MGE detailed information
MGE type: Prophage MGE length: 46863 bp
Accession: NZ_CP098741 Location: 189953..236815 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain HJL222 Replicon: chromosome
Accession: NZ_CP098741 Location: 189953..236815 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain HJL222 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NCG87_RS00970 () | 185389..186762 | + | 1374 | WP_000416127.1 | MFS transporter | - |
| NCG87_RS00975 () | 186810..187691 | - | 882 | WP_000984498.1 | protease HtpX | - |
| NCG87_RS00980 () | 187885..189933 | - | 2049 | WP_001091237.1 | carboxy terminal-processing peptidase | - |
| NCG87_RS00985 () | 189953..190639 | - | 687 | WP_000431401.1 | RNA chaperone ProQ | - |
| NCG87_RS00990 () | 190737..191234 | - | 498 | WP_001518229.1 | GAF domain-containing protein | - |
| NCG87_RS00995 () | 191363..192646 | + | 1284 | WP_001207294.1 | membrane integrity lipid transport subunit YebS | - |
| NCG87_RS01000 () | 192615..195248 | + | 2634 | WP_001535256.1 | Intermembrane transport protein YebT | VF |
| NCG87_RS01005 () | 195326..196765 | + | 1440 | WP_001542138.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| NCG87_RS01010 () | 196883..197119 | + | 237 | WP_024131108.1 | YebV family protein | - |
| NCG87_RS01015 () | 197230..197421 | + | 192 | WP_000457836.1 | YebW family protein | - |
| NCG87_RS01020 () | 197440..198090 | - | 651 | WP_000986176.1 | protein-serine/threonine phosphatase | - |
| NCG87_RS01025 () | 198314..198478 | - | 165 | WP_001134856.1 | membrane protein | - |
| NCG87_RS01030 () | 198763..199485 | - | 723 | WP_000182072.1 | Guanine nucleotide exchange factor sopE2 | VF |
| NCG87_RS01035 () | 200169..200564 | + | 396 | WP_000422882.1 | DUF1398 domain-containing protein | - |
| NCG87_RS01040 () | 200894..201370 | + | 477 | WP_000030934.1 | hypothetical protein | - |
| NCG87_RS01045 () | 201758..202177 | - | 420 | WP_000354408.1 | GNAT family N-acetyltransferase | - |
| NCG87_RS01050 () | 202547..202816 | + | 270 | WP_001752421.1 | hypothetical protein | - |
| NCG87_RS01055 () | 202982..203122 | + | 141 | WP_001617922.1 | hypothetical protein | - |
| NCG87_RS01060 () | 203268..204462 | - | 1195 | Protein_204 | IS256 family transposase IS285 | Transposase |
| NCG87_RS01065 () | 204532..204954 | + | 423 | Protein_205 | hypothetical protein ; Integrase | Integrase |
| NCG87_RS01070 () | 206258..207172 | + | 915 | WP_001233446.1 | DMT family transporter | - |
| NCG87_RS01075 () | 207305..207463 | + | 159 | WP_000480735.1 | DUF5993 family protein | - |
| NCG87_RS01080 () | 207473..208087 | + | 615 | WP_000848069.1 | disulfide bond formation protein B | - |
| NCG87_RS01085 () | 208414..208581 | - | 168 | WP_001751917.1 | helix-turn-helix domain-containing protein | - |
| NCG87_RS24020 () | 208575..208721 | + | 147 | WP_001520350.1 | hypothetical protein | - |
| NCG87_RS01090 () | 209235..209360 | - | 126 | WP_000457876.1 | hypothetical protein | - |
| NCG87_RS01095 () | 209360..209540 | + | 181 | Protein_212 | IS3 family transposase | - |
| NCG87_RS01100 () | 209930..210130 | + | 201 | WP_010989029.1 | PagK family vesicle-borne virulence factor | - |
| NCG87_RS01105 () | 210227..210697 | - | 471 | Protein_214 | tail fiber assembly protein | - |
| NCG87_RS01110 () | 210707..211051 | - | 345 | Protein_215 | macro domain-containing protein | - |
| NCG87_RS01115 () | 211266..211526 | - | 261 | Protein_216 | DUF1441 family protein | - |
| NCG87_RS01120 () | 211581..211769 | + | 189 | WP_001521334.1 | hypothetical protein | - |
| NCG87_RS01125 () | 211834..212001 | + | 168 | WP_000789530.1 | lytic enzyme | - |
