MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 91127 bp
Accession: NZ_CP098200 Location: 1..91127 Organism: Escherichia coli strain Z0117EC0062 Replicon: plasmid pZ0117EC0062-3
Accession: NZ_CP098200 Location: 1..91127 Organism: Escherichia coli strain Z0117EC0062 Replicon: plasmid pZ0117EC0062-3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NBY21_RS24945 (230) | 230..1633 | - | 1404 | WP_175107181.1 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| NBY21_RS24950 (1642) | 1642..2217 | - | 576 | WP_021560331.1 | prepilin peptidase | - |
| NBY21_RS24955 (2229) | 2229..2729 | - | 501 | WP_021560330.1 | hypothetical protein | VF |
| NBY21_RS24960 (2777) | 2777..3382 | - | 606 | WP_021560329.1 | hypothetical protein | VF |
| NBY21_RS24965 (3407) | 3407..4474 | - | 1068 | WP_021560328.1 | hypothetical protein | VF |
| NBY21_RS24970 (4464) | 4464..6002 | - | 1539 | WP_021560327.1 | hypothetical protein | VF |
| NBY21_RS24975 (5992) | 5992..6441 | - | 450 | WP_021560326.1 | type IV pilus biogenesis protein PilP | - |
| NBY21_RS24980 (6434) | 6434..7741 | - | 1308 | WP_021560325.1 | type 4b pilus protein PilO2 | - |
| NBY21_RS24985 (7749) | 7749..9251 | - | 1503 | WP_228182325.1 | hypothetical protein | VF |
| NBY21_RS24990 (9412) | 9412..9882 | - | 471 | WP_021560323.1 | type IV pilus biogenesis protein PilM | - |
| NBY21_RS24995 (9894) | 9894..11225 | - | 1332 | WP_021560322.1 | hypothetical protein | VF |
| NBY21_RS25000 (11369) | 11369..12064 | - | 696 | WP_021560321.1 | hypothetical protein | - |
| NBY21_RS25005 (12163) | 12163..12417 | - | 255 | WP_021560320.1 | PilI type IV pilus biogenesis protein | - |
| NBY21_RS25010 (12580) | 12580..13164 | - | 585 | WP_053285685.1 | hypothetical protein | - |
| NBY21_RS25015 (13161) | 13161..13439 | - | 279 | WP_019842576.1 | hypothetical protein | - |
| NBY21_RS25020 (13468) | 13468..13962 | - | 495 | WP_229015017.1 | hypothetical protein | - |
| NBY21_RS25025 (14063) | 14063..14743 | - | 681 | WP_021560317.1 | hypothetical protein | - |
| NBY21_RS25030 (15007) | 15007..15540 | - | 534 | WP_021560316.1 | transcription termination/antitermination NusG family protein | - |
| NBY21_RS25035 (15986) | 15986..16273 | - | 288 | WP_019842580.1 | conjugal transfer protein TraA | - |
| NBY21_RS25040 (16311) | 16311..16454 | - | 144 | Protein_19 | ash family protein | - |
| NBY21_RS25045 (17430) | 17430..18461 | + | 1032 | WP_024227073.1 | plasmid replication initiator RepA | - |
| NBY21_RS25050 (19414) | 19414..19665 | + | 252 | WP_021560314.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| NBY21_RS25055 (19662) | 19662..19949 | + | 288 | WP_001523468.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| NBY21_RS25060 (19959) | 19959..20504 | + | 546 | WP_001523466.1 | hypothetical protein | - |
| NBY21_RS25065 (20800) | 20800..21387 | + | 588 | WP_064550130.1 | Serine acetyltransferase | VF |
| NBY21_RS25070 (21667) | 21667..22260 | - | 594 | WP_001523457.1 | ProQ/FINO family protein | - |
| NBY21_RS25075 (23263) | 23263..24030 | + | 768 | WP_064550128.1 | helix-turn-helix domain-containing protein | - |
| NBY21_RS25080 (24191) | 24191..25300 | - | 1110 | WP_064550126.1 | porin OmpC | - |
| NBY21_RS25085 (26345) | 26345..26935 | - | 591 | WP_021560312.1 | hypothetical protein | - |
| NBY21_RS25090 (26935) | 26935..27192 | - | 258 | WP_000343099.1 | hypothetical protein | - |
| NBY21_RS25095 (27761) | 27761..28174 | + | 414 | WP_024222968.1 | hypothetical protein | - |
| NBY21_RS25100 (28176) | 28176..28958 | + | 783 | WP_089679257.1 | site-specific integrase | - |
