MGE detailed information
MGE type: Conjugative plasmid MGE length: 68004 bp
Accession: NZ_CP098204 Location: 1..68004 Organism: Escherichia coli strain Z0117EC0055 Replicon: plasmid pZ0117ECO055-1
Accession: NZ_CP098204 Location: 1..68004 Organism: Escherichia coli strain Z0117EC0055 Replicon: plasmid pZ0117ECO055-1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NBY19_RS24190 (687) | 687..1139 | + | 453 | WP_000670962.1 | acyltransferase | - |
| NBY19_RS24195 (1542) | 1542..1892 | - | 351 | WP_001365718.1 | plasmid partitioning/stability family protein | - |
| NBY19_RS24200 (1895) | 1895..2857 | - | 963 | WP_000959884.1 | plasmid segregation protein ParM | - |
| NBY19_RS24205 (2985) | 2985..3296 | + | 312 | WP_227547987.1 | hypothetical protein | - |
| NBY19_RS24210 (3391) | 3391..4293 | + | 903 | WP_001386431.1 | DUF1281 domain-containing protein | - |
| NBY19_RS24215 (4290) | 4290..4601 | + | 312 | WP_032144809.1 | hypothetical protein | - |
| NBY19_RS24220 (4678) | 4678..5361 | + | 684 | WP_059338991.1 | DNA methylase | - |
| NBY19_RS24225 (5362) | 5362..5583 | + | 222 | WP_001464085.1 | hypothetical protein | - |
| NBY19_RS24230 (5513) | 5513..6031 | + | 519 | WP_224955273.1 | DUF1380 family protein | - |
| NBY19_RS24235 (6076) | 6076..6846 | + | 771 | WP_059338985.1 | hypothetical protein | - |
| NBY19_RS24240 (7260) | 7260..7685 | + | 426 | WP_001198914.1 | antirestriction protein | - |
| NBY19_RS24245 (7732) | 7732..8151 | + | 420 | WP_059339011.1 | DUF1380 family protein | - |
| NBY19_RS24250 (8151) | 8151..8342 | + | 192 | WP_001027049.1 | hypothetical protein | - |
| NBY19_RS24255 (8321) | 8321..8792 | - | 472 | Protein_14 | hypothetical protein | - |
| NBY19_RS24260 (9310) | 9310..9542 | + | 233 | Protein_15 | hypothetical protein | - |
| NBY19_RS24265 (9594) | 9594..10956 | + | 1363 | Protein_16 | DUF3560 domain-containing protein | - |
| NBY19_RS24270 (11003) | 11003..11566 | + | 564 | WP_001298559.1 | class I SAM-dependent methyltransferase | - |
| NBY19_RS24275 (11652) | 11652..12104 | - | 453 | WP_250844074.1 | hypothetical protein | - |
| NBY19_RS24280 (12406) | 12406..12933 | + | 528 | WP_000290833.1 | single-stranded DNA-binding protein | - |
| NBY19_RS24285 (12990) | 12990..13224 | + | 235 | Protein_20 | DUF905 family protein | - |
| NBY19_RS24290 (13286) | 13286..15270 | + | 1985 | Protein_21 | ParB/RepB/Spo0J family partition protein | - |
| NBY19_RS24295 (15375) | 15375..15629 | + | 255 | WP_250844077.1 | conjugation system SOS inhibitor PsiB family protein | - |
| NBY19_RS24300 (15550) | 15550..15777 | + | 228 | Protein_23 | conjugation system SOS inhibitor PsiB family protein | - |
| NBY19_RS24305 (15796) | 15796..16550 | + | 755 | Protein_24 | plasmid SOS inhibition protein A | - |
| NBY19_RS24310 (16528) | 16528..16707 | - | 180 | WP_001309233.1 | hypothetical protein | - |
| - (16519) | 16519..16743 | + | 225 | NuclAT_0 | - | - |
| - (16519) | 16519..16743 | + | 225 | NuclAT_0 | - | - |
| - (16519) | 16519..16743 | + | 225 | NuclAT_0 | - | - |
| - (16519) | 16519..16743 | + | 225 | NuclAT_0 | - | - |
| NBY19_RS24315 (16729) | 16729..16878 | + | 150 | Protein_26 | plasmid maintenance protein Mok | - |
| NBY19_RS24320 (16820) | 16820..16945 | + | 126 | WP_001372321.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| NBY19_RS24325 (17264) | 17264..17561 | - | 298 | Protein_28 | hypothetical protein | - |
| NBY19_RS24330 (17861) | 17861..18157 | + | 297 | WP_001272251.1 | hypothetical protein | - |
