MGE detailed information
MGE type: Genomic_island MGE length: 71673 bp
Accession: NZ_CP098206 Location: 4492355..4564027 Organism: Escherichia coli strain Z0117EC0054 Replicon: chromosome
Accession: NZ_CP098206 Location: 4492355..4564027 Organism: Escherichia coli strain Z0117EC0054 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NBY18_RS21995 (4487831) | 4487831..4488169 | + | 339 | WP_000883409.1 | divalent cation tolerance protein CutA | - |
| NBY18_RS22000 (4488145) | 4488145..4489842 | + | 1698 | WP_000068942.1 | protein-disulfide reductase DsbD | - |
| NBY18_RS22005 (4489879) | 4489879..4490454 | + | 576 | WP_001188520.1 | transcriptional regulator | - |
| NBY18_RS22015 (4490834) | 4490834..4492099 | + | 1266 | WP_001218869.1 | integrase arm-type DNA-binding domain-containing protein | - |
| NBY18_RS22020 (4492355) | 4492355..4493398 | + | 1044 | WP_000147021.1 | hypothetical protein | - |
| NBY18_RS22025 (4493928) | 4493928..4494625 | + | 698 | WP_224053098.1 | IS1 family transposase IS1S | Transposase |
| NBY18_RS22030 (4494642) | 4494642..4495433 | + | 792 | Protein_4318 | IS3 family transposase | - |
| NBY18_RS22035 (4495600) | 4495600..4496151 | + | 552 | WP_001447126.1 | Transcriptional repressor MprA | VF |
| NBY18_RS22045 (4497458) | 4497458..4498957 | - | 1500 | WP_001331567.1 | basic amino acid/polyamine antiporter | - |
| NBY18_RS22050 (4499032) | 4499032..4501401 | - | 2370 | WP_000671170.1 | Orn/Lys/Arg decarboxylase N-terminal domain-containing protein | - |
| NBY18_RS22055 (4501506) | 4501506..4502975 | - | 1470 | WP_001331566.1 | basic amino acid/polyamine antiporter | - |
| NBY18_RS22060 (4503228) | 4503228..4503921 | + | 694 | Protein_4324 | IS1 family transposase IS1N | Transposase |
| NBY18_RS22065 (4504539) | 4504539..4504886 | + | 348 | WP_000477079.1 | alcohol dehydrogenase catalytic domain-containing protein | - |
| NBY18_RS22070 (4504956) | 4504956..4506112 | + | 1157 | WP_099133509.1 | IS3 family transposase | - |
| NBY18_RS22075 (4506133) | 4506133..4506318 | + | 186 | Protein_4327 | IS66 family transposase IS682 | Transposase |
| NBY18_RS22080 (4506453) | 4506453..4507781 | + | 1329 | WP_000019624.1 | nucleotidyltransferase | - |
| NBY18_RS22085 (4507789) | 4507789..4508364 | + | 576 | WP_000194395.1 | SLATT domain-containing protein | - |
| NBY18_RS22090 (4508917) | 4508917..4509642 | - | 726 | WP_000020778.1 | TatD family hydrolase | - |
| NBY18_RS22095 (4509639) | 4509639..4510943 | - | 1305 | WP_000192872.1 | hypothetical protein | - |
| NBY18_RS22100 (4510940) | 4510940..4511692 | - | 753 | WP_000537317.1 | hypothetical protein | - |
| NBY18_RS22105 (4511692) | 4511692..4513476 | - | 1785 | WP_000269403.1 | P-loop NTPase fold protein | - |
| NBY18_RS22110 (4513608) | 4513608..4515071 | - | 1464 | WP_250789175.1 | hypothetical protein | - |
| NBY18_RS22115 (4515310) | 4515310..4515786 | - | 477 | Protein_4335 | VasL domain-containing protein | - |
| NBY18_RS22120 (4515786) | 4515786..4516130 | - | 345 | Protein_4336 | POTRA domain-containing protein | - |
| NBY18_RS22125 (4516810) | 4516810..4517001 | + | 192 | WP_001287878.1 | DUF4222 domain-containing protein | - |
| NBY18_RS22130 (4517054) | 4517054..4517287 | - | 234 | WP_000124175.1 | hypothetical protein | - |
| NBY18_RS22135 (4517383) | 4517383..4517882 | - | 500 | Protein_4339 | DNA-binding protein | - |
