MGE detailed information
MGE type: Genomic_island MGE length: 10390 bp
Accession: NZ_CP098831 Location: 979387..989776 Organism: Salmonella enterica subsp. enterica serovar Indiana strain YZ20MCS14 Replicon: chromosome
Accession: NZ_CP098831 Location: 979387..989776 Organism: Salmonella enterica subsp. enterica serovar Indiana strain YZ20MCS14 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NFH10_RS04650 (975901) | 975901..976299 | + | 399 | Protein_912 | cytoplasmic protein | - |
| NFH10_RS04655 (976885) | 976885..977553 | + | 669 | WP_000445914.1 | hypothetical protein | - |
| NFH10_RS04660 (977580) | 977580..978074 | + | 495 | WP_023227564.1 | hypothetical protein | - |
| NFH10_RS04665 (978319) | 978319..978975 | - | 657 | WP_000420452.1 | protein-serine/threonine phosphatase | - |
| NFH10_RS04670 (979310) | 979310..979527 | + | 218 | Protein_916 | IS5 family transposase ISEcl3 | Transposase |
| NFH10_RS04675 (979600) | 979600..980127 | - | 528 | WP_023227563.1 | GNAT family N-acetyltransferase | Toxin Detail |
| NFH10_RS04680 (980124) | 980124..980414 | - | 291 | WP_072162154.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| NFH10_RS04685 (980684) | 980684..980862 | - | 179 | Protein_919 | IS3 family transposase | - |
| NFH10_RS04690 (981103) | 981103..981429 | + | 327 | WP_000393302.1 | hypothetical protein | - |
| NFH10_RS04695 (981702) | 981702..982049 | - | 348 | WP_001669174.1 | DUF1493 family protein | - |
| NFH10_RS04700 (982034) | 982034..982483 | - | 450 | WP_000381610.1 | membrane protein | - |
| NFH10_RS04705 (982914) | 982914..983357 | - | 444 | WP_000715096.1 | Type 3 secretion system pilotin | VF |
| NFH10_RS04710 (983813) | 983813..984463 | + | 651 | WP_001674874.1 | Invasion protein InvF | VF |
| NFH10_RS04715 (984460) | 984460..986148 | + | 1689 | WP_000848113.1 | Type 3 secretion system secretin | VF |
| NFH10_RS04720 (986145) | 986145..987263 | + | 1119 | WP_000612171.1 | Protein MxiC | VF |
| NFH10_RS04725 (987288) | 987288..989345 | + | 2058 | WP_000927219.1 | Invasion protein InvA | VF |
| NFH10_RS04730 (989369) | 989369..989776 | + | 408 | WP_001164066.1 | Surface presentation of antigens protein SpaK | VF |
| NFH10_RS04735 (989773) | 989773..991068 | + | 1296 | WP_000856766.1 | SctN family type III secretion system ATPase InvC | - |
| NFH10_RS04740 (991046) | 991046..991489 | + | 444 | WP_000555884.1 | SPI-1 type III secretion system protein SpaM | - |
| NFH10_RS04745 (991489) | 991489..992499 | + | 1011 | WP_001619772.1 | SPI-1 type III secretion system protein SpaN | - |
| NFH10_RS04750 (992499) | 992499..993410 | + | 912 | WP_000058736.1 | SPI-1 type III secretion system protein SpaO | - |
| NFH10_RS04755 (993400) | 993400..994074 | + | 675 | WP_000526016.1 | SPI-1 type III secretion system export apparatus protein SpaP | - |
| NFH10_RS04760 (994100) | 994100..994360 | + | 261 | WP_000342503.1 | SPI-1 type III secretion system export apparatus protein SpaQ | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Genomic island | TA10052 | UFRD01000002 | 4599654..4610080 | 0.006 |