MGE detailed information
MGE type: Conjugative plasmid MGE length: 116881 bp
Accession: NZ_CP099359 Location: 1..116881 Organism: Escherichia fergusonii strain RHB02-E1-C03 Replicon: plasmid unnamed1
Accession: NZ_CP099359 Location: 1..116881 Organism: Escherichia fergusonii strain RHB02-E1-C03 Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NFJ18_RS22815 (46) | 46..1077 | + | 1032 | WP_000907875.1 | plasmid replication initiator RepA | - |
| NFJ18_RS22820 (1773) | 1773..1931 | + | 159 | WP_000841008.1 | hypothetical protein | - |
| NFJ18_RS22825 (1986) | 1986..2255 | + | 270 | WP_000079928.1 | type II toxin-antitoxin system antitoxin YacA | Antitoxin Detail |
| NFJ18_RS22830 (2255) | 2255..2533 | + | 279 | WP_001384452.1 | type II toxin-antitoxin system toxin YacB | Toxin Detail |
| NFJ18_RS22835 (2573) | 2573..3421 | + | 849 | WP_001057996.1 | 3'-5' exonuclease | - |
| NFJ18_RS22840 (3658) | 3658..3783 | - | 126 | Protein_5 | MerR family transcriptional regulator | - |
| NFJ18_RS22845 (3778) | 3778..4392 | + | 615 | Protein_6 | helix-turn-helix domain-containing protein | - |
| NFJ18_RS22850 (4401) | 4401..5261 | + | 861 | WP_000493383.1 | EamA family transporter | - |
| NFJ18_RS22855 (5293) | 5293..6492 | - | 1200 | WP_181465503.1 | Tetracycline resistance protein, class C | VF |
| NFJ18_RS22860 (6598) | 6598..7248 | + | 651 | WP_181465513.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| NFJ18_RS22865 (7280) | 7280..7522 | - | 243 | WP_000844627.1 | transposase | - |
| NFJ18_RS22870 (8394) | 8394..9506 | + | 1113 | WP_001300563.1 | IS4 family transposase IS421 | Transposase |
| NFJ18_RS22875 (9874) | 9874..10308 | - | 435 | WP_000429836.1 | IS607 family transposase ISChh1 | Transposase |
| NFJ18_RS22880 (10380) | 10380..10730 | + | 351 | WP_001294663.1 | mercuric transport protein MerT | - |
| NFJ18_RS22885 (10744) | 10744..11019 | + | 276 | WP_000732292.1 | mercury resistance system periplasmic binding protein MerP | - |
| NFJ18_RS22890 (11055) | 11055..11477 | + | 423 | WP_001340589.1 | organomercurial transporter MerC | - |
| NFJ18_RS22895 (11529) | 11529..13223 | + | 1695 | WP_000105636.1 | mercury(II) reductase | - |
| NFJ18_RS22900 (13241) | 13241..13603 | + | 363 | WP_001277456.1 | mercury resistance co-regulator MerD | - |
| NFJ18_RS22905 (13600) | 13600..13836 | + | 237 | WP_000993386.1 | broad-spectrum mercury transporter MerE | - |
| NFJ18_RS22910 (13872) | 13872..14540 | + | 669 | WP_001300294.1 | putative signaling protein | VF |
| NFJ18_RS22915 (14615) | 14615..15865 | + | 1251 | Protein_20 | transposase | - |
| NFJ18_RS22920 (15930) | 15930..16634 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| NFJ18_RS22925 (16687) | 16687..16869 | - | 183 | Protein_22 | EAL domain-containing protein | - |
| NFJ18_RS22930 (17072) | 17072..18085 | - | 1014 | WP_000845048.1 | IS91 family transposase ISAzo26 | Transposase |
| NFJ18_RS22935 (18252) | 18252..19094 | + | 843 | WP_001456218.1 | alpha/beta fold putative hydrolase EstX | - |