| NCG87_RS01130 () | 212258..212791 | - | 534 | WP_001050882.1 | DUF2514 domain-containing protein | - |
| NCG87_RS01135 () | 212845..213036 | - | 192 | Protein_220 | glycoside hydrolase family 19 protein | - |
| NCG87_RS01140 () | 213025..213486 | + | 462 | Protein_221 | DNA breaking-rejoining protein | - |
| NCG87_RS01145 () | 213750..214673 | + | 924 | Protein_222 | hypothetical protein ; Integrase | Integrase |
| - | 214802..214947 | + | 146 | - | - | Antitoxin Detail |
| - | 214804..214907 | - | 104 | - | - | Toxin Detail |
| NCG87_RS01150 () | 215047..215400 | - | 354 | WP_000722368.1 | YebY family protein | - |
| NCG87_RS01155 () | 215417..216292 | - | 876 | WP_000979702.1 | copper homeostasis membrane protein CopD | - |
| NCG87_RS01160 () | 216293..216667 | - | 375 | WP_000168393.1 | CopC domain-containing protein YobA | - |
| NCG87_RS01165 () | 216805..217035 | + | 231 | WP_000856224.1 | DNA polymerase III subunit theta | - |
| NCG87_RS01170 () | 217143..217799 | + | 657 | WP_000100258.1 | carbon-nitrogen hydrolase family protein | - |
| NCG87_RS01175 () | 217823..218521 | + | 699 | WP_000944282.1 | exodeoxyribonuclease X | - |
| NCG87_RS01180 () | 218556..220607 | - | 2052 | WP_000936999.1 | oligopeptidase B | - |
| NCG87_RS01185 () | 220820..221479 | - | 660 | WP_000024706.1 | tellurite resistance TerB family protein | - |
| NCG87_RS01190 () | 221573..221926 | - | 354 | WP_001042119.1 | protein YebF | - |
| NCG87_RS01195 () | 221994..222284 | - | 291 | WP_000257723.1 | DNA damage-inducible protein YebG | - |
| NCG87_RS01200 () | 222415..223593 | + | 1179 | WP_000173431.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| NCG87_RS01205 () | 223693..224334 | - | 642 | WP_000800497.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| NCG87_RS01210 () | 224372..226183 | - | 1812 | WP_001069113.1 | phosphogluconate dehydratase | - |
| NCG87_RS01215 () | 226418..227893 | - | 1476 | WP_000301711.1 | glucose-6-phosphate dehydrogenase | - |
| NCG87_RS01220 () | 228235..229104 | + | 870 | WP_001056720.1 | MurR/RpiR family transcriptional regulator | - |
| NCG87_RS01225 () | 229228..230670 | + | 1443 | WP_000091156.1 | pyruvate kinase | - |
| NCG87_RS01230 () | 230743..231714 | - | 972 | WP_000448401.1 | Lipid A biosynthesis myristoyltransferase | VF |
| NCG87_RS01235 () | 231831..233150 | - | 1320 | WP_001184028.1 | murein DD-endopeptidase MepM | - |
| NCG87_RS01240 () | 233166..234110 | - | 945 | WP_251103514.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| NCG87_RS01245 () | 234189..234944 | + | 756 | WP_000203014.1 | Zinc import ATP-binding protein ZnuC | VF |
| NCG87_RS01250 () | 234941..235726 | + | 786 | WP_000571508.1 | High-affinity zinc uptake system membrane protein ZnuB | VF |
| NCG87_RS01255 () | 235805..236815 | - | 1011 | WP_000568508.1 | Holliday junction ATP-dependent DNA helicase RuvB | VF |
| NCG87_RS01260 () | 236824..237435 | - | 612 | WP_000580335.1 | Holliday junction branch migration protein RuvA | - |
| NCG87_RS01265 () | 237855..238751 | + | 897 | WP_010989032.1 | DUF4034 domain-containing protein | - |
| NCG87_RS01270 () | 239378..239977 | + | 600 | WP_000716748.1 | YebB family permuted papain-like enzyme | - |
| NCG87_RS01275 () | 239979..240500 | - | 522 | WP_000022509.1 | crossover junction endodeoxyribonuclease RuvC | - |
| NCG87_RS01280 () | 240537..241277 | - | 741 | WP_000907242.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| NCG87_RS01285 () | 241307..241759 | - | 453 | WP_000653693.1 | dihydroneopterin triphosphate diphosphatase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 | Prophage | TA25947 | NC_016810 | 1910986..1947632 | 0.006 |