| NBY18_RS22140 (4518233) | 4518233..4519351 | + | 1119 | WP_000135343.1 | NAD-dependent methanol dehydrogenase | VF |
| NBY18_RS22145 (4519491) | 4519491..4520177 | + | 687 | WP_001109982.1 | propanediol utilization system phosphotransacylase GrpB | - |
| NBY18_RS22150 (4520232) | 4520232..4520990 | + | 759 | WP_001332070.1 | propanediol utilization system chaperone GrpC | - |
| NBY18_RS22155 (4520974) | 4520974..4521699 | + | 726 | WP_002430742.1 | propanediol utilization system flavoprotein GrpD | - |
| NBY18_RS22160 (4521711) | 4521711..4521980 | + | 270 | WP_000280292.1 | propanediol utilization microcompartment vertex protein GrpE | - |
| NBY18_RS22165 (4522008) | 4522008..4522505 | + | 498 | WP_001332069.1 | propanediol utilization system heme-binding protein GrpF | - |
| NBY18_RS22170 (4522534) | 4522534..4523730 | + | 1197 | WP_001362987.1 | propanediol utilization system propionate kinase GrpG | - |
| NBY18_RS22175 (4524015) | 4524015..4524296 | + | 282 | WP_001301171.1 | propanediol utilization system shell hexameric protein GrpH | - |
| NBY18_RS22180 (4524318) | 4524318..4525103 | + | 786 | WP_001205499.1 | propanediol utilization microcompartment protein GrpI | - |
| NBY18_RS22185 (4525164) | 4525164..4526681 | + | 1518 | WP_000997839.1 | N-succinylglutamate 5-semialdehyde dehydrogenase | VF |
| NBY18_RS22190 (4526705) | 4526705..4527004 | + | 300 | WP_000746009.1 | propanediol utilization system shell hexameric protein GrpK | - |
| NBY18_RS22195 (4527015) | 4527015..4527590 | + | 576 | WP_000722279.1 | propanediol utilization system protease GrpL | - |
| NBY18_RS22200 (4527639) | 4527639..4530191 | + | 2553 | WP_000890295.1 | glycyl radical diol dehydratase GrpM | - |
| NBY18_RS22205 (4530300) | 4530300..4531217 | + | 918 | WP_001044977.1 | glycyl radical diol dehydratase-activating enzyme GrpN | - |
| NBY18_RS22210 (4531354) | 4531354..4532259 | + | 906 | WP_001086421.1 | propanediol utilization system permease GrpO | - |
| NBY18_RS22215 (4532745) | 4532745..4533284 | + | 540 | WP_001332064.1 | maturase | - |
| NBY18_RS22220 (4533312) | 4533312..4533833 | + | 522 | WP_000237741.1 | reverse transcriptase domain-containing protein | - |
| NBY18_RS22225 (4534383) | 4534383..4535645 | + | 1263 | WP_001329690.1 | propanediol utilization sensor histidine kinase GrpP | - |
| NBY18_RS22230 (4535662) | 4535662..4536717 | + | 1056 | WP_000494233.1 | HTH-type transcriptional activator RhaR | VF |
| NBY18_RS22235 (4536846) | 4536846..4537997 | + | 1152 | WP_001001005.1 | propanediol utilization system methionine adenosyltransferase GrpR | - |
| NBY18_RS22240 (4538042) | 4538042..4538587 | + | 546 | WP_000015571.1 | propanediol utilization system shell hexameric protein GrpS | - |
| NBY18_RS22245 (4538944) | 4538944..4539129 | - | 186 | WP_223349228.1 | helix-turn-helix domain-containing protein | - |
| NBY18_RS22250 (4539080) | 4539080..4539289 | - | 210 | WP_001332061.1 | hypothetical protein | VF |
| NBY18_RS22255 (4539561) | 4539561..4539926 | - | 366 | WP_001699205.1 | TetR family transcriptional regulator | - |
| NBY18_RS22260 (4540032) | 4540032..4541177 | - | 1146 | Protein_4364 | Multidrug resistance protein MexB | VF |
| NBY18_RS22265 (4541280) | 4541280..4541540 | + | 261 | Protein_4365 | IS3 family transposase IS2 | Transposase |