| NFJ18_RS22940 (19241) | 19241..19798 | + | 558 | WP_134894556.1 | HAD family hydrolase | - |
| NFJ18_RS22945 (19856) | 19856..20694 | + | 839 | Protein_26 | Streptomycin 3''-adenylyltransferase | ARG |
| NFJ18_RS22950 (20909) | 20909..22168 | + | 1260 | WP_000095725.1 | chloramphenicol efflux MFS transporter CmlA1 | ARG |
| NFJ18_RS22955 (22261) | 22261..23099 | + | 839 | Protein_28 | Streptomycin 3''-adenylyltransferase | ARG |
| NFJ18_RS22960 (23222) | 23222..23554 | + | 333 | WP_000800531.1 | quaternary ammonium compound efflux SMR transporter QacL | - |
| NFJ18_RS22965 (23801) | 23801..24433 | - | 633 | WP_020802982.1 | IS256 family transposase IS406 | Transposase |
| NFJ18_RS22970 (24456) | 24456..24731 | + | 276 | WP_109023896.1 | hypothetical protein | - |
| NFJ18_RS22975 (24734) | 24734..25525 | - | 792 | WP_000034420.1 | Dihydropteroate synthase | ARG |
| NFJ18_RS22980 (25994) | 25994..26239 | - | 246 | WP_001354008.1 | GrpB family protein | - |
| NFJ18_RS22985 (26277) | 26277..27140 | - | 864 | WP_000612791.1 | SDR family oxidoreductase | - |
| NFJ18_RS22990 (27286) | 27286..27810 | - | 525 | Protein_35 | MFS transporter | - |
| NFJ18_RS22995 (27863) | 27863..28567 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| NFJ18_RS23000 (28568) | 28568..28767 | + | 200 | Protein_37 | helix-turn-helix domain-containing protein | - |
| NFJ18_RS23005 (28770) | 28770..31736 | + | 2967 | WP_001138064.1 | Tn3 family transposase TnpA_TnAs3 | Transposase |
| NFJ18_RS23010 (31745) | 31745..32161 | + | 417 | WP_031610367.1 | hypothetical protein | - |
| NFJ18_RS23015 (32638) | 32638..32904 | - | 267 | WP_000627831.1 | hypothetical protein | - |
| NFJ18_RS23020 (32904) | 32904..33398 | - | 495 | WP_181465532.1 | hypothetical protein | - |
| NFJ18_RS23025 (33454) | 33454..34056 | - | 603 | WP_000517689.1 | ProQ/FINO family protein | - |
| NFJ18_RS23030 (34410) | 34410..35756 | + | 1347 | WP_001132019.1 | protein YagA | - |
| NFJ18_RS23035 (36035) | 36035..37915 | + | 1881 | WP_001283356.1 | colicin Ia central receptor-binding domain-containing protein | - |
| NFJ18_RS23040 (37933) | 37933..38280 | - | 348 | WP_000762580.1 | colicin E1 family microcin immunity protein | - |
| NFJ18_RS23045 (38399) | 38399..38746 | + | 348 | WP_000142424.1 | DUF6404 family protein | - |
| NFJ18_RS23050 (38764) | 38764..39354 | - | 591 | WP_181465533.1 | hypothetical protein | - |
| NFJ18_RS23055 (39351) | 39351..39611 | - | 261 | WP_000343102.1 | hypothetical protein | - |
| NFJ18_RS23060 (40180) | 40180..40593 | + | 414 | WP_000465034.1 | hypothetical protein | - |
| NFJ18_RS23065 (40595) | 40595..41380 | + | 786 | WP_001164192.1 | site-specific integrase | - |
| NFJ18_RS23070 (41964) | 41964..42596 | + | 633 | WP_000312331.1 | ParA family protein | - |
| NFJ18_RS23075 (42596) | 42596..42970 | + | 375 | WP_000752652.1 | hypothetical protein | - |
