MGE detailed information
MGE type: Prophage MGE length: 38503 bp
Accession: NZ_CP099506 Location: 1562899..1601401 Organism: Staphylococcus aureus strain 0316-H-5A Replicon: chromosome
Accession: NZ_CP099506 Location: 1562899..1601401 Organism: Staphylococcus aureus strain 0316-H-5A Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LPT22_RS07655 (1558001) | 1558001..1558837 | - | 837 | WP_000886473.1 | membrane protein | - |
| LPT22_RS07660 (1558846) | 1558846..1560363 | - | 1518 | WP_000535846.1 | ABC transporter ATP-binding protein | - |
| LPT22_RS07665 (1560378) | 1560378..1560692 | - | 315 | WP_000435806.1 | YfhH family protein | - |
| LPT22_RS07670 (1560670) | 1560670..1561488 | - | 819 | WP_001124416.1 | recombination regulator RecX | - |
| LPT22_RS07675 (1561749) | 1561749..1562558 | - | 810 | WP_000830380.1 | monofunctional peptidoglycan glycosyltransferase SgtB | - |
| LPT22_RS07680 (1562899) | 1562899..1563414 | - | 516 | WP_000163283.1 | type 1 glutamine amidotransferase domain-containing protein | - |
| LPT22_RS07685 (1563544) | 1563544..1563705 | - | 162 | WP_001005407.1 | SE1561 family protein | - |
| LPT22_RS07690 (1564052) | 1564052..1564132 | + | 81 | WP_100250272.1 | hypothetical protein | - |
| LPT22_RS07695 (1564862) | 1564862..1565362 | + | 501 | WP_113559807.1 | hypothetical protein | - |
| LPT22_RS07700 (1565452) | 1565452..1566897 | - | 1446 | WP_031886331.1 | SH3 domain-containing protein | - |
| LPT22_RS07705 (1566878) | 1566878..1567315 | - | 438 | WP_031886332.1 | phage holin | - |
| LPT22_RS07710 (1567366) | 1567366..1567473 | + | 108 | Protein_1479 | hypothetical protein | - |
| - (1567395) | 1567395..1567488 | + | 94 | NuclAT_0 | - | Antitoxin Detail |
| - (1567395) | 1567395..1567488 | + | 94 | NuclAT_0 | - | Antitoxin Detail |
| - (1567395) | 1567395..1567488 | + | 94 | NuclAT_0 | - | Antitoxin Detail |
| - (1567395) | 1567395..1567488 | + | 94 | NuclAT_0 | - | Antitoxin Detail |
| LPT22_RS07715 (1567513) | 1567513..1567620 | - | 108 | WP_000253687.1 | putative holin-like toxin | Toxin Detail |
| LPT22_RS07720 (1567857) | 1567857..1568156 | - | 300 | WP_031886333.1 | DUF2951 domain-containing protein | - |
| LPT22_RS07725 (1568205) | 1568205..1568354 | - | 150 | WP_162783876.1 | hypothetical protein | - |
| LPT22_RS07730 (1568341) | 1568341..1570527 | - | 2187 | WP_031886334.1 | phage tail protein | - |
| LPT22_RS07735 (1570543) | 1570543..1571658 | - | 1116 | WP_031886335.1 | hypothetical protein | - |
| LPT22_RS07740 (1571675) | 1571675..1572628 | - | 954 | WP_031886336.1 | phage tail family protein | - |
| LPT22_RS07745 (1572651) | 1572651..1576310 | - | 3660 | WP_049949213.1 | hypothetical protein | - |
| LPT22_RS07750 (1576303) | 1576303..1576680 | - | 378 | WP_031886337.1 | hypothetical protein | - |
| LPT22_RS07755 (1576725) | 1576725..1577090 | - | 366 | WP_229360498.1 | tail assembly chaperone | - |
| LPT22_RS07760 (1577164) | 1577164..1577724 | - | 561 | WP_049949214.1 | phage major tail protein, TP901-1 family | - |
| LPT22_RS07765 (1577742) | 1577742..1578128 | - | 387 | WP_031886340.1 | hypothetical protein | - |
