MGE detailed information
MGE type: Genomic_island MGE length: 12086 bp
Accession: NZ_CP098834 Location: 2443041..2455126 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain GD19PS1 Replicon: chromosome
Accession: NZ_CP098834 Location: 2443041..2455126 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain GD19PS1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NFH28_RS12010 (2438962) | 2438962..2440164 | - | 1203 | WP_000347159.1 | MalY/PatB family protein | - |
| NFH28_RS12015 (2440177) | 2440177..2441628 | - | 1452 | WP_001276616.1 | Na+/H+ antiporter NhaC | - |
| NFH28_RS12020 (2441772) | 2441772..2442779 | - | 1008 | WP_000201080.1 | LacI family DNA-binding transcriptional regulator | - |
| NFH28_RS12025 (2443038) | 2443038..2444504 | + | 1467 | WP_000987828.1 | hypothetical protein | - |
| NFH28_RS12030 (2445312) | 2445312..2446026 | + | 715 | Protein_2360 | helix-turn-helix domain-containing protein | - |
| NFH28_RS12035 (2446082) | 2446082..2446990 | - | 909 | WP_010989018.1 | hypothetical protein | - |
| NFH28_RS12040 (2447133) | 2447133..2447465 | - | 333 | WP_000253154.1 | DUF1493 family protein | - |
| NFH28_RS12045 (2447455) | 2447455..2447670 | - | 216 | WP_000206207.1 | hypothetical protein | - |
| NFH28_RS12050 (2447822) | 2447822..2448070 | + | 249 | WP_000885424.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| NFH28_RS12055 (2448060) | 2448060..2448344 | + | 285 | WP_000221343.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| NFH28_RS12060 (2448515) | 2448515..2448904 | + | 390 | WP_000194089.1 | RidA family protein | - |
| NFH28_RS12065 (2448956) | 2448956..2450035 | - | 1080 | WP_000954688.1 | S-adenosylmethionine:tRNA ribosyltransferase-isomerase | - |
| NFH28_RS12070 (2450228) | 2450228..2450716 | - | 489 | WP_001293638.1 | MarR family winged helix-turn-helix transcriptional regulator | - |
| NFH28_RS12075 (2450761) | 2450761..2452269 | + | 1509 | WP_000199411.1 | FAD-dependent oxidoreductase | - |
| NFH28_RS12080 (2452259) | 2452259..2453500 | + | 1242 | WP_001095738.1 | MFS transporter | - |
| NFH28_RS12085 (2453570) | 2453570..2455126 | + | 1557 | WP_000476912.1 | PhoPQ-activated pathogenicity-related family protein | - |
| NFH28_RS12090 (2455303) | 2455303..2456589 | + | 1287 | WP_000824240.1 | MFS transporter | - |
| NFH28_RS12095 (2456564) | 2456564..2457589 | + | 1026 | WP_000864924.1 | zinc-binding alcohol dehydrogenase family protein | - |
| NFH28_RS12100 (2457648) | 2457648..2458439 | - | 792 | WP_001518759.1 | FadR/GntR family transcriptional regulator | - |
| NFH28_RS12105 (2458485) | 2458485..2459576 | - | 1092 | WP_000976498.1 | linear amide C-N hydrolase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Genomic island | TA297233 | UFRD01000002 | 1156436..1168519 | 0 |