MGE detailed information
MGE type: Conjugative plasmid MGE length: 108225 bp
Accession: NZ_CP099339 Location: 1..108225 Organism: Escherichia fergusonii strain RHB44-C01 Replicon: plasmid unnamed1
Accession: NZ_CP099339 Location: 1..108225 Organism: Escherichia fergusonii strain RHB44-C01 Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NFK94_RS21765 (46) | 46..1077 | + | 1032 | WP_000907870.1 | plasmid replication initiator RepA | - |
| NFK94_RS21770 (1773) | 1773..1913 | + | 141 | WP_160371920.1 | hypothetical protein | - |
| NFK94_RS21775 (2072) | 2072..2401 | + | 330 | WP_000493287.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| NFK94_RS21780 (2382) | 2382..2663 | + | 282 | WP_000780220.1 | helix-turn-helix transcriptional regulator | - |
| NFK94_RS21785 (3595) | 3595..3834 | + | 240 | WP_001353740.1 | DUF1819 family protein | - |
| NFK94_RS21790 (4022) | 4022..4999 | - | 978 | Protein_5 | Tyrosine recombinase XerC | VF |
| NFK94_RS21795 (5331) | 5331..5804 | + | 474 | WP_000777554.1 | Dihydrofolate reductase type 1 | ARG |
| NFK94_RS21800 (5899) | 5899..6423 | + | 525 | WP_000704156.1 | streptothricin N-acetyltransferase Sat2 | - |
| NFK94_RS21805 (6481) | 6481..7316 | + | 836 | Protein_8 | Streptomycin 3''-adenylyltransferase | ARG |
| NFK94_RS21810 (7576) | 7576..8436 | - | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| NFK94_RS21815 (8619) | 8619..9176 | - | 558 | WP_001235713.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| NFK94_RS21820 (9340) | 9340..12345 | + | 3006 | WP_001143760.1 | Tn3 family transposase TnpA_Tn3 | Transposase |
| NFK94_RS21825 (12378) | 12378..12791 | - | 414 | Protein_12 | IS91 family transposase ISSbo1 | Transposase |
| NFK94_RS21830 (12772) | 12772..13044 | - | 273 | WP_000019163.1 | hypothetical protein | - |
| NFK94_RS21835 (13258) | 13258..14073 | + | 816 | WP_001043260.1 | hypothetical protein | ARG |
| NFK94_RS21840 (14160) | 14160..14402 | + | 243 | Protein_15 | phosphoglucosamine mutase | - |
| NFK94_RS21845 (14638) | 14638..15783 | - | 1146 | Protein_16 | IS91 family transposase ISVsa3 | Transposase |
| NFK94_RS21850 (16141) | 16141..16410 | + | 270 | WP_000079941.1 | type II toxin-antitoxin system antitoxin YacA | Antitoxin Detail |
| NFK94_RS21855 (16410) | 16410..16688 | + | 279 | WP_244442846.1 | type II toxin-antitoxin system toxin YacB | Toxin Detail |
| NFK94_RS21860 (16728) | 16728..17576 | + | 849 | WP_021265674.1 | 3'-5' exonuclease | - |
| NFK94_RS21865 (17693) | 17693..18166 | + | 474 | WP_001334658.1 | hypothetical protein | - |
| NFK94_RS21870 (18643) | 18643..18909 | - | 267 | WP_000955263.1 | hypothetical protein | - |
| NFK94_RS21875 (18909) | 18909..19403 | - | 495 | WP_001459505.1 | hypothetical protein | - |
| NFK94_RS21880 (19459) | 19459..20061 | - | 603 | WP_000517695.1 | ProQ/FINO family protein | - |
| NFK94_RS21885 (20415) | 20415..21761 | + | 1347 | WP_001132032.1 | protein YagA | - |
| NFK94_RS21890 (22040) | 22040..23920 | + | 1881 | WP_001283341.1 | colicin Ia central receptor-binding domain-containing protein | - |
| NFK94_RS21895 (23938) | 23938..24285 | - | 348 | WP_000762570.1 | colicin 1B immunity protein | - |
| NFK94_RS21900 (24404) | 24404..24752 | + | 349 | Protein_27 | DUF6404 family protein | - |
| NFK94_RS21905 (24772) | 24772..25362 | - | 591 | WP_000194553.1 | hypothetical protein | - |
