MGE detailed information
MGE type: Conjugative plasmid MGE length: 100768 bp
Accession: NZ_CP098180 Location: 1..100768 Organism: Escherichia coli strain Z0117EC0148 Replicon: plasmid pZ0117EC0148-2
Accession: NZ_CP098180 Location: 1..100768 Organism: Escherichia coli strain Z0117EC0148 Replicon: plasmid pZ0117EC0148-2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NBY28_RS24160 (160) | 160..1713 | + | 1554 | WP_000362206.1 | hypothetical protein | VF |
| NBY28_RS24165 (1726) | 1726..2811 | + | 1086 | WP_001208802.1 | hypothetical protein | VF |
| NBY28_RS24170 (2828) | 2828..3442 | + | 615 | WP_000908227.1 | hypothetical protein | VF |
| NBY28_RS24175 (3452) | 3452..4012 | + | 561 | WP_000014005.1 | hypothetical protein | VF |
| NBY28_RS24180 (3997) | 3997..4653 | + | 657 | WP_001193549.1 | hypothetical protein | VF |
| NBY28_RS24185 (4653) | 4653..5945 | + | 1293 | WP_064198843.1 | hypothetical protein | VF |
| NBY28_RS24190 (6864) | 6864..7217 | - | 354 | WP_001393368.1 | hypothetical protein | - |
| NBY28_RS24195 (7216) | 7216..8370 | + | 1155 | WP_001139955.1 | site-specific integrase | - |
| NBY28_RS24200 (8521) | 8521..9345 | + | 825 | WP_001690630.1 | conjugal transfer protein TraE | - |
| NBY28_RS24205 (9431) | 9431..10633 | + | 1203 | WP_000976353.1 | conjugal transfer protein TraF | - |
| NBY28_RS24210 (10693) | 10693..11298 | + | 606 | WP_064198839.1 | lipopolysaccharide core heptose(II)-phosphate phosphatase | - |
| NBY28_RS24215 (11451) | 11451..12713 | + | 1263 | WP_000608644.1 | IS1380 family transposase ISEcp1 | Transposase |
| NBY28_RS24220 (12963) | 12963..13838 | + | 876 | WP_001617865.1 | Beta-lactamase CTX-M-97 | ARG |
| NBY28_RS24225 (13873) | 13873..14532 | + | 660 | Protein_14 | IS5 family transposase IS903B | Transposase |
| NBY28_RS24230 (14948) | 14948..15406 | + | 459 | WP_001079808.1 | hypothetical protein | VF |
| NBY28_RS24235 (15403) | 15403..16221 | + | 819 | WP_032220737.1 | hypothetical protein | VF |
| NBY28_RS24240 (16218) | 16218..17366 | + | 1149 | WP_001024972.1 | putative protein YggR | VF |
| NBY28_RS24245 (17363) | 17363..17653 | + | 291 | WP_001299214.1 | hypothetical protein | - |
| NBY28_RS24250 (17668) | 17668..18219 | + | 552 | WP_000014586.1 | Phospholipase D | VF |
| NBY28_RS24255 (18309) | 18309..22073 | + | 3765 | WP_064198838.1 | DUF5710 domain-containing protein | - |
| NBY28_RS24260 (22091) | 22091..22438 | + | 348 | WP_001055900.1 | conjugal transfer protein | - |
| NBY28_RS24265 (22435) | 22435..23127 | + | 693 | WP_000138551.1 | DotI/IcmL family type IV secretion protein | - |
| NBY28_RS24270 (23138) | 23138..24121 | + | 984 | WP_001191880.1 | hypothetical protein | VF |
| NBY28_RS24275 (24124) | 24124..25413 | + | 1290 | WP_001271994.1 | conjugal transfer protein TraO | - |
| NBY28_RS24280 (25413) | 25413..26117 | + | 705 | WP_000801920.1 | IncI1-type conjugal transfer protein TraP | - |
| NBY28_RS24285 (26117) | 26117..26644 | + | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| NBY28_RS24290 (26695) | 26695..27099 | + | 405 | WP_000086960.1 | IncI1-type conjugal transfer protein TraR | - |
