MGE detailed information
MGE type: Genomic_island MGE length: 39910 bp
Accession: NZ_CP098211 Location: 4217609..4257518 Organism: Escherichia coli strain Z0117EC0040 Replicon: chromosome
Accession: NZ_CP098211 Location: 4217609..4257518 Organism: Escherichia coli strain Z0117EC0040 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NBY16_RS20310 (4214135) | 4214135..4214860 | - | 726 | WP_048963344.1 | type 1 fimbria chaperone FimC | - |
| NBY16_RS20315 (4214897) | 4214897..4215436 | - | 540 | WP_000824105.1 | fimbrial protein | - |
| NBY16_RS20320 (4215501) | 4215501..4216055 | - | 555 | WP_000695589.1 | type 1 fimbrial major subunit FimA | - |
| NBY16_RS20325 (4216536) | 4216536..4217132 | - | 597 | WP_000044711.1 | type 1 fimbria switch DNA invertase FimE | - |
| NBY16_RS20330 (4217609) | 4217609..4218211 | - | 603 | WP_000790583.1 | ISKra4 family transposase ISCep1 | VF |
| NBY16_RS20335 (4219665) | 4219665..4220381 | + | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| NBY16_RS20340 (4220401) | 4220401..4221507 | + | 1107 | WP_001299704.1 | N-acetylneuraminate epimerase | - |
| NBY16_RS20345 (4221572) | 4221572..4222552 | + | 981 | WP_048963137.1 | sialate O-acetylesterase | - |
| NBY16_RS20350 (4222560) | 4222560..4223210 | - | 651 | WP_048963135.1 | HNH endonuclease | - |
| NBY16_RS20355 (4223347) | 4223347..4223490 | + | 144 | Protein_3995 | HNH endonuclease | - |
| NBY16_RS20360 (4223589) | 4223589..4223774 | + | 186 | WP_000066585.1 | hypothetical protein | - |
| NBY16_RS20365 (4223812) | 4223812..4224759 | - | 948 | WP_048963133.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | Toxin Detail |
| NBY16_RS20370 (4224752) | 4224752..4225147 | - | 396 | WP_000152739.1 | DUF6088 family protein | Antitoxin Detail |
| NBY16_RS20375 (4225217) | 4225217..4226050 | - | 834 | WP_048963131.1 | DUF4942 domain-containing protein | - |
| NBY16_RS20380 (4226358) | 4226358..4227946 | + | 1589 | Protein_4000 | type I restriction-modification system subunit M | - |
| NBY16_RS20385 (4227943) | 4227943..4229133 | + | 1191 | WP_250838342.1 | restriction endonuclease subunit S | - |
| NBY16_RS20390 (4229255) | 4229255..4232371 | + | 3117 | WP_048963609.1 | HsdR family type I site-specific deoxyribonuclease | - |
| NBY16_RS20395 (4232727) | 4232727..4233509 | - | 783 | WP_244470603.1 | helix-turn-helix transcriptional regulator | - |
| NBY16_RS20400 (4233639) | 4233639..4233914 | - | 276 | WP_023220446.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| NBY16_RS20405 (4233918) | 4233918..4234166 | - | 249 | WP_023220445.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| NBY16_RS20410 (4234242) | 4234242..4235084 | - | 843 | WP_048963608.1 | DUF4942 domain-containing protein | - |
| NBY16_RS20415 (4235197) | 4235197..4235547 | - | 351 | WP_053087800.1 | DUF5983 family protein | - |
| NBY16_RS20420 (4235574) | 4235574..4235750 | - | 177 | Protein_4008 | DUF5983 family protein | - |
| NBY16_RS20425 (4235741) | 4235741..4236115 | - | 375 | WP_023220442.1 | TA system toxin CbtA family protein | - |
| NBY16_RS20430 (4236161) | 4236161..4236808 | - | 648 | WP_048963607.1 | hypothetical protein | - |
| NBY16_RS20435 (4236805) | 4236805..4237176 | - | 372 | WP_048963606.1 | type IV toxin-antitoxin system YeeU family antitoxin | - |