| NFK94_RS21910 (25362) | 25362..25619 | - | 258 | WP_000371888.1 | hypothetical protein | - |
| NFK94_RS21915 (25970) | 25970..26971 | + | 1002 | WP_000774874.1 | DUF4238 domain-containing protein | - |
| NFK94_RS21920 (27147) | 27147..27491 | - | 345 | WP_000793307.1 | hypothetical protein | - |
| NFK94_RS21925 (27990) | 27990..28244 | - | 255 | WP_000678527.1 | hypothetical protein | - |
| NFK94_RS21930 (28289) | 28289..29215 | - | 927 | WP_001290416.1 | hypothetical protein | - |
| NFK94_RS21935 (29747) | 29747..30160 | + | 414 | WP_000465043.1 | hypothetical protein | - |
| NFK94_RS21940 (30162) | 30162..30941 | + | 780 | WP_021537353.1 | site-specific integrase | - |
| NFK94_RS21945 (31121) | 31121..31765 | + | 645 | WP_001144036.1 | ParA family protein | - |
| NFK94_RS21950 (31852) | 31852..32160 | + | 309 | WP_000030199.1 | hypothetical protein | - |
| NFK94_RS21955 (32574) | 32574..33554 | + | 981 | WP_000688514.1 | plasmid segregation protein ParM | - |
| NFK94_RS21960 (33547) | 33547..33963 | + | 417 | WP_001278818.1 | plasmid partitioning/stability family protein | - |
| NFK94_RS21965 (33965) | 33965..34183 | - | 219 | Protein_40 | DUF4113 domain-containing protein | - |
| NFK94_RS21970 (34237) | 34237..34914 | + | 678 | WP_001339397.1 | IS66 family transposase ISCro1 | Transposase |
| NFK94_RS21975 (34914) | 34914..35261 | + | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| NFK94_RS21980 (35281) | 35281..36852 | + | 1572 | WP_000381387.1 | IS66 family transposase ISCro1 | Transposase |
| NFK94_RS21985 (36882) | 36882..37946 | - | 1065 | Protein_44 | translesion error-prone DNA polymerase V subunit UmuC | - |
| NFK94_RS21990 (37946) | 37946..38383 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| NFK94_RS21995 (38380) | 38380..38628 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| NFK94_RS22000 (39046) | 39046..39948 | + | 903 | WP_000273918.1 | DUF1281 domain-containing protein | - |
| NFK94_RS22005 (39945) | 39945..40256 | + | 312 | WP_010891263.1 | hypothetical protein | - |
| NFK94_RS22010 (40333) | 40333..41016 | + | 684 | WP_000086178.1 | DNA methylase | - |
| NFK94_RS22015 (41017) | 41017..41238 | + | 222 | WP_001104887.1 | hypothetical protein | - |
| NFK94_RS22020 (41198) | 41198..41684 | + | 487 | Protein_51 | DUF1380 family protein | - |
| NFK94_RS22025 (41735) | 41735..42505 | + | 771 | WP_001044393.1 | hypothetical protein | - |
| NFK94_RS22030 (42923) | 42923..43348 | + | 426 | WP_001198886.1 | antirestriction protein | - |
| NFK94_RS22035 (43395) | 43395..43817 | + | 423 | WP_000271729.1 | DUF1380 family protein | - |
| NFK94_RS22040 (43814) | 43814..44005 | + | 192 | WP_001027500.1 | hypothetical protein | - |
| NFK94_RS22045 (44775) | 44775..45302 | + | 528 | WP_001276110.1 | single-stranded DNA-binding protein | - |
| NFK94_RS22050 (45360) | 45360..45593 | + | 234 | WP_000006014.1 | DUF905 domain-containing protein | - |
| NFK94_RS22055 (45652) | 45652..47610 | + | 1959 | WP_021265661.1 | ParB/RepB/Spo0J family partition protein | - |
| NFK94_RS22060 (47665) | 47665..48099 | + | 435 | WP_000845897.1 | conjugation system SOS inhibitor PsiB | - |
| NFK94_RS22065 (48096) | 48096..48815 | + | 720 | WP_001276261.1 | plasmid SOS inhibition protein A | - |
| NFK94_RS22070 (48812) | 48812..49408 | + | 597 | WP_000978012.1 | hypothetical protein | - |