| NBY21_RS25105 (29095) | 29095..29370 | - | 276 | WP_000239529.1 | hypothetical protein | - |
| NBY21_RS25110 (29364) | 29364..30008 | - | 645 | WP_064550114.1 | AAA family ATPase | - |
| NBY21_RS25115 (30237) | 30237..31208 | + | 972 | WP_001103690.1 | plasmid segregation protein ParM | - |
| NBY21_RS25120 (31213) | 31213..31605 | + | 393 | WP_000340830.1 | plasmid partitioning/stability family protein | - |
| NBY21_RS25125 (31610) | 31610..32881 | - | 1272 | WP_064550112.1 | translesion error-prone DNA polymerase V subunit UmuC | - |
| NBY21_RS25130 (32881) | 32881..33318 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| NBY21_RS25135 (33315) | 33315..33563 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| NBY21_RS25140 (33982) | 33982..34884 | + | 903 | WP_122989627.1 | DUF1281 domain-containing protein | - |
| NBY21_RS25145 (34888) | 34888..35193 | + | 306 | WP_032154505.1 | hypothetical protein | - |
| NBY21_RS25150 (35269) | 35269..35952 | + | 684 | WP_000085874.1 | DNA methylase | - |
| NBY21_RS25155 (35953) | 35953..36174 | + | 222 | WP_001104885.1 | hypothetical protein | - |
| NBY21_RS25160 (36155) | 36155..36621 | + | 467 | Protein_43 | DUF1380 family protein | - |
| NBY21_RS25165 (36672) | 36672..37448 | + | 777 | WP_064550132.1 | hypothetical protein | - |
| NBY21_RS25170 (37864) | 37864..38289 | + | 426 | WP_053285755.1 | antirestriction protein | - |
| NBY21_RS25175 (38336) | 38336..38758 | + | 423 | WP_053285754.1 | DUF1380 family protein | - |
| NBY21_RS25180 (38755) | 38755..38946 | + | 192 | WP_053285753.1 | hypothetical protein | - |
| NBY21_RS25185 (39017) | 39017..39331 | + | 315 | WP_249437685.1 | hypothetical protein | - |
| NBY21_RS25190 (39716) | 39716..40243 | + | 528 | WP_053285752.1 | single-stranded DNA-binding protein | - |
| NBY21_RS25195 (40301) | 40301..40534 | + | 234 | WP_000005985.1 | DUF905 family protein | - |
| NBY21_RS25200 (40593) | 40593..42551 | + | 1959 | WP_064550106.1 | ParB/RepB/Spo0J family partition protein | - |
| NBY21_RS25205 (42606) | 42606..43040 | + | 435 | WP_053285758.1 | conjugation system SOS inhibitor PsiB | - |
| NBY21_RS25210 (43037) | 43037..43756 | + | 720 | WP_001276270.1 | plasmid SOS inhibition protein A | - |
| NBY21_RS25215 (43753) | 43753..44349 | + | 597 | WP_053285750.1 | hypothetical protein | - |
| NBY21_RS25220 (44814) | 44814..45314 | + | 501 | WP_053285748.1 | antirestriction protein ArdA | - |
| NBY21_RS25225 (46042) | 46042..46476 | + | 435 | WP_000218863.1 | hypothetical protein | - |
| NBY21_RS25230 (46568) | 46568..46834 | + | 267 | WP_053285747.1 | hypothetical protein | - |
| NBY21_RS25235 (46899) | 46899..47825 | + | 927 | WP_000038402.1 | ISNCY family transposase ISRor2 | VF |
| NBY21_RS25240 (47825) | 47825..48046 | + | 222 | WP_023156788.1 | hypothetical protein | - |
| NBY21_RS25245 (48077) | 48077..48328 | - | 252 | WP_000148279.1 | helix-turn-helix transcriptional regulator | - |
| NBY21_RS25250 (48908) | 48908..49756 | + | 849 | WP_024222946.1 | DUF4942 domain-containing protein | - |
| NBY21_RS25255 (50019) | 50019..50336 | - | 318 | WP_053285746.1 | hypothetical protein | - |
| NBY21_RS25260 (50944) | 50944..51291 | - | 348 | WP_021560361.1 | hypothetical protein | - |
| NBY21_RS25265 (51541) | 51541..51855 | + | 315 | WP_021560360.1 | plasmid mobilization protein MobA | - |
| NBY21_RS25270 (51884) | 51884..54637 | + | 2754 | WP_021560359.1 | hypothetical protein | Relaxase |
| NBY21_RS25275 (54673) | 54673..56994 | - | 2322 | WP_053285745.1 | F-type conjugative transfer protein TrbC | - |