| NFJ18_RS23080 (43209) | 43209..44183 | + | 975 | WP_001217836.1 | plasmid segregation protein ParM | - |
| NFJ18_RS23085 (44187) | 44187..44579 | + | 393 | WP_000272884.1 | plasmid partitioning/stability family protein | - |
| NFJ18_RS23090 (45260) | 45260..46162 | + | 903 | WP_001348079.1 | DUF1281 domain-containing protein | - |
| NFJ18_RS23095 (46166) | 46166..46471 | + | 306 | WP_001348080.1 | hypothetical protein | - |
| NFJ18_RS23100 (46547) | 46547..47230 | + | 684 | WP_000086147.1 | DNA methylase | - |
| NFJ18_RS23105 (47231) | 47231..47452 | + | 222 | WP_001104881.1 | hypothetical protein | - |
| NFJ18_RS23110 (47466) | 47466..47900 | + | 435 | WP_000274500.1 | DUF1380 family protein | - |
| NFJ18_RS23115 (47946) | 47946..48722 | + | 777 | WP_001005043.1 | hypothetical protein | - |
| NFJ18_RS23120 (49140) | 49140..49565 | + | 426 | WP_001198939.1 | antirestriction protein | - |
| NFJ18_RS23125 (49612) | 49612..50034 | + | 423 | WP_000271705.1 | DUF1380 family protein | - |
| NFJ18_RS23130 (50031) | 50031..50222 | + | 192 | WP_001027495.1 | hypothetical protein | - |
| NFJ18_RS23135 (50293) | 50293..50607 | + | 315 | WP_001434357.1 | hypothetical protein | - |
| NFJ18_RS23140 (50991) | 50991..51518 | + | 528 | WP_001276120.1 | single-stranded DNA-binding protein | - |
| NFJ18_RS23145 (51576) | 51576..51809 | + | 234 | WP_000006020.1 | DUF905 domain-containing protein | - |
| NFJ18_RS23150 (51868) | 51868..53826 | + | 1959 | WP_001145485.1 | ParB/RepB/Spo0J family partition protein | - |
| NFJ18_RS23155 (53881) | 53881..54315 | + | 435 | WP_001387500.1 | conjugation system SOS inhibitor PsiB | - |
| NFJ18_RS23160 (54312) | 54312..55031 | + | 720 | WP_001276270.1 | plasmid SOS inhibition protein A | - |
| NFJ18_RS23165 (55028) | 55028..55624 | + | 597 | WP_000977997.1 | hypothetical protein | - |
| NFJ18_RS23170 (56086) | 56086..56586 | + | 501 | WP_000117611.1 | antirestriction protein ArdA | - |
| NFJ18_RS23175 (57315) | 57315..57749 | + | 435 | WP_000218863.1 | hypothetical protein | - |
| NFJ18_RS23180 (57843) | 57843..58109 | + | 267 | WP_001247862.1 | hypothetical protein | - |
| NFJ18_RS23185 (58174) | 58174..59112 | + | 939 | WP_000078704.1 | ISNCY family transposase ISRor2 | VF |
| NFJ18_RS23190 (59135) | 59135..59332 | + | 198 | WP_001348086.1 | hypothetical protein | - |
| NFJ18_RS23195 (59363) | 59363..59614 | - | 252 | WP_000148285.1 | helix-turn-helix transcriptional regulator | - |
| NFJ18_RS23200 (60194) | 60194..61042 | + | 849 | WP_001077023.1 | DUF4942 domain-containing protein | - |
| NFJ18_RS23205 (61128) | 61128..61463 | - | 336 | WP_000157095.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| NFJ18_RS23210 (61696) | 61696..62028 | + | 333 | WP_001281051.1 | plasmid mobilization protein MobA | - |
| NFJ18_RS23215 (62039) | 62039..64738 | + | 2700 | WP_001354015.1 | hypothetical protein | Relaxase |
| NFJ18_RS23220 (64775) | 64775..67066 | - | 2292 | WP_001289276.1 | F-type conjugative transfer protein TrbC | - |
