MGE detailed information
MGE type: IS/Tn MGE length: 459 bp
Accession: NZ_CP098438 Location: 891992..892450 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain ATOMSal-L6 Replicon: chromosome
Accession: NZ_CP098438 Location: 891992..892450 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain ATOMSal-L6 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| M9193_RS04265 (887625) | 887625..888170 | - | 546 | WP_000133994.1 | isopentenyl-diphosphate Delta-isomerase | - |
| M9193_RS04270 (888435) | 888435..889193 | + | 759 | WP_000244329.1 | amidase activator ActS | - |
| M9193_RS04280 (889478) | 889478..890284 | - | 807 | WP_010989071.1 | DUF1460 domain-containing protein | - |
| M9193_RS04285 (890559) | 890559..890810 | - | 252 | WP_001540858.1 | hypothetical protein | - |
| M9193_RS04290 (890987) | 890987..891214 | + | 228 | WP_000557549.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| M9193_RS04295 (891214) | 891214..891612 | + | 399 | WP_000911336.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| M9193_RS04300 (891992) | 891992..892450 | + | 459 | WP_000502119.1 | IS200-IS605 family transposase IS200F | Transposase |
| M9193_RS04305 (893130) | 893130..893666 | + | 537 | WP_001038506.1 | STM3031 family outer membrane protein | - |
| M9193_RS04310 (893713) | 893713..894345 | + | 633 | WP_000835265.1 | YfdX family protein | - |
| M9193_RS04315 (895064) | 895064..895648 | + | 585 | WP_001244638.1 | fimbrial protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 | IS/Tn | TA439 | NC_003197 | 3194324..3194782 | 0 |