| NFK94_RS22075 (49871) | 49871..50371 | + | 501 | WP_000117609.1 | antirestriction protein ArdA | - |
| NFK94_RS22080 (51100) | 51100..51534 | + | 435 | WP_000218863.1 | hypothetical protein | - |
| NFK94_RS22085 (51626) | 51626..51892 | + | 267 | WP_001247862.1 | hypothetical protein | - |
| NFK94_RS22090 (51957) | 51957..52898 | + | 942 | WP_000038339.1 | ISNCY family transposase ISSen7 | VF |
| NFK94_RS22095 (52960) | 52960..53130 | + | 171 | WP_000150325.1 | hypothetical protein | - |
| NFK94_RS22100 (53161) | 53161..53412 | - | 252 | WP_000148285.1 | helix-turn-helix transcriptional regulator | - |
| NFK94_RS22105 (53992) | 53992..54840 | + | 849 | WP_001077047.1 | DUF4942 domain-containing protein | - |
| NFK94_RS22110 (54925) | 54925..55260 | - | 336 | WP_000157098.1 | hypothetical protein | - |
| NFK94_RS22115 (55494) | 55494..55826 | + | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| NFK94_RS22120 (55837) | 55837..58536 | + | 2700 | WP_279279849.1 | hypothetical protein | Relaxase |
| NFK94_RS22125 (58573) | 58573..60864 | - | 2292 | WP_001289276.1 | F-type conjugative transfer protein TrbC | - |
| NFK94_RS22130 (60857) | 60857..61927 | - | 1071 | WP_000151583.1 | IncI1-type conjugal transfer protein TrbB | - |
| NFK94_RS22135 (61946) | 61946..63154 | - | 1209 | WP_000121273.1 | IncI1-type conjugal transfer protein TrbA | - |
| - (63334) | 63334..63391 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| - (63334) | 63334..63391 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| - (63334) | 63334..63391 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| - (63334) | 63334..63391 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| NFK94_RS22140 (63446) | 63446..63598 | + | 153 | WP_001331364.1 | Hok/Gef family protein | Toxin Detail |
| NFK94_RS22145 (63670) | 63670..63921 | - | 252 | WP_001291964.1 | hypothetical protein | - |
| NFK94_RS22150 (64420) | 64420..64515 | + | 96 | WP_001303310.1 | DinQ-like type I toxin DqlB | - |
| NFK94_RS22155 (64580) | 64580..64756 | - | 177 | WP_001054904.1 | hypothetical protein | - |
| NFK94_RS22160 (65148) | 65148..65357 | + | 210 | WP_000062603.1 | HEAT repeat domain-containing protein | - |
| NFK94_RS22165 (65429) | 65429..66079 | - | 651 | WP_001178506.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| NFK94_RS22170 (66153) | 66153..68321 | - | 2169 | WP_021537350.1 | DotA/TraY family protein | - |
| NFK94_RS22175 (68418) | 68418..69002 | - | 585 | WP_001037987.1 | IncI1-type conjugal transfer protein TraX | - |
| NFK94_RS22180 (69031) | 69031..70233 | - | 1203 | WP_001189160.1 | IncI1-type conjugal transfer protein TraW | - |
| NFK94_RS22185 (70200) | 70200..70814 | - | 615 | WP_000337398.1 | IncI1-type conjugal transfer protein TraV | - |
| NFK94_RS22190 (70814) | 70814..73858 | - | 3045 | WP_021265678.1 | IncI1-type conjugal transfer protein TraU | - |
| NFK94_RS22195 (73948) | 73948..74748 | - | 801 | WP_001164788.1 | IncI1-type conjugal transfer protein TraT | - |
| NFK94_RS22200 (74732) | 74732..74920 | - | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| NFK94_RS22205 (74984) | 74984..75388 | - | 405 | WP_000086958.1 | IncI1-type conjugal transfer protein TraR | - |
| NFK94_RS22210 (75439) | 75439..75966 | - | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| NFK94_RS22215 (75966) | 75966..76670 | - | 705 | WP_000801920.1 | IncI1-type conjugal transfer protein TraP | - |