| NFJ18_RS23225 (67059) | 67059..68129 | - | 1071 | WP_000151583.1 | IncI1-type conjugal transfer protein TrbB | - |
| NFJ18_RS23230 (68148) | 68148..69356 | - | 1209 | WP_181465534.1 | IncI1-type conjugal transfer protein TrbA | - |
| - (69536) | 69536..69593 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| - (69536) | 69536..69593 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| - (69536) | 69536..69593 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| - (69536) | 69536..69593 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| NFJ18_RS23235 (69648) | 69648..69800 | + | 153 | WP_001331364.1 | Hok/Gef family protein | Toxin Detail |
| NFJ18_RS23240 (69872) | 69872..70123 | - | 252 | WP_001291965.1 | hypothetical protein | - |
| NFJ18_RS23245 (70624) | 70624..70719 | + | 96 | WP_000609148.1 | DinQ-like type I toxin DqlB | - |
| NFJ18_RS23250 (70784) | 70784..70960 | - | 177 | WP_001054904.1 | hypothetical protein | - |
| NFJ18_RS23255 (71352) | 71352..71561 | + | 210 | WP_000062603.1 | HEAT repeat domain-containing protein | - |
| NFJ18_RS23260 (71633) | 71633..72295 | - | 663 | WP_000653334.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| NFJ18_RS23265 (72360) | 72360..74522 | - | 2163 | WP_000698351.1 | DotA/TraY family protein | - |
| NFJ18_RS23270 (74619) | 74619..75203 | - | 585 | WP_001037987.1 | IncI1-type conjugal transfer protein TraX | - |
| NFJ18_RS23275 (75232) | 75232..76434 | - | 1203 | WP_001189160.1 | IncI1-type conjugal transfer protein TraW | - |
| NFJ18_RS23280 (76401) | 76401..77015 | - | 615 | WP_000337398.1 | IncI1-type conjugal transfer protein TraV | - |
| NFJ18_RS23285 (77015) | 77015..80059 | - | 3045 | WP_001024780.1 | IncI1-type conjugal transfer protein TraU | - |
| NFJ18_RS23290 (80149) | 80149..80949 | - | 801 | WP_001164788.1 | IncI1-type conjugal transfer protein TraT | - |
| NFJ18_RS23295 (80933) | 80933..81121 | - | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| NFJ18_RS23300 (81185) | 81185..81589 | - | 405 | WP_000086957.1 | IncI1-type conjugal transfer protein TraR | - |
| NFJ18_RS23305 (81640) | 81640..82167 | - | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| NFJ18_RS23310 (82167) | 82167..82871 | - | 705 | WP_000801920.1 | IncI1-type conjugal transfer protein TraP | - |
| NFJ18_RS23315 (82871) | 82871..84160 | - | 1290 | WP_001272005.1 | conjugal transfer protein TraO | - |
| NFJ18_RS23320 (84163) | 84163..85146 | - | 984 | WP_001191877.1 | hypothetical protein | VF |
| NFJ18_RS23325 (85157) | 85157..85849 | - | 693 | WP_000138548.1 | DotI/IcmL family type IV secretion protein | - |
| NFJ18_RS23330 (85846) | 85846..86193 | - | 348 | WP_001055900.1 | conjugal transfer protein | - |
| NFJ18_RS23335 (86211) | 86211..89978 | - | 3768 | WP_001141529.1 | DUF5710 domain-containing protein | - |
| NFJ18_RS23340 (90068) | 90068..90619 | - | 552 | WP_000014583.1 | Phospholipase D | VF |
| NFJ18_RS23345 (90634) | 90634..90924 | - | 291 | WP_001299214.1 | hypothetical protein | - |