| NBY19_RS24335 (18268) | 18268..19099 | + | 832 | Protein_30 | DUF932 domain-containing protein | - |
| NBY19_RS24340 (19388) | 19388..19980 | - | 593 | Protein_31 | transglycosylase SLT domain-containing protein | - |
| NBY19_RS24345 (20325) | 20325..20708 | + | 384 | WP_250844075.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| NBY19_RS24350 (20900) | 20900..21562 | + | 663 | WP_250844076.1 | conjugal transfer protein TrbJ | - |
| NBY19_RS24355 (21666) | 21666..21893 | + | 228 | WP_000589556.1 | conjugal transfer relaxosome protein TraY | - |
| NBY19_RS24360 (21927) | 21927..22290 | + | 364 | Protein_35 | type IV conjugative transfer system pilin TraA | - |
| NBY19_RS24365 (22305) | 22305..22616 | + | 312 | WP_000012100.1 | type IV conjugative transfer system protein TraL | - |
| NBY19_RS24370 (22638) | 22638..23207 | + | 570 | Protein_37 | type IV conjugative transfer system protein TraE | - |
| NBY19_RS24375 (23194) | 23194..23926 | + | 733 | Protein_38 | type-F conjugative transfer system secretin TraK | - |
| NBY19_RS24380 (23926) | 23926..25433 | + | 1508 | Protein_39 | F-type conjugal transfer pilus assembly protein TraB | - |
| NBY19_RS24385 (25346) | 25346..25937 | + | 592 | Protein_40 | conjugal transfer pilus-stabilizing protein TraP | - |
| NBY19_RS24390 (25924) | 25924..26248 | + | 325 | Protein_41 | conjugal transfer protein TrbD | - |
| NBY19_RS24395 (26245) | 26245..26760 | + | 516 | WP_000809881.1 | type IV conjugative transfer system lipoprotein TraV | - |
| NBY19_RS24400 (26895) | 26895..27118 | + | 224 | Protein_43 | conjugal transfer protein TraR | - |
| NBY19_RS24405 (27111) | 27111..27587 | + | 477 | WP_012881127.1 | hypothetical protein | - |
| NBY19_RS24410 (27686) | 27686..27904 | + | 219 | WP_000556745.1 | hypothetical protein | - |
| NBY19_RS24415 (27932) | 27932..28279 | + | 348 | WP_000836682.1 | hypothetical protein | - |
| NBY19_RS24420 (28405) | 28405..31046 | + | 2642 | Protein_47 | type IV secretion system protein TraC | - |
| NBY19_RS24425 (31043) | 31043..31433 | + | 391 | Protein_48 | type-F conjugative transfer system protein TrbI | - |
| NBY19_RS24430 (31430) | 31430..32062 | + | 633 | WP_231526405.1 | type-F conjugative transfer system protein TraW | - |
| NBY19_RS24435 (32059) | 32059..33051 | + | 993 | WP_000830849.1 | conjugal transfer pilus assembly protein TraU | - |
| NBY19_RS24440 (33081) | 33081..33386 | + | 306 | WP_000224418.1 | hypothetical protein | - |
| NBY19_RS24445 (33395) | 33395..34033 | + | 639 | WP_012881126.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| NBY19_RS24450 (34030) | 34030..35880 | + | 1851 | WP_012881125.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| NBY19_RS24455 (35907) | 35907..36169 | + | 263 | Protein_54 | conjugal transfer protein TrbE | - |
| NBY19_RS24460 (36162) | 36162..36906 | + | 745 | Protein_55 | type-F conjugative transfer system pilin assembly protein TraF | - |
| NBY19_RS24465 (36920) | 36920..37261 | + | 342 | WP_000556795.1 | conjugal transfer protein TrbA | - |
| NBY19_RS24470 (37242) | 37242..37577 | - | 336 | WP_000736414.1 | hypothetical protein | - |
| NBY19_RS24475 (37658) | 37658..37942 | + | 285 | WP_000624107.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| NBY19_RS24480 (37929) | 37929..38476 | + | 548 | Protein_59 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| NBY19_RS24485 (38406) | 38406..38753 | + | 348 | WP_001309242.1 | P-type conjugative transfer protein TrbJ | - |
| NBY19_RS24490 (38734) | 38734..39126 | + | 393 | WP_000660700.1 | F-type conjugal transfer protein TrbF | - |
