MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 78537 bp
Accession: NZ_CP098202 Location: 1..78537 Organism: Escherichia coli strain Z0117EC0056 Replicon: plasmid pZ0117EC0056-1
Accession: NZ_CP098202 Location: 1..78537 Organism: Escherichia coli strain Z0117EC0056 Replicon: plasmid pZ0117EC0056-1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NBY20_RS24770 () | 23..576 | + | 554 | Protein_0 | TOBE domain-containing protein | - |
| NBY20_RS24775 () | 666..1736 | + | 1071 | Protein_1 | maltoporin LamB | - |
| NBY20_RS24780 () | 1771..2253 | - | 483 | WP_001311056.1 | hypothetical protein | - |
| NBY20_RS24785 () | 2370..3218 | - | 849 | WP_012881117.1 | 3'-5' exonuclease | - |
| NBY20_RS24790 () | 3264..3542 | - | 279 | WP_244449344.1 | type II toxin-antitoxin system toxin YacB | Toxin Detail |
| NBY20_RS24795 () | 3542..3811 | - | 270 | WP_012881119.1 | type II toxin-antitoxin system antitoxin YacA | Antitoxin Detail |
| NBY20_RS24800 () | 3866..4024 | - | 159 | WP_166740453.1 | hypothetical protein | - |
| NBY20_RS24805 () | 4726..5583 | - | 858 | WP_000130940.1 | incFII family plasmid replication initiator RepA | - |
| NBY20_RS24810 () | 5576..5623 | - | 48 | WP_077822033.1 | hypothetical protein | - |
| NBY20_RS24815 () | 5614..5850 | + | 237 | WP_223368648.1 | replication protein RepA | - |
| NBY20_RS24820 () | 5876..6136 | - | 261 | WP_000083818.1 | replication regulatory protein RepA | - |
| NBY20_RS24825 () | 6375..6948 | - | 574 | Protein_11 | DUF2726 domain-containing protein | - |
| NBY20_RS24830 () | 6986..7195 | - | 210 | WP_001333231.1 | hemolysin expression modulator Hha | - |
| NBY20_RS24835 () | 7241..7702 | - | 462 | WP_001233871.1 | thermonuclease family protein | - |
| NBY20_RS24840 () | 7945..8157 | - | 213 | WP_012311405.1 | hypothetical protein | - |
| NBY20_RS24845 () | 8295..8855 | - | 561 | WP_000139359.1 | fertility inhibition protein FinO | - |
| NBY20_RS24850 () | 8910..9656 | - | 747 | WP_000205777.1 | conjugal transfer pilus acetylase TraX | - |
| NBY20_RS24855 () | 9676..14946 | - | 5271 | WP_011117356.1 | Multifunctional conjugation protein TraI | Relaxase |
| NBY20_RS24860 () | 15028..15255 | + | 228 | WP_000450532.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| NBY20_RS24865 () | 15255..15653 | + | 399 | WP_000911324.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| NBY20_RS24870 () | 15662..16825 | - | 1164 | Protein_20 | type IV secretion system DNA-binding domain-containing protein | - |
| NBY20_RS24875 () | 16878..17582 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| NBY20_RS24880 () | 17626..17724 | + | 99 | Protein_22 | complement resistance protein TraT | - |
| NBY20_RS24885 () | 17977..18975 | + | 999 | Protein_23 | type IV secretion system DNA-binding domain-containing protein | - |
| NBY20_RS24890 () | 19038..19742 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| NBY20_RS24895 () | 19748..20172 | + | 425 | Protein_25 | IS3 family transposase IS2 | Transposase |
| NBY20_RS24900 () | 20709..20981 | + | 273 | WP_001322642.1 | adhesin biosynthesis transcription regulatory family protein | - |
| NBY20_RS24905 () | 21427..21602 | + | 176 | Protein_27 | IS3 family transposase | - |
| NBY20_RS24910 () | 21828..22997 | - | 1170 | WP_001072358.1 | hypothetical protein | - |
| NBY20_RS24915 () | 23364..23552 | + | 189 | WP_032141192.1 | hypothetical protein | - |
| NBY20_RS24920 () | 23673..24413 | + | 741 | WP_001066954.1 | tyrosine-type recombinase/integrase | - |
| NBY20_RS24925 () | 24698..25675 | - | 978 | WP_000361611.1 | RepB family plasmid replication initiator protein | - |
