MGE detailed information
MGE type: Genomic_island MGE length: 26415 bp
Accession: NZ_CP099344 Location: 3403476..3429890 Organism: Escherichia marmotae strain RHB35-E2-C08 Replicon: chromosome
Accession: NZ_CP099344 Location: 3403476..3429890 Organism: Escherichia marmotae strain RHB35-E2-C08 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
NFK54_RS16620 (3400208) | 3400208..3400927 | - | 720 | WP_000611294.1 | two-component system response regulator DcuR | - |
NFK54_RS16625 (3400924) | 3400924..3402555 | - | 1632 | WP_001216442.1 | sensor histidine kinase | - |
NFK54_RS16630 (3402734) | 3402734..3402964 | + | 231 | WP_000371696.1 | 4Fe-4S mono-cluster protein YjdI | - |
NFK54_RS16635 (3402976) | 3402976..3403248 | + | 273 | WP_000405652.1 | GNAT family N-acetyltransferase | - |
NFK54_RS16640 (3403476) | 3403476..3403772 | + | 297 | WP_001517605.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
NFK54_RS16645 (3403799) | 3403799..3403972 | + | 174 | WP_001173345.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
NFK54_RS16650 (3404091) | 3404091..3405608 | - | 1518 | WP_001295074.1 | lysine--tRNA ligase | - |
NFK54_RS16655 (3405845) | 3405845..3407302 | - | 1458 | WP_001517606.1 | dipeptide/tripeptide permease DtpC | - |
NFK54_RS16660 (3407361) | 3407361..3409508 | - | 2148 | WP_001517607.1 | lysine decarboxylase CadA | - |
NFK54_RS16665 (3409588) | 3409588..3410922 | - | 1335 | WP_001517608.1 | cadaverine/lysine antiporter | - |
NFK54_RS16670 (3411286) | 3411286..3412824 | - | 1539 | WP_001187163.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
NFK54_RS16675 (3413613) | 3413613..3415148 | - | 1536 | WP_115440846.1 | hypothetical protein | VF |
NFK54_RS16680 (3415219) | 3415219..3415320 | - | 102 | Protein_3254 | DUF4942 domain-containing protein | - |
NFK54_RS16685 (3415628) | 3415628..3418741 | - | 3114 | WP_279283211.1 | hypothetical protein | VF |
NFK54_RS16690 (3419591) | 3419591..3419788 | - | 198 | WP_279283654.1 | hypothetical protein | - |
NFK54_RS16695 (3419816) | 3419816..3420013 | - | 198 | Protein_3257 | DUF5983 family protein | - |
NFK54_RS16700 (3420010) | 3420010..3420387 | - | 378 | WP_279283212.1 | TA system toxin CbtA family protein | Toxin Detail |
NFK54_RS16705 (3420477) | 3420477..3420845 | - | 369 | WP_024180636.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
NFK54_RS16710 (3420924) | 3420924..3421145 | - | 222 | WP_000692300.1 | DUF987 domain-containing protein | - |
NFK54_RS16715 (3421214) | 3421214..3421690 | - | 477 | WP_001186711.1 | RadC family protein | - |
NFK54_RS16720 (3421706) | 3421706..3422191 | - | 486 | WP_000206667.1 | antirestriction protein | - |
NFK54_RS16725 (3422283) | 3422283..3423101 | - | 819 | WP_001234700.1 | DUF932 domain-containing protein | - |
NFK54_RS16730 (3423192) | 3423192..3423425 | - | 234 | WP_001278282.1 | DUF905 family protein | - |
NFK54_RS16735 (3423431) | 3423431..3424108 | - | 678 | WP_001097414.1 | hypothetical protein | - |
NFK54_RS16740 (3424227) | 3424227..3425111 | - | 885 | WP_279283213.1 | 50S ribosome-binding GTPase | - |
NFK54_RS16745 (3425225) | 3425225..3426184 | + | 960 | WP_000147260.1 | hypothetical protein | - |
NFK54_RS16750 (3426241) | 3426241..3427044 | - | 804 | WP_001271557.1 | hypothetical protein | - |
NFK54_RS16755 (3429159) | 3429159..3429890 | + | 732 | WP_001543300.1 | inovirus Gp2 family protein | - |
NFK54_RS16760 (3429957) | 3429957..3430297 | - | 341 | Protein_3270 | integrase core domain-containing protein | - |
NFK54_RS16765 (3430405) | 3430405..3431349 | - | 945 | WP_001406210.1 | DNA-binding transcriptional regulator DsdC | - |
NFK54_RS16770 (3431566) | 3431566..3432903 | + | 1338 | WP_279283214.1 | D-serine transporter DsdX | - |
NFK54_RS16775 (3432921) | 3432921..3434249 | + | 1329 | WP_180349222.1 | D-serine ammonia-lyase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
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