| NBY18_RS22270 (4541532) | 4541532..4541594 | - | 63 | Protein_4366 | IS3 family transposase IS2 | Transposase |
| NBY18_RS26540 (4541723) | 4541723..4541848 | - | 126 | WP_000831909.1 | hypothetical protein | - |
| NBY18_RS22275 (4541845) | 4541845..4542078 | - | 234 | WP_000958492.1 | AlpA family transcriptional regulator | - |
| NBY18_RS22280 (4542147) | 4542147..4542722 | - | 576 | WP_000991593.1 | hypothetical protein | - |
| NBY18_RS22285 (4543069) | 4543069..4543800 | - | 732 | WP_001075472.1 | inovirus Gp2 family protein | - |
| NBY18_RS22290 (4545253) | 4545253..4546476 | - | 1224 | WP_001107219.1 | hypothetical protein | - |
| NBY18_RS22295 (4546577) | 4546577..4547461 | + | 885 | WP_001116794.1 | YfjP family GTPase | - |
| NBY18_RS22300 (4547664) | 4547664..4548344 | + | 681 | WP_001278649.1 | WYL domain-containing protein | - |
| NBY18_RS22305 (4548495) | 4548495..4549172 | + | 678 | WP_001097565.1 | hypothetical protein | - |
| NBY18_RS22310 (4549178) | 4549178..4549411 | + | 234 | WP_000883181.1 | DUF905 family protein | - |
| NBY18_RS22315 (4549501) | 4549501..4550319 | + | 819 | WP_001175155.1 | DUF932 domain-containing protein | - |
| NBY18_RS22320 (4550585) | 4550585..4551064 | + | 480 | WP_000706978.1 | antirestriction protein | - |
| NBY18_RS22325 (4551079) | 4551079..4551555 | + | 477 | WP_001186193.1 | RadC family protein | - |
| NBY18_RS22330 (4551642) | 4551642..4551863 | + | 222 | WP_000692347.1 | DUF987 domain-containing protein | - |
| NBY18_RS22335 (4551943) | 4551943..4552311 | + | 369 | WP_001285610.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| NBY18_RS22340 (4552400) | 4552400..4552777 | + | 378 | WP_000854820.1 | type IV toxin-antitoxin system cytoskeleton-binding toxin CbtA | Toxin Detail |
| NBY18_RS22345 (4552774) | 4552774..4552971 | + | 198 | Protein_4382 | DUF5983 family protein | - |
| NBY18_RS22350 (4552999) | 4552999..4553196 | + | 198 | WP_085949158.1 | DUF957 domain-containing protein | - |
| NBY18_RS22355 (4553281) | 4553281..4553841 | + | 561 | Protein_4384 | DUF4942 domain-containing protein | - |
| NBY18_RS22360 (4554676) | 4554676..4556214 | + | 1539 | WP_001187191.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| NBY18_RS22365 (4556580) | 4556580..4557914 | + | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| NBY18_RS22370 (4557994) | 4557994..4560141 | + | 2148 | WP_001296667.1 | lysine decarboxylase CadA | - |
| NBY18_RS22375 (4560200) | 4560200..4561657 | + | 1458 | WP_000856826.1 | dipeptide/tripeptide permease DtpC | - |
| NBY18_RS22380 (4561894) | 4561894..4563411 | + | 1518 | WP_000003806.1 | lysine--tRNA ligase | - |
| NBY18_RS22385 (4563530) | 4563530..4563703 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| NBY18_RS22390 (4563731) | 4563731..4564027 | - | 297 | WP_001312331.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| NBY18_RS22395 (4564255) | 4564255..4564527 | - | 273 | WP_000405647.1 | GNAT family N-acetyltransferase | - |
| NBY18_RS22400 (4564539) | 4564539..4564769 | - | 231 | WP_000373293.1 | 4Fe-4S mono-cluster protein YjdI | - |
| NBY18_RS22405 (4564950) | 4564950..4566581 | + | 1632 | WP_001216482.1 | sensor histidine kinase | - |
| NBY18_RS22410 (4566578) | 4566578..4567297 | + | 720 | WP_000611291.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|