| NBY28_RS24295 (27163) | 27163..27351 | + | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| NBY28_RS24300 (27335) | 27335..28135 | + | 801 | WP_001164788.1 | IncI1-type conjugal transfer protein TraT | - |
| NBY28_RS24305 (28225) | 28225..31269 | + | 3045 | WP_136360500.1 | IncI1-type conjugal transfer protein TraU | - |
| NBY28_RS24310 (31269) | 31269..31883 | + | 615 | WP_000337399.1 | IncI1-type conjugal transfer protein TraV | - |
| NBY28_RS24315 (31850) | 31850..33052 | + | 1203 | WP_001189156.1 | IncI1-type conjugal transfer protein TraW | - |
| NBY28_RS24320 (33081) | 33081..33665 | + | 585 | WP_001037998.1 | conjugal transfer protein TraX | - |
| NBY28_RS24325 (33762) | 33762..35930 | + | 2169 | WP_000698368.1 | DotA/TraY family protein | - |
| NBY28_RS24330 (36001) | 36001..36663 | + | 663 | WP_060527638.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| NBY28_RS24335 (36761) | 36761..36970 | + | 210 | WP_001140543.1 | hemolysin expression modulator Hha | - |
| NBY28_RS24340 (37179) | 37179..37355 | + | 177 | WP_001054900.1 | hypothetical protein | - |
| - (37841) | 37841..37892 | + | 52 | NuclAT_1 | - | - |
| - (37841) | 37841..37892 | + | 52 | NuclAT_1 | - | - |
| - (37841) | 37841..37892 | + | 52 | NuclAT_1 | - | - |
| - (37841) | 37841..37892 | + | 52 | NuclAT_1 | - | - |
| NBY28_RS24345 (38286) | 38286..38537 | + | 252 | WP_024171163.1 | hypothetical protein | - |
| NBY28_RS24350 (38609) | 38609..38761 | - | 153 | WP_001387489.1 | Hok/Gef family protein | Toxin Detail |
| - (38813) | 38813..38873 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| - (38813) | 38813..38873 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| - (38813) | 38813..38873 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| - (38813) | 38813..38873 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| NBY28_RS24355 (39053) | 39053..40261 | + | 1209 | WP_001493816.1 | IncI1-type conjugal transfer protein TrbA | - |
| NBY28_RS24360 (40280) | 40280..41350 | + | 1071 | WP_136360499.1 | IncI1-type conjugal transfer protein TrbB | - |
| NBY28_RS24365 (41343) | 41343..43634 | + | 2292 | WP_024168876.1 | F-type conjugative transfer protein TrbC | - |
| NBY28_RS24370 (43707) | 43707..44525 | - | 819 | WP_001760750.1 | DUF2971 domain-containing protein | - |
| NBY28_RS24375 (44648) | 44648..47350 | - | 2703 | WP_024168875.1 | hypothetical protein | Relaxase |
| NBY28_RS24380 (47361) | 47361..47693 | - | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| NBY28_RS24385 (47927) | 47927..48262 | + | 336 | WP_000157095.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| NBY28_RS24390 (48347) | 48347..49195 | - | 849 | WP_032220727.1 | DUF4942 domain-containing protein | - |
| NBY28_RS24395 (49775) | 49775..50026 | + | 252 | WP_000148280.1 | helix-turn-helix transcriptional regulator | - |
| NBY28_RS24400 (50060) | 50060..50302 | - | 243 | WP_181201728.1 | hypothetical protein | - |