| NFJ18_RS23350 (90921) | 90921..92069 | - | 1149 | WP_001024972.1 | putative protein YggR | VF |
| NFJ18_RS23355 (92066) | 92066..92884 | - | 819 | WP_000646098.1 | hypothetical protein | VF |
| NFJ18_RS23360 (92881) | 92881..93339 | - | 459 | WP_001079808.1 | hypothetical protein | VF |
| NFJ18_RS23365 (93734) | 93734..94066 | - | 333 | Protein_110 | lipopolysaccharide core heptose(II)-phosphate phosphatase | - |
| NFJ18_RS23370 (94158) | 94158..95386 | + | 1229 | WP_164473239.1 | IS3 family transposase IS2 | Transposase |
| NFJ18_RS23375 (95379) | 95379..95654 | - | 276 | Protein_112 | histidine phosphatase family protein | - |
| NFJ18_RS23380 (95714) | 95714..96916 | - | 1203 | WP_000976351.1 | conjugal transfer protein TraF | - |
| NFJ18_RS23385 (97001) | 97001..97825 | - | 825 | WP_001238939.1 | conjugal transfer protein TraE | - |
| NFJ18_RS23390 (97976) | 97976..99130 | - | 1155 | WP_001139957.1 | site-specific integrase | - |
| NFJ18_RS23395 (99217) | 99217..99423 | + | 207 | WP_000008649.1 | hypothetical protein | - |
| NFJ18_RS23400 (100435) | 100435..101859 | - | 1425 | WP_001389385.1 | hypothetical protein | VF |
| NFJ18_RS23405 (101859) | 101859..102515 | - | 657 | WP_001193553.1 | hypothetical protein | VF |
| NFJ18_RS23410 (102500) | 102500..103060 | - | 561 | WP_000014116.1 | hypothetical protein | VF |
| NFJ18_RS23415 (103070) | 103070..103684 | - | 615 | WP_000959785.1 | hypothetical protein | VF |
| NFJ18_RS23420 (103702) | 103702..104799 | - | 1098 | WP_001208805.1 | hypothetical protein | VF |
| NFJ18_RS23425 (104812) | 104812..106206 | - | 1395 | WP_001292897.1 | hypothetical protein | VF |
| NFJ18_RS23430 (106376) | 106376..106828 | - | 453 | WP_001247336.1 | hypothetical protein | VF |
| NFJ18_RS23435 (106815) | 106815..108110 | - | 1296 | WP_000752774.1 | type 4b pilus protein PilO2 | - |
| NFJ18_RS23440 (108103) | 108103..109785 | - | 1683 | WP_000748143.1 | hypothetical protein | VF |
| NFJ18_RS23445 (109799) | 109799..110236 | - | 438 | WP_000539807.1 | hypothetical protein | VF |
| NFJ18_RS23450 (110236) | 110236..111303 | - | 1068 | WP_000742600.1 | hypothetical protein | VF |
| NFJ18_RS23455 (111977) | 111977..112429 | - | 453 | WP_000008893.1 | hypothetical protein | - |
| NFJ18_RS23460 (112472) | 112472..112726 | - | 255 | WP_001136192.1 | PilI type IV pilus biogenesis protein | - |
| NFJ18_RS23465 (112994) | 112994..113560 | - | 567 | WP_000776428.1 | protein TraD | - |
| NFJ18_RS23470 (113574) | 113574..114257 | - | 684 | WP_000213857.1 | conjugal transfer protein TraC | - |
| NFJ18_RS23475 (114511) | 114511..115044 | - | 534 | WP_001303319.1 | transcription termination/antitermination NusG family protein | - |
| NFJ18_RS23480 (115486) | 115486..115773 | - | 288 | WP_000074849.1 | conjugal transfer protein TraA | - |
| NFJ18_RS23485 (115691) | 115691..115921 | - | 231 | WP_228772074.1 | ash family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|