |
| NG892_RS04950 (1020764) | 1020764..1023331 | - | 2568 | WP_001005807.1 | DNA mismatch repair protein MutS | - |
| NG892_RS04955 (1023490) | 1023490..1024011 | + | 522 | WP_000858988.1 | hypothetical protein | - |
| NG892_RS04960 (1024183) | 1024183..1024839 | - | 657 | WP_000420452.1 | protein-serine/threonine phosphatase | - |
| NG892_RS04965 (1025186) | 1025186..1025391 | + | 206 | Protein_974 | IS5 family transposase ISEcl3 | Transposase |
| NG892_RS04970 (1025464) | 1025464..1025991 | - | 528 | WP_000971655.1 | GNAT family N-acetyltransferase | Toxin Detail |
| NG892_RS04975 (1025988) | 1025988..1026278 | - | 291 | WP_000855692.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| NG892_RS04980 (1026548) | 1026548..1026726 | - | 179 | Protein_977 | IS3 family transposase | - |
| NG892_RS04985 (1026967) | 1026967..1027293 | + | 327 | WP_000393302.1 | hypothetical protein | - |
| NG892_RS04990 (1027566) | 1027566..1027913 | - | 348 | WP_001669174.1 | DUF1493 family protein | - |
| NG892_RS04995 (1027898) | 1027898..1028347 | - | 450 | WP_000381610.1 | membrane protein | - |
| NG892_RS05000 (1028778) | 1028778..1029221 | - | 444 | WP_000715092.1 | hypothetical protein | VF |
| NG892_RS05005 (1029678) | 1029678..1030328 | + | 651 | WP_001674874.1 | hypothetical protein | VF |
| NG892_RS05010 (1030325) | 1030325..1032013 | + | 1689 | WP_000848113.1 | hypothetical protein | VF |
| NG892_RS05015 (1032010) | 1032010..1033128 | + | 1119 | WP_080247882.1 | hypothetical protein | VF |
| NG892_RS05020 (1033153) | 1033153..1035210 | + | 2058 | WP_000927219.1 | hypothetical protein | VF |
| NG892_RS05025 (1035234) | 1035234..1035641 | + | 408 | WP_001164066.1 | hypothetical protein | VF |
| NG892_RS05030 (1035638) | 1035638..1036933 | + | 1296 | WP_000856766.1 | SctN family type III secretion system ATPase InvC | - |
| NG892_RS05035 (1036911) | 1036911..1037354 | + | 444 | WP_001520714.1 | SPI-1 type III secretion system protein SpaM | - |
| NG892_RS05040 (1037354) | 1037354..1038364 | + | 1011 | WP_000503098.1 | SPI-1 type III secretion system protein SpaN | - |
| NG892_RS05045 (1038364) | 1038364..1039275 | + | 912 | WP_000058734.1 | SPI-1 type III secretion system protein SpaO | - |
| NG892_RS05050 (1039265) | 1039265..1039939 | + | 675 | WP_000526016.1 | SPI-1 type III secretion system export apparatus protein SpaP | - |
| NG892_RS05055 (1039965) | 1039965..1040225 | + | 261 | WP_000342503.1 | SPI-1 type III secretion system export apparatus protein SpaQ | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Genomic island | TA10052 | UFRD01000002 | 4599654..4610080 | 0 |