| NBY19_RS24495 (39113) | 39113..40486 | + | 1374 | WP_000944331.1 | conjugal transfer pilus assembly protein TraH | - |
| NBY19_RS24500 (40483) | 40483..43318 | + | 2836 | Protein_63 | conjugal transfer mating-pair stabilization protein TraG | - |
| NBY19_RS24505 (43339) | 43339..43695 | + | 357 | Protein_64 | surface exclusion protein | - |
| NBY19_RS24510 (43882) | 43882..44613 | + | 732 | WP_012881123.1 | conjugal transfer complement resistance protein TraT | - |
| NBY19_RS24515 (44816) | 44816..45553 | + | 738 | WP_012881122.1 | hypothetical protein | - |
| NBY19_RS24520 (45604) | 45604..47856 | + | 2253 | WP_078207383.1 | type IV conjugative transfer system coupling protein TraD | - |
| NBY19_RS24525 (47856) | 47856..53126 | + | 5271 | WP_000948349.1 | Multifunctional conjugation protein TraI | Relaxase |
| NBY19_RS24530 (53146) | 53146..53892 | + | 747 | WP_059338983.1 | conjugal transfer pilus acetylase TraX | - |
| NBY19_RS24535 (53951) | 53951..54811 | + | 861 | WP_000704523.1 | Quorum-quenching protein AidA | VF |
| NBY19_RS24540 (54914) | 54914..55474 | + | 561 | WP_000139321.1 | fertility inhibition protein FinO | - |
| NBY19_RS24545 (55603) | 55603..55815 | + | 213 | WP_001309245.1 | ANR family transcriptional regulator | - |
| NBY19_RS24550 (56060) | 56060..56521 | + | 462 | WP_001233838.1 | thermonuclease family protein | - |
| NBY19_RS24555 (56567) | 56567..56776 | + | 210 | WP_001298565.1 | hemolysin expression modulator Hha | - |
| NBY19_RS24560 (56814) | 56814..57404 | + | 591 | WP_033807967.1 | DUF2726 domain-containing protein | - |
| NBY19_RS24565 (57559) | 57559..58032 | + | 474 | WP_016240489.1 | hypothetical protein | - |
| - (58175) | 58175..58234 | - | 60 | NuclAT_1 | - | Antitoxin Detail |
| - (58175) | 58175..58234 | - | 60 | NuclAT_1 | - | Antitoxin Detail |
| - (58175) | 58175..58234 | - | 60 | NuclAT_1 | - | Antitoxin Detail |
| - (58175) | 58175..58234 | - | 60 | NuclAT_1 | - | Antitoxin Detail |
| NBY19_RS24570 (58279) | 58279..58428 | + | 150 | WP_001312851.1 | Hok/Gef family protein | Toxin Detail |
| NBY19_RS24575 (58713) | 58713..58961 | + | 249 | WP_000083839.1 | replication regulatory protein RepA | - |
| NBY19_RS24580 (59206) | 59206..59280 | + | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| NBY19_RS24585 (59273) | 59273..60130 | + | 858 | WP_016240488.1 | incFII family plasmid replication initiator RepA | - |
| NBY19_RS24590 (61040) | 61040..61177 | + | 138 | Protein_81 | XRE family transcriptional regulator | - |
| NBY19_RS24595 (61197) | 61197..61460 | + | 264 | WP_001089473.1 | hypothetical protein | - |
| NBY19_RS24600 (61450) | 61450..61749 | + | 300 | WP_001528606.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| NBY19_RS24605 (61785) | 61785..62450 | - | 666 | WP_001535733.1 | hypothetical protein | - |
| NBY19_RS24610 (63020) | 63020..63583 | - | 564 | WP_000351267.1 | pentapeptide repeat-containing protein | - |
| NBY19_RS24615 (63587) | 63587..64318 | - | 732 | WP_000155032.1 | ATP-binding cassette domain-containing protein | - |
| NBY19_RS24620 (64315) | 64315..65040 | - | 726 | WP_000258040.1 | microcin B17 immunity protein McbE | - |
| NBY19_RS24625 (65050) | 65050..66189 | - | 1140 | WP_231529308.1 | YcaO-like family protein | - |
| NBY19_RS24630 (66221) | 66221..67039 | - | 819 | WP_001528601.1 | SagB/ThcOx family dehydrogenase | - |
| NBY19_RS24635 (67041) | 67041..67895 | - | 855 | WP_001528600.1 | McbB family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|