| NBY20_RS24930 () | 26421..26744 | + | 324 | Protein_32 | IS21 family transposase IS21 | Transposase |
| NBY20_RS24935 () | 26746..26850 | + | 105 | Protein_33 | AAA family ATPase | - |
| NBY20_RS24940 () | 26911..27424 | + | 514 | Protein_34 | DUF4113 domain-containing protein | - |
| NBY20_RS24950 () | 28657..29571 | + | 915 | WP_000949004.1 | putative periplasmic iron-binding protein | VF |
| NBY20_RS24955 () | 29571..30398 | + | 828 | WP_000983710.1 | Manganese transport system ATP-binding protein MntB | VF |
| NBY20_RS24960 () | 30395..31252 | + | 858 | WP_000992806.1 | Manganese transport system membrane protein MntB | ARG |
| NBY20_RS24965 () | 31249..32106 | + | 858 | WP_000968139.1 | Manganese transport system membrane protein MntB | ARG |
| NBY20_RS24970 () | 32340..32597 | - | 258 | Protein_40 | Tn3 family transposase | - |
| NBY20_RS24975 () | 32595..32726 | + | 132 | Protein_41 | phosphopyruvate hydratase | - |
| NBY20_RS24980 () | 32699..32950 | - | 252 | WP_013362826.1 | hypothetical protein | - |
| NBY20_RS24985 () | 33390..33869 | - | 480 | WP_000190053.1 | hypothetical protein | - |
| NBY20_RS24990 () | 34011..34436 | + | 426 | WP_012300440.1 | hypothetical protein | - |
| NBY20_RS24995 () | 34913..35610 | + | 698 | WP_223369285.1 | IS1 family transposase IS1A | Transposase |
| NBY20_RS25000 () | 35910..37076 | + | 1167 | WP_001238646.1 | hypothetical protein | VF |
| NBY20_RS25005 () | 37076..38047 | + | 972 | WP_000817028.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| NBY20_RS25010 () | 38813..38982 | + | 170 | Protein_48 | hypothetical protein | - |
| NBY20_RS25015 () | 38979..39326 | + | 348 | WP_001350917.1 | hypothetical protein | - |
| NBY20_RS25020 () | 39395..39730 | + | 336 | WP_000343070.1 | hypothetical protein | - |
| NBY20_RS25025 () | 39781..40478 | + | 698 | WP_231453675.1 | IS1 family transposase IS1G | Transposase |
| NBY20_RS25030 () | 40492..41256 | - | 765 | Protein_52 | IS110 family transposase ISEc32 | Transposase |
| NBY20_RS25035 () | 41658..42083 | + | 426 | WP_001198922.1 | antirestriction protein | - |
| NBY20_RS25040 () | 42083..42544 | + | 462 | WP_042007484.1 | DUF1380 family protein | - |
| NBY20_RS25045 () | 42544..42726 | + | 183 | WP_001027505.1 | hypothetical protein | - |
| NBY20_RS25050 () | 42950..43203 | - | 254 | Protein_56 | hypothetical protein | - |
| NBY20_RS25055 () | 43720..43950 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| NBY20_RS25060 () | 44002..45363 | + | 1362 | WP_000170681.1 | DUF3560 domain-containing protein | - |
| NBY20_RS25065 () | 45409..45972 | + | 564 | WP_001311069.1 | class I SAM-dependent methyltransferase | - |
| NBY20_RS25070 () | 45972..46220 | + | 249 | WP_012311402.1 | hypothetical protein | - |
| NBY20_RS25075 () | 46124..46390 | + | 267 | WP_072254135.1 | hypothetical protein | - |
| NBY20_RS25080 () | 46863..47390 | + | 528 | WP_000290793.1 | single-stranded DNA-binding protein | - |
| NBY20_RS25085 () | 47446..47679 | + | 234 | WP_000006004.1 | DUF905 domain-containing protein | - |
| NBY20_RS25090 () | 47738..49696 | + | 1959 | WP_001145469.1 | ParB/RepB/Spo0J family partition protein | - |
| NBY20_RS25095 () | 49751..50185 | + | 435 | WP_000845901.1 | conjugation system SOS inhibitor PsiB | - |
| NBY20_RS25100 () | 50182..50944 | + | 763 | Protein_66 | plasmid SOS inhibition protein A | - |
| NBY20_RS25105 () | 50913..51101 | - | 189 | WP_001299721.1 | hypothetical protein | - |