| LPT22_RS07770 (1578139) | 1578139..1578480 | - | 342 | WP_031886341.1 | HK97 gp10 family phage protein | - |
| LPT22_RS07775 (1578480) | 1578480..1578755 | - | 276 | WP_150530786.1 | hypothetical protein | - |
| LPT22_RS07780 (1578779) | 1578779..1579108 | - | 330 | WP_031886343.1 | phage head-tail connector protein | - |
| LPT22_RS07785 (1579118) | 1579118..1579357 | - | 240 | WP_031886344.1 | hypothetical protein | - |
| LPT22_RS07790 (1579372) | 1579372..1580277 | - | 906 | WP_031886345.1 | hypothetical protein | - |
| LPT22_RS07795 (1580463) | 1580463..1580930 | - | 468 | Protein_1496 | DUF4355 domain-containing protein | - |
| LPT22_RS14025 (1581042) | 1581042..1581173 | - | 132 | WP_255777531.1 | hypothetical protein | - |
| LPT22_RS07800 (1581258) | 1581258..1582223 | - | 966 | WP_031886347.1 | minor capsid protein | - |
| LPT22_RS07805 (1582207) | 1582207..1583664 | - | 1458 | WP_031886348.1 | phage portal protein | - |
| LPT22_RS07810 (1583676) | 1583676..1584950 | - | 1275 | WP_031886349.1 | PBSX family phage terminase large subunit | - |
| LPT22_RS07815 (1584937) | 1584937..1585383 | - | 447 | WP_031886350.1 | terminase small subunit | - |
| LPT22_RS07820 (1585732) | 1585732..1586133 | - | 402 | WP_031886352.1 | hypothetical protein | - |
| LPT22_RS07825 (1586134) | 1586134..1586307 | - | 174 | WP_000595257.1 | transcriptional activator RinB | - |
| LPT22_RS07830 (1586304) | 1586304..1586690 | - | 387 | WP_000592207.1 | hypothetical protein | - |
| LPT22_RS07835 (1586687) | 1586687..1586893 | - | 207 | WP_015988673.1 | DUF1381 domain-containing protein | - |
| LPT22_RS07840 (1586930) | 1586930..1587463 | - | 534 | WP_000185642.1 | dUTP pyrophosphatase | - |
| LPT22_RS07845 (1587456) | 1587456..1587626 | - | 171 | WP_000714406.1 | hypothetical protein | - |
| LPT22_RS07850 (1587613) | 1587613..1587867 | - | 255 | WP_001065104.1 | DUF1024 family protein | - |
| LPT22_RS07855 (1587860) | 1587860..1588168 | - | 309 | WP_000144708.1 | hypothetical protein | - |
| LPT22_RS07860 (1588165) | 1588165..1588512 | - | 348 | WP_000979209.1 | YopX family protein | - |
| LPT22_RS07865 (1588509) | 1588509..1588910 | - | 402 | WP_078099874.1 | hypothetical protein | - |
| LPT22_RS07870 (1588907) | 1588907..1589359 | - | 453 | WP_000982706.1 | YopX family protein | - |
| LPT22_RS07875 (1589356) | 1589356..1589550 | - | 195 | WP_000983953.1 | hypothetical protein | - |
| LPT22_RS07880 (1589547) | 1589547..1589951 | - | 405 | WP_031886354.1 | hypothetical protein | - |
| LPT22_RS07885 (1589954) | 1589954..1590160 | - | 207 | WP_000693989.1 | hypothetical protein | - |
| LPT22_RS07890 (1590174) | 1590174..1590422 | - | 249 | WP_060474161.1 | SAV1978 family virulence-associated passenger protein | - |
| LPT22_RS07895 (1590422) | 1590422..1590676 | - | 255 | WP_000022719.1 | DUF3310 domain-containing protein | - |
| LPT22_RS07900 (1590676) | 1590676..1591293 | - | 618 | WP_000907339.1 | SA1788 family PVL leukocidin-associated protein | - |