| NBY21_RS25280 (57048) | 57048..57533 | - | 486 | WP_021560357.1 | single-stranded DNA-binding protein | - |
| NBY21_RS25285 (57927) | 57927..58514 | - | 588 | WP_053285744.1 | DUF6012 family protein | - |
| NBY21_RS25290 (58570) | 58570..59781 | - | 1212 | WP_053285743.1 | DsbC family protein | - |
| NBY21_RS25295 (59856) | 59856..61049 | - | 1194 | WP_250840887.1 | hypothetical protein | - |
| NBY21_RS25300 (61065) | 61065..63278 | - | 2214 | WP_021560353.1 | type IA DNA topoisomerase | - |
| - (63457) | 63457..63514 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| - (63457) | 63457..63514 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| - (63457) | 63457..63514 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| - (63457) | 63457..63514 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| NBY21_RS25305 (63569) | 63569..63721 | + | 153 | WP_023156060.1 | Hok/Gef family protein | Toxin Detail |
| NBY21_RS25310 (63793) | 63793..64044 | - | 252 | WP_001685192.1 | hypothetical protein | - |
| NBY21_RS25515 (64359) | 64359..64454 | + | 96 | WP_000609149.1 | DinQ-like type I toxin DqlB | - |
| NBY21_RS25320 (64560) | 64560..65513 | - | 954 | WP_141074322.1 | hypothetical protein | - |
| NBY21_RS25325 (65582) | 65582..67726 | - | 2145 | WP_250840888.1 | DotA/TraY family protein | - |
| NBY21_RS25330 (67761) | 67761..67985 | - | 225 | WP_021560350.1 | hypothetical protein | - |
| NBY21_RS25335 (67988) | 67988..68551 | - | 564 | WP_021560349.1 | conjugal transfer protein TraX | - |
| NBY21_RS25340 (68548) | 68548..69759 | - | 1212 | WP_021560348.1 | conjugal transfer protein TraW | - |
| NBY21_RS25345 (69956) | 69956..73018 | - | 3063 | WP_021560347.1 | hypothetical protein | - |
| NBY21_RS25350 (73018) | 73018..73725 | - | 708 | WP_021560346.1 | hypothetical protein | - |
| NBY21_RS25355 (73738) | 73738..74274 | - | 537 | WP_000906794.1 | Cardiolipin synthase B | VF |
| NBY21_RS25360 (74325) | 74325..74747 | - | 423 | WP_053285741.1 | hypothetical protein | - |
| NBY21_RS25365 (74786) | 74786..75319 | - | 534 | WP_019842546.1 | conjugal transfer protein TraQ | - |
| NBY21_RS25370 (75319) | 75319..76203 | - | 885 | WP_021560345.1 | conjugal transfer protein TraP | - |
| NBY21_RS25375 (76196) | 76196..77491 | - | 1296 | WP_053285740.1 | conjugal transfer protein TraO | - |
| NBY21_RS25380 (77495) | 77495..78442 | - | 948 | WP_019842549.1 | hypothetical protein | VF |
| NBY21_RS25385 (78459) | 78459..79157 | - | 699 | WP_053285739.1 | DotI/IcmL family type IV secretion protein | - |
| NBY21_RS25390 (79165) | 79165..79554 | - | 390 | WP_021560342.1 | hypothetical protein | - |
| NBY21_RS25395 (79611) | 79611..83321 | - | 3711 | WP_250840889.1 | DUF5710 domain-containing protein | - |
| NBY21_RS25400 (83426) | 83426..83713 | - | 288 | WP_021560340.1 | hypothetical protein | - |
| NBY21_RS25405 (83723) | 83723..84880 | - | 1158 | WP_053285737.1 | putative protein YggR | VF |
| NBY21_RS25410 (84880) | 84880..85632 | - | 753 | WP_223168390.1 | hypothetical protein | VF |
| NBY21_RS25415 (85695) | 85695..86144 | - | 450 | WP_021560337.1 | DotD/TraH family lipoprotein | - |
| NBY21_RS25420 (86190) | 86190..86453 | - | 264 | WP_053285736.1 | hypothetical protein | - |
| NBY21_RS25425 (87090) | 87090..88292 | - | 1203 | WP_021560335.1 | conjugal transfer protein TraF | - |
| NBY21_RS25430 (88378) | 88378..89202 | - | 825 | WP_053285735.1 | hypothetical protein | - |
| NBY21_RS25435 (89353) | 89353..90513 | - | 1161 | WP_019842560.1 | site-specific integrase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|