| NBY16_RS20440 (4237148) | 4237148..4237516 | - | 369 | WP_023220439.1 | type IV toxin-antitoxin system YeeU family antitoxin | - |
| NBY16_RS20445 (4237534) | 4237534..4237755 | - | 222 | WP_048963605.1 | DUF987 family protein | - |
| NBY16_RS20450 (4237752) | 4237752..4238042 | - | 291 | WP_048963604.1 | hypothetical protein | - |
| NBY16_RS20455 (4238058) | 4238058..4238537 | - | 480 | WP_048963603.1 | DNA repair protein RadC | - |
| NBY16_RS20460 (4238548) | 4238548..4239024 | - | 477 | WP_048963602.1 | antirestriction protein | - |
| NBY16_RS20465 (4239105) | 4239105..4239488 | - | 384 | WP_048963601.1 | hypothetical protein | - |
| NBY16_RS20470 (4239640) | 4239640..4239894 | - | 255 | WP_001575635.1 | hypothetical protein | - |
| NBY16_RS20475 (4239894) | 4239894..4240712 | - | 819 | WP_048963600.1 | DUF932 domain-containing protein | - |
| NBY16_RS20480 (4240811) | 4240811..4241042 | - | 232 | Protein_4020 | DUF905 domain-containing protein | - |
| NBY16_RS20485 (4241114) | 4241114..4241563 | - | 450 | WP_048963599.1 | IrmA family protein | - |
| NBY16_RS20490 (4241560) | 4241560..4242015 | - | 456 | WP_000754598.1 | hypothetical protein | - |
| NBY16_RS20495 (4242054) | 4242054..4242689 | - | 636 | WP_020837117.1 | hypothetical protein | - |
| NBY16_RS20500 (4242686) | 4242686..4243399 | - | 714 | WP_048963598.1 | WYL domain-containing protein | - |
| NBY16_RS20505 (4243660) | 4243660..4244535 | - | 876 | WP_048963597.1 | GTPase family protein | - |
| NBY16_RS20510 (4244658) | 4244658..4245725 | - | 1068 | WP_048963596.1 | hypothetical protein | - |
| NBY16_RS20515 (4246185) | 4246185..4246391 | + | 207 | WP_023564418.1 | AlpA family transcriptional regulator | - |
| NBY16_RS20520 (4246489) | 4246489..4247082 | + | 594 | WP_023063466.1 | hypothetical protein | - |
| NBY16_RS20525 (4247298) | 4247298..4247867 | + | 570 | WP_023063467.1 | inovirus-type Gp2 protein | - |
| NBY16_RS20530 (4248047) | 4248047..4248469 | + | 423 | WP_023063468.1 | putative zinc ribbon protein | - |
| NBY16_RS20535 (4248457) | 4248457..4248871 | + | 415 | Protein_4031 | putative zinc ribbon protein | - |
| NBY16_RS20540 (4249551) | 4249551..4250138 | + | 588 | WP_023564423.1 | hypothetical protein | - |
| NBY16_RS20545 (4250180) | 4250180..4251787 | + | 1608 | WP_023063472.1 | type I restriction-modification system subunit M | - |
| NBY16_RS20550 (4251787) | 4251787..4253016 | + | 1230 | WP_023063473.1 | restriction endonuclease subunit S | - |
| NBY16_RS20555 (4253075) | 4253075..4255990 | + | 2916 | WP_023063474.1 | type I restriction endonuclease subunit R | - |
| NBY16_RS20560 (4256125) | 4256125..4256691 | + | 567 | WP_048963595.1 | hypothetical protein | - |
| NBY16_RS20565 (4256688) | 4256688..4257518 | + | 831 | WP_023564425.1 | hypothetical protein | - |
| NBY16_RS20570 (4257857) | 4257857..4259128 | - | 1272 | WP_023220419.1 | integrase arm-type DNA-binding domain-containing protein | - |
| NBY16_RS20580 (4259610) | 4259610..4260629 | + | 1020 | WP_001433751.1 | NADPH-dependent aldehyde reductase Ahr | - |
| NBY16_RS20585 (4260759) | 4260759..4262261 | + | 1503 | WP_048963594.1 | DUF853 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|