| LPT22_RS07905 (1591294) | 1591294..1591479 | - | 186 | WP_031886355.1 | DUF3113 family protein | - |
| LPT22_RS07910 (1591484) | 1591484..1591888 | - | 405 | WP_000049789.1 | DUF1064 domain-containing protein | - |
| LPT22_RS07915 (1591899) | 1591899..1592120 | - | 222 | WP_001123692.1 | DUF3269 family protein | - |
| LPT22_RS07920 (1592133) | 1592133..1592291 | - | 159 | WP_000628839.1 | hypothetical protein | - |
| LPT22_RS07925 (1592288) | 1592288..1593073 | - | 786 | WP_024273306.1 | ATP-binding protein | - |
| LPT22_RS07930 (1593086) | 1593086..1593907 | - | 822 | WP_031886356.1 | phage replisome organizer N-terminal domain-containing protein | - |
| LPT22_RS07935 (1593879) | 1593879..1594574 | - | 696 | WP_001121808.1 | putative HNHc nuclease | - |
| LPT22_RS07940 (1594588) | 1594588..1595016 | - | 429 | WP_031886357.1 | single-stranded DNA-binding protein | - |
| LPT22_RS07945 (1595016) | 1595016..1595639 | - | 624 | WP_000139720.1 | DUF1071 domain-containing protein | - |
| LPT22_RS07950 (1595632) | 1595632..1595853 | - | 222 | WP_000815401.1 | DUF2483 family protein | - |
| LPT22_RS07955 (1595863) | 1595863..1596123 | - | 261 | WP_031886358.1 | DUF1108 family protein | - |
| LPT22_RS07960 (1596128) | 1596128..1596430 | - | 303 | WP_000165363.1 | DUF2482 family protein | - |
| LPT22_RS07965 (1596523) | 1596523..1596684 | - | 162 | WP_000066017.1 | DUF1270 domain-containing protein | - |
| LPT22_RS07970 (1596677) | 1596677..1596898 | - | 222 | WP_000594790.1 | hypothetical protein | - |
| LPT22_RS07975 (1596970) | 1596970..1597623 | + | 654 | WP_031886359.1 | hypothetical protein | - |
| LPT22_RS07980 (1597633) | 1597633..1597776 | - | 144 | WP_000939498.1 | hypothetical protein | - |
| LPT22_RS07985 (1597805) | 1597805..1598581 | - | 777 | WP_001148544.1 | Rha family transcriptional regulator | - |
| LPT22_RS07990 (1598595) | 1598595..1598831 | - | 237 | WP_001121027.1 | helix-turn-helix transcriptional regulator | - |
| LPT22_RS07995 (1598983) | 1598983..1599297 | + | 315 | WP_000333630.1 | helix-turn-helix transcriptional regulator | Antitoxin Detail |
| LPT22_RS08000 (1599310) | 1599310..1599771 | + | 462 | WP_000525004.1 | hypothetical protein | Toxin Detail |
| LPT22_RS08005 (1599790) | 1599790..1600293 | + | 504 | WP_031886360.1 | hypothetical protein | - |
| LPT22_RS08010 (1600355) | 1600355..1601401 | + | 1047 | WP_031886361.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| LPT22_RS08015 (1601446) | 1601446..1602591 | + | 1146 | WP_031872285.1 | radical SAM/CxCxxxxC motif protein YfkAB | - |
| LPT22_RS08020 (1602853) | 1602853..1603383 | - | 531 | WP_000184383.1 | acyl-CoA thioesterase | - |
| LPT22_RS08025 (1603473) | 1603473..1604729 | - | 1257 | WP_001793428.1 | aminopeptidase | - |
| LPT22_RS08030 (1604732) | 1604732..1604932 | - | 201 | WP_000180460.1 | DUF1128 family protein | - |
| LPT22_RS08035 (1605079) | 1605079..1605543 | + | 465 | WP_000228666.1 | low molecular weight protein-tyrosine-phosphatase | - |
| LPT22_RS08040 (1605550) | 1605550..1605825 | + | 276 | WP_000428172.1 | YtxH domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|