MGE detailed information
MGE type: IS/Tn MGE length: 459 bp
Accession: NZ_CP098741 Location: 1408009..1408467 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain HJL222 Replicon: chromosome
Accession: NZ_CP098741 Location: 1408009..1408467 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain HJL222 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NCG87_RS06850 (1404811) | 1404811..1405395 | - | 585 | WP_001244638.1 | fimbrial protein | - |
| NCG87_RS06855 (1406114) | 1406114..1406746 | - | 633 | WP_000835265.1 | YfdX family protein | - |
| NCG87_RS06860 (1406793) | 1406793..1407329 | - | 537 | WP_001038506.1 | STM3031 family outer membrane protein | - |
| NCG87_RS06865 (1408009) | 1408009..1408467 | - | 459 | WP_000502119.1 | IS200-IS605 family transposase IS200F | Transposase |
| NCG87_RS06870 (1408847) | 1408847..1409245 | - | 399 | WP_000911336.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| NCG87_RS06875 (1409245) | 1409245..1409472 | - | 228 | WP_000557549.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| NCG87_RS06880 (1409649) | 1409649..1409900 | + | 252 | WP_001540858.1 | hypothetical protein | - |
| NCG87_RS06885 (1410175) | 1410175..1410981 | + | 807 | WP_010989071.1 | DUF1460 domain-containing protein | - |
| NCG87_RS06895 (1411266) | 1411266..1412024 | - | 759 | WP_000244329.1 | amidase activator ActS | - |
| NCG87_RS06900 (1412289) | 1412289..1412834 | + | 546 | WP_000133994.1 | isopentenyl-diphosphate Delta-isomerase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 | IS/Tn | TA439 | NC_003197 | 3194324..3194782 | 0 |