MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 57370 bp
Accession: NZ_CP098225 Location: 1..57370 Organism: Escherichia coli strain Z0117EC0005 Replicon: plasmid pZ0117EC0005-2
Accession: NZ_CP098225 Location: 1..57370 Organism: Escherichia coli strain Z0117EC0005 Replicon: plasmid pZ0117EC0005-2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NBY12_RS23790 () | 486..872 | + | 387 | Protein_1 | DUF2726 domain-containing protein | - |
| NBY12_RS23795 () | 1027..1500 | + | 474 | WP_016240489.1 | hypothetical protein | - |
| - () | 1643..1702 | - | 60 | NuclAT_1 | - | - |
| - () | 1643..1702 | - | 60 | NuclAT_1 | - | - |
| - () | 1643..1702 | - | 60 | NuclAT_1 | - | - |
| - () | 1643..1702 | - | 60 | NuclAT_1 | - | - |
| NBY12_RS23800 () | 1747..1896 | + | 150 | WP_001312851.1 | Hok/Gef family protein | - |
| NBY12_RS23805 () | 2181..2429 | + | 249 | WP_000083839.1 | replication regulatory protein RepA | - |
| NBY12_RS23810 () | 2674..2748 | + | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| NBY12_RS23815 () | 2741..3598 | + | 858 | WP_016240488.1 | incFII family plasmid replication initiator RepA | - |
| NBY12_RS23820 () | 4512..4781 | + | 270 | WP_012881119.1 | type II toxin-antitoxin system antitoxin YacA | Antitoxin Detail |
| NBY12_RS23825 () | 4781..5059 | + | 279 | WP_244449344.1 | type II toxin-antitoxin system toxin YacB | Toxin Detail |
| NBY12_RS23830 () | 5105..5953 | + | 849 | WP_012881117.1 | 3'-5' exonuclease | - |
| NBY12_RS23835 () | 6070..6552 | + | 483 | WP_001311056.1 | hypothetical protein | - |
| NBY12_RS23840 () | 6587..7609 | - | 1023 | Protein_11 | IS5 family transposase IS903B | Transposase |
| NBY12_RS23845 () | 7658..8065 | - | 408 | Protein_12 | IS5 family transposase IS903B | Transposase |
| NBY12_RS23850 () | 8145..9020 | - | 876 | WP_001617865.1 | Beta-lactamase CTX-M-97 | ARG |
| NBY12_RS23855 () | 9270..10532 | - | 1263 | WP_000608644.1 | IS1380 family transposase ISEcp1 | Transposase |
| NBY12_RS23860 () | 10876..12063 | - | 1188 | WP_025999368.1 | MFS transporter | - |
| NBY12_RS23865 () | 12120..12881 | - | 762 | WP_000020504.1 | Fe(3+) dicitrate transport ATP-binding protein FecE | VF |
| NBY12_RS23870 () | 12881..13918 | - | 1038 | WP_001545318.1 | Hemin transport system permease protein HmuU | VF |
| NBY12_RS23875 () | 13918..14916 | - | 999 | WP_012881113.1 | ABC transporter substrate-binding protein | - |
| NBY12_RS23880 () | 15066..15224 | - | 159 | Protein_19 | integrase core domain-containing protein | - |
| NBY12_RS23885 () | 15267..15509 | - | 243 | Protein_20 | recombinase family protein | - |
| NBY12_RS23890 () | 15767..16117 | - | 351 | WP_001414994.1 | plasmid partitioning/stability family protein | - |
| NBY12_RS23895 () | 16120..17082 | - | 963 | WP_000959878.1 | plasmid segregation protein ParM | - |
| NBY12_RS23900 () | 17229..17522 | + | 294 | WP_032142565.1 | hypothetical protein | - |
| NBY12_RS23905 () | 17598..18281 | + | 684 | WP_012881149.1 | DNA methylase | - |
| NBY12_RS23910 () | 18282..18503 | + | 222 | WP_012881148.1 | hypothetical protein | - |
| NBY12_RS23915 () | 18517..18951 | + | 435 | WP_012917669.1 | DUF1380 family protein | - |
| NBY12_RS23920 () | 19002..19778 | + | 777 | WP_025999342.1 | hypothetical protein | - |
| NBY12_RS23925 () | 20194..20619 | + | 426 | WP_001198895.1 | antirestriction protein | - |
| NBY12_RS23930 () | 20666..21088 | + | 423 | WP_012917670.1 | DUF1380 family protein | - |
| NBY12_RS23935 () | 21085..21276 | + | 192 | WP_001027516.1 | hypothetical protein | - |
| NBY12_RS23940 () | 22313..22543 | + | 231 | WP_000155844.1 | hypothetical protein | - |
| NBY12_RS23945 () | 22595..23956 | + | 1362 | WP_012917672.1 | DUF3560 domain-containing protein | - |
| NBY12_RS23950 () | 24003..24566 | + | 564 | WP_012881140.1 | class I SAM-dependent methyltransferase | - |
| NBY12_RS23955 () | 24566..24790 | + | 225 | WP_072061061.1 | hypothetical protein | - |
| NBY12_RS23960 () | 24718..24960 | + | 243 | WP_001365577.1 | hypothetical protein | - |
| NBY12_RS23965 () | 25433..25954 | + | 522 | WP_012881138.1 | single-stranded DNA-binding protein | - |
| NBY12_RS23970 () | 26010..26243 | + | 234 | WP_000005971.1 | DUF905 domain-containing protein | - |
| NBY12_RS23975 () | 26307..28265 | + | 1959 | WP_233108850.1 | ParB/RepB/Spo0J family partition protein | - |