| - () | 50913..51137 | + | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 50913..51137 | + | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 50913..51137 | + | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 50913..51137 | + | 225 | NuclAT_0 | - | Antitoxin Detail |
| - | 51070..51135 | - | 66 | - | - | Antitoxin Detail |
| NBY20_RS25110 () | 51123..51272 | + | 150 | Protein_68 | plasmid maintenance protein Mok | - |
| NBY20_RS25115 () | 51214..51339 | + | 126 | WP_001372321.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| NBY20_RS25120 () | 51559..51777 | + | 219 | WP_071780187.1 | hypothetical protein | - |
| NBY20_RS25125 () | 51898..52602 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| NBY20_RS25130 () | 52724..53629 | + | 906 | WP_000219391.1 | hypothetical protein | ARG |
| NBY20_RS25135 () | 53626..54864 | + | 1239 | WP_000004159.1 | macrolide resistance MFS transporter Mrx(A) | - |
| NBY20_RS25140 () | 54864..55448 | + | 585 | WP_001137892.1 | macrolide-binding transcriptional repressor MphR(A) | - |
| NBY20_RS25145 () | 55941..56705 | - | 765 | WP_001389365.1 | IS6 family transposase IS6100 | Transposase |
| NBY20_RS25150 () | 56823..56888 | - | 66 | Protein_76 | EAL domain-containing protein | - |
| NBY20_RS25155 () | 56932..57237 | - | 306 | WP_000130000.1 | Transcriptional regulator | Relaxase |
| NBY20_RS25160 () | 57248..58453 | - | 1206 | WP_000184001.1 | chromate efflux transporter | - |
| NBY20_RS25165 () | 58609..58812 | - | 204 | WP_000376616.1 | hypothetical protein | - |
| NBY20_RS25170 () | 58940..59779 | - | 840 | WP_000259031.1 | Dihydropteroate synthase | ARG |
| NBY20_RS25175 () | 59773..60120 | - | 348 | WP_000679427.1 | Multidrug transporter EmrE | ARG |
| NBY20_RS25180 () | 60304..60777 | - | 474 | WP_001317507.1 | Dihydrofolate reductase type 1 | ARG |
| NBY20_RS25185 () | 60933..61946 | + | 1014 | WP_000845048.1 | IS91 family transposase ISAzo26 | Transposase |
| NBY20_RS25190 () | 62182..62886 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| NBY20_RS25195 () | 63077..63556 | - | 480 | Protein_85 | IS3 family transposase IS629 | Transposase |
| NBY20_RS25200 () | 63640..65148 | - | 1509 | WP_001189111.1 | group II intron reverse transcriptase/maturase | - |
| NBY20_RS25350 () | 65187..65309 | - | 123 | WP_001406634.1 | hypothetical protein | - |
| NBY20_RS25205 () | 65821..66560 | - | 740 | Protein_88 | IS3 family transposase IS629 | Transposase |
| NBY20_RS25210 () | 66615..66863 | - | 249 | Protein_89 | IS21 family transposase IS21 | Transposase |
| NBY20_RS25215 () | 67346..68098 | + | 753 | WP_000471454.1 | Chaperone protein caf1M | VF |
| NBY20_RS25220 () | 68125..70677 | + | 2553 | WP_000392724.1 | F1 capsule-anchoring protein | VF |
| NBY20_RS25225 () | 70693..71115 | + | 423 | WP_000243157.1 | Protein AfaD | VF |
| NBY20_RS25230 () | 71223..71708 | + | 486 | WP_021547907.1 | Dr family adhesin structural subunit | - |
| NBY20_RS25240 () | 73446..73862 | + | 417 | WP_000466682.1 | SdiA-regulated domain-containing protein | - |
| NBY20_RS25245 () | 74067..74798 | - | 732 | WP_224955279.1 | Virulence regulon transcriptional activator VirF | VF |
| NBY20_RS25250 () | 75140..75289 | + | 150 | Protein_97 | ABC transporter substrate-binding protein | - |
| NBY20_RS25255 () | 75289..76326 | + | 1038 | WP_001545318.1 | Hemin transport system permease protein HmuU | VF |
| NBY20_RS25260 () | 76326..77087 | + | 762 | WP_000020504.1 | Fe(3+) dicitrate transport ATP-binding protein FecE | VF |
| NBY20_RS25265 () | 77144..78331 | + | 1188 | WP_025999368.1 | MFS transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|