MGE detailed information
MGE type: Prophage MGE length: 18258 bp
Accession: NZ_CP098719 Location: 598180..616437 Organism: Yersinia ruckeri strain NVI-11267 Replicon: chromosome
Accession: NZ_CP098719 Location: 598180..616437 Organism: Yersinia ruckeri strain NVI-11267 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ND445_RS02705 (ND445_02705) | 593266..593715 | - | 450 | WP_004720451.1 | DNA polymerase III subunit chi | - |
| ND445_RS02710 (ND445_02710) | 593838..595349 | - | 1512 | WP_004720452.1 | leucyl aminopeptidase | - |
| ND445_RS02715 (ND445_02715) | 595629..596723 | + | 1095 | WP_004720454.1 | LPS export ABC transporter permease LptF | - |
| ND445_RS02720 (ND445_02720) | 596723..597793 | + | 1071 | WP_038241732.1 | LPS export ABC transporter permease LptG | - |
| ND445_RS02730 (ND445_02730) | 598180..599103 | + | 924 | Protein_527 | Prophage integrase IntA ; Integrase | Integrase |
| ND445_RS02740 (ND445_02740) | 600519..601211 | - | 693 | WP_096823268.1 | hypothetical protein | - |
| ND445_RS02745 (ND445_02745) | 601557..603686 | + | 2130 | WP_096823269.1 | helix-turn-helix transcriptional regulator | - |
| ND445_RS02750 (ND445_02750) | 604851..605795 | - | 945 | WP_038275265.1 | hypothetical protein | - |
| ND445_RS02755 (ND445_02755) | 606310..607569 | + | 1260 | Protein_532 | integrase arm-type DNA-binding domain-containing protein | - |
| ND445_RS02760 (ND445_02760) | 607743..607997 | + | 255 | WP_005175264.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| ND445_RS02765 (ND445_02765) | 607987..608277 | + | 291 | WP_071666901.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| ND445_RS02770 (ND445_02770) | 608541..608930 | + | 390 | WP_096823270.1 | restriction endonuclease subunit S | - |
| ND445_RS02775 (ND445_02775) | 609054..609629 | + | 576 | WP_071706520.1 | DarT ssDNA thymidine ADP-ribosyltransferase family protein | - |
| ND445_RS02780 (ND445_02780) | 609632..610288 | + | 657 | WP_096823271.1 | DUF4433 domain-containing protein | Toxin Detail |
| ND445_RS02785 (ND445_02785) | 610285..611352 | + | 1068 | WP_096823272.1 | macro domain-containing protein | Antitoxin Detail |
| ND445_RS02790 (ND445_02790) | 611373..611639 | + | 267 | Protein_539 | hypothetical protein | - |
| ND445_RS02795 (ND445_02795) | 611714..611848 | + | 135 | Protein_540 | IS3 family transposase ISKpn37 | Transposase |
| ND445_RS02800 (ND445_02800) | 611851..612348 | + | 498 | Protein_541 | IS30 family transposase ISYkr1 | Transposase |
| ND445_RS02805 (ND445_02805) | 612354..613047 | + | 694 | Protein_542 | IS3 family transposase | - |
| ND445_RS02810 (ND445_02810) | 613357..614268 | - | 912 | WP_096823274.1 | EamA family transporter | - |
| ND445_RS02815 (ND445_02815) | 614425..615102 | + | 678 | WP_096823275.1 | hypothetical protein | - |
| ND445_RS02820 (ND445_02820) | 615270..616437 | - | 1168 | Protein_545 | IS3 family transposase ISKpn37 | Transposase |
| ND445_RS02825 (ND445_02825) | 616520..616666 | - | 147 | Protein_546 | helix-turn-helix domain-containing protein | - |
| ND445_RS02830 (ND445_02830) | 616773..616863 | + | 91 | Protein_547 | restriction endonuclease subunit M | - |
| ND445_RS02835 (ND445_02835) | 616938..617333 | + | 396 | WP_038245317.1 | DUF6088 family protein | - |
| ND445_RS02840 (ND445_02840) | 617326..618275 | + | 950 | Protein_549 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | - |
| ND445_RS02845 (ND445_02845) | 618645..618770 | + | 126 | Protein_550 | antirestriction protein | - |
| ND445_RS02850 (ND445_02850) | 618796..618969 | + | 174 | Protein_551 | type IV toxin-antitoxin system YeeU family antitoxin | - |
| ND445_RS02855 (ND445_02855) | 619571..620725 | + | 1155 | WP_038245380.1 | N-acetylneuraminate epimerase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|