| NBY12_RS23980 () | 28320..28754 | + | 435 | WP_021572430.1 | conjugation system SOS inhibitor PsiB | - |
| NBY12_RS23985 () | 28751..29470 | + | 720 | WP_100774605.1 | plasmid SOS inhibition protein A | - |
| NBY12_RS23990 () | 29467..29781 | + | 315 | WP_000872086.1 | hypothetical protein | - |
| - () | 29730..29937 | + | 208 | NuclAT_0 | - | Antitoxin Detail |
| - () | 29730..29937 | + | 208 | NuclAT_0 | - | Antitoxin Detail |
| - () | 29730..29937 | + | 208 | NuclAT_0 | - | Antitoxin Detail |
| - () | 29730..29937 | + | 208 | NuclAT_0 | - | Antitoxin Detail |
| - | 29733..29937 | - | 205 | - | - | Antitoxin Detail |
| NBY12_RS23995 () | 29971..30084 | + | 114 | Protein_42 | DUF5431 family protein | - |
| NBY12_RS24000 () | 30029..30151 | + | 123 | WP_223412041.1 | Hok/Gef family protein | Toxin Detail |
| NBY12_RS24005 () | 30565..31068 | + | 504 | Protein_44 | IS66-like element accessory protein TnpA | - |
| NBY12_RS24010 () | 31336..31659 | - | 324 | WP_025733244.1 | 60 kDa chaperonin | VF |
| NBY12_RS24015 () | 31620..32069 | - | 450 | WP_013362817.1 | hypothetical protein | - |
| NBY12_RS24020 () | 32699..33436 | - | 738 | WP_250777852.1 | rRNA adenine N-6-methyltransferase | ARG |
| NBY12_RS24025 () | 33562..33657 | - | 96 | WP_013362819.1 | 23S rRNA methyltransferase attenuation leader peptide | - |
| NBY12_RS24030 () | 33792..34496 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| NBY12_RS24035 () | 34549..34785 | - | 237 | Protein_50 | DUF3330 domain-containing protein | - |
| NBY12_RS24040 () | 34988..36001 | - | 1014 | WP_000845048.1 | IS91 family transposase ISAzo26 | Transposase |
| NBY12_RS24045 () | 36159..36632 | + | 474 | WP_001389366.1 | trimethoprim-resistant dihydrofolate reductase DfrA17 | - |
| NBY12_RS24050 () | 36763..37551 | + | 789 | WP_000503573.1 | Streptomycin 3''-adenylyltransferase | ARG |
| NBY12_RS24055 () | 37757..38104 | + | 348 | WP_000679427.1 | Multidrug transporter EmrE | ARG |
| NBY12_RS24060 () | 38098..38937 | + | 840 | WP_000259031.1 | Dihydropteroate synthase | ARG |
| NBY12_RS24065 () | 39065..39337 | + | 273 | WP_004883563.1 | hypothetical protein | - |
| NBY12_RS24070 () | 39519..40523 | - | 1005 | WP_000427623.1 | IS110 family transposase IS4321R | Transposase |
| NBY12_RS24075 () | 40751..41956 | + | 1206 | WP_000184001.1 | chromate efflux transporter | - |
| NBY12_RS24080 () | 41967..42272 | + | 306 | WP_000130000.1 | Transcriptional regulator | Relaxase |
| NBY12_RS24085 () | 42316..42381 | + | 66 | Protein_60 | EAL domain-containing protein | - |
| NBY12_RS24090 () | 42499..43263 | + | 765 | WP_001389365.1 | IS6 family transposase IS6100 | Transposase |
| NBY12_RS24095 () | 43756..44340 | - | 585 | WP_001137892.1 | macrolide-binding transcriptional repressor MphR(A) | - |
| NBY12_RS24100 () | 44340..45578 | - | 1239 | WP_000004159.1 | macrolide resistance MFS transporter Mrx(A) | - |
| NBY12_RS24105 () | 45575..46480 | - | 906 | WP_000219391.1 | hypothetical protein | ARG |
| NBY12_RS24110 () | 46602..47306 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| NBY12_RS24115 () | 47343..48470 | - | 1128 | WP_060579135.1 | DUF3883 domain-containing protein | - |
| NBY12_RS24120 () | 48521..48748 | - | 228 | WP_000248278.1 | hypothetical protein | - |
| NBY12_RS24125 () | 48772..48963 | + | 192 | WP_000951934.1 | hypothetical protein | - |
| NBY12_RS24130 () | 49445..49987 | - | 543 | WP_000587837.1 | AAA family ATPase | - |
| NBY12_RS24135 () | 50000..50860 | - | 861 | WP_000557454.1 | SPbeta prophage-derived aminoglycoside N(3')-acetyltransferase-like protein YokD | ARG |
| NBY12_RS24140 () | 51003..51965 | + | 963 | Protein_71 | IS4 family transposase IS10R | Transposase |
| NBY12_RS24145 () | 52075..52980 | + | 906 | Protein_72 | IS4 family transposase IS10R | Transposase |
| NBY12_RS24150 () | 53029..53733 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| NBY12_RS24155 () | 53789..54022 | + | 234 | Protein_74 | helix-turn-helix domain-containing protein | - |
| NBY12_RS24160 () | 54205..55065 | + | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| NBY12_RS24165 () | 55215..55313 | - | 99 | Protein_76 | IS1 family transposase | - |
| NBY12_RS24170 () | 55342..56652 | - | 1311 | WP_001262765.1 | DUF262 domain-containing protein | - |
| NBY12_RS24175 () | 56937..57032 | - | 96 | Protein_78 | mRNA interferase PemK | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|