| NFK94_RS22220 (76670) | 76670..77959 | - | 1290 | WP_001272003.1 | conjugal transfer protein TraO | - |
| NFK94_RS22225 (77962) | 77962..78945 | - | 984 | WP_001191877.1 | hypothetical protein | VF |
| NFK94_RS22230 (78956) | 78956..79648 | - | 693 | WP_000138550.1 | DotI/IcmL family type IV secretion protein | - |
| NFK94_RS22235 (79645) | 79645..79992 | - | 348 | WP_001055900.1 | conjugal transfer protein | - |
| NFK94_RS22240 (80010) | 80010..83777 | - | 3768 | WP_001141527.1 | DUF5710 domain-containing protein | - |
| NFK94_RS22245 (83866) | 83866..84417 | - | 552 | WP_000014583.1 | Phospholipase D | VF |
| NFK94_RS22250 (84432) | 84432..84722 | - | 291 | WP_001299214.1 | hypothetical protein | - |
| NFK94_RS22255 (84719) | 84719..85867 | - | 1149 | WP_001024972.1 | putative protein YggR | VF |
| NFK94_RS22260 (85864) | 85864..86682 | - | 819 | WP_000646098.1 | hypothetical protein | VF |
| NFK94_RS22265 (86679) | 86679..87137 | - | 459 | WP_001079808.1 | hypothetical protein | VF |
| NFK94_RS22270 (87532) | 87532..88116 | - | 585 | WP_000977522.1 | histidine phosphatase family protein | - |
| NFK94_RS22275 (88176) | 88176..89378 | - | 1203 | WP_000976351.1 | conjugal transfer protein TraF | - |
| NFK94_RS22280 (89463) | 89463..90287 | - | 825 | WP_001238939.1 | conjugal transfer protein TraE | - |
| NFK94_RS22285 (90438) | 90438..91592 | - | 1155 | WP_001139957.1 | site-specific integrase | - |
| NFK94_RS22290 (91904) | 91904..93238 | - | 1335 | WP_024132209.1 | hypothetical protein | VF |
| NFK94_RS22295 (93238) | 93238..93894 | - | 657 | WP_001193553.1 | hypothetical protein | VF |
| NFK94_RS22300 (93879) | 93879..94439 | - | 561 | WP_000014116.1 | hypothetical protein | VF |
| NFK94_RS22305 (94449) | 94449..95063 | - | 615 | WP_000959785.1 | hypothetical protein | VF |
| NFK94_RS22310 (95081) | 95081..96178 | - | 1098 | WP_001208805.1 | hypothetical protein | VF |
| NFK94_RS22315 (96191) | 96191..97585 | - | 1395 | WP_001292897.1 | hypothetical protein | VF |
| NFK94_RS22320 (97755) | 97755..98207 | - | 453 | WP_001247334.1 | hypothetical protein | VF |
| NFK94_RS22325 (98194) | 98194..99489 | - | 1296 | WP_000752772.1 | hypothetical protein | VF |
| NFK94_RS22330 (99482) | 99482..101164 | - | 1683 | WP_000748143.1 | hypothetical protein | VF |
| NFK94_RS22335 (101178) | 101178..101615 | - | 438 | WP_000539807.1 | hypothetical protein | VF |
| NFK94_RS22340 (101615) | 101615..102682 | - | 1068 | WP_001302629.1 | hypothetical protein | VF |
| NFK94_RS22345 (103306) | 103306..103602 | - | 297 | WP_000494779.1 | hypothetical protein | - |
| NFK94_RS22350 (103778) | 103778..104032 | - | 255 | WP_001136187.1 | PilI type IV pilus biogenesis protein | - |
| NFK94_RS22355 (104194) | 104194..104745 | - | 552 | WP_000744644.1 | hypothetical protein | - |
| NFK94_RS22360 (104918) | 104918..105601 | - | 684 | WP_000213859.1 | conjugal transfer protein TraC | - |
| NFK94_RS22365 (105855) | 105855..106388 | - | 534 | WP_001372168.1 | transcription termination/antitermination NusG family protein | - |
| NFK94_RS22370 (106830) | 106830..107117 | - | 288 | WP_000074849.1 | conjugal transfer protein TraA | - |
| NFK94_RS22375 (107035) | 107035..107313 | - | 279 | WP_219065241.1 | ash family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|