| NBY28_RS24405 (50302) | 50302..51216 | - | 915 | WP_000038334.1 | ISNCY family transposase ISRor2 | VF |
| NBY28_RS24410 (51281) | 51281..51547 | - | 267 | WP_001247862.1 | hypothetical protein | - |
| NBY28_RS24415 (51641) | 51641..52075 | - | 435 | WP_000218858.1 | hypothetical protein | - |
| NBY28_RS24420 (52319) | 52319..52498 | - | 180 | WP_001760705.1 | hypothetical protein | - |
| NBY28_RS24425 (52803) | 52803..53303 | - | 501 | WP_000117621.1 | antirestriction protein ArdA | - |
| NBY28_RS24430 (53766) | 53766..54362 | - | 597 | WP_130069461.1 | hypothetical protein | - |
| NBY28_RS24435 (54359) | 54359..55078 | - | 720 | WP_001276261.1 | plasmid SOS inhibition protein A | - |
| NBY28_RS24440 (55075) | 55075..55509 | - | 435 | WP_000845897.1 | conjugation system SOS inhibitor PsiB | - |
| NBY28_RS24445 (55564) | 55564..57522 | - | 1959 | WP_250844256.1 | ParB/RepB/Spo0J family partition protein | - |
| NBY28_RS24450 (57581) | 57581..57814 | - | 234 | WP_136360497.1 | DUF905 domain-containing protein | - |
| NBY28_RS24455 (57872) | 57872..58399 | - | 528 | WP_049024300.1 | single-stranded DNA-binding protein | - |
| NBY28_RS24460 (58783) | 58783..59097 | - | 315 | WP_136360496.1 | hypothetical protein | - |
| NBY28_RS24465 (59169) | 59169..59360 | - | 192 | WP_001027516.1 | hypothetical protein | - |
| NBY28_RS24470 (59357) | 59357..59779 | - | 423 | WP_042974081.1 | DUF1380 family protein | - |
| NBY28_RS24475 (59826) | 59826..60251 | - | 426 | WP_065552904.1 | antirestriction protein | - |
| NBY28_RS24480 (60664) | 60664..61434 | - | 771 | WP_089613079.1 | hypothetical protein | - |
| NBY28_RS24485 (61479) | 61479..61913 | - | 435 | WP_136360494.1 | DUF1380 family protein | - |
| NBY28_RS24490 (61927) | 61927..62148 | - | 222 | WP_001104885.1 | hypothetical protein | - |
| NBY28_RS24495 (62149) | 62149..62832 | - | 684 | WP_000086135.1 | DNA methylase | - |
| NBY28_RS24500 (62908) | 62908..63213 | - | 306 | WP_013307862.1 | hypothetical protein | - |
| NBY28_RS24505 (63217) | 63217..64119 | - | 903 | WP_168732881.1 | DUF1281 domain-containing protein | - |
| NBY28_RS24510 (64538) | 64538..64786 | + | 249 | WP_000618110.1 | DinI-like family protein | - |
| NBY28_RS24515 (64783) | 64783..65220 | + | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| NBY28_RS24520 (65220) | 65220..66491 | + | 1272 | WP_136360492.1 | Y-family DNA polymerase | - |
| NBY28_RS24525 (66496) | 66496..66888 | - | 393 | WP_136360491.1 | plasmid partitioning/stability family protein | - |
| NBY28_RS24530 (66893) | 66893..67864 | - | 972 | WP_001103690.1 | plasmid segregation protein ParM | - |
| NBY28_RS24535 (68093) | 68093..68737 | + | 645 | WP_000633913.1 | division plane positioning ATPase MipZ | - |
| NBY28_RS24540 (68731) | 68731..69006 | + | 276 | WP_000239529.1 | hypothetical protein | - |
| NBY28_RS24545 (69144) | 69144..69929 | - | 786 | WP_077249540.1 | site-specific integrase | - |
| NBY28_RS24550 (69974) | 69974..70744 | - | 771 | WP_001499400.1 | hypothetical protein | - |
| NBY28_RS24555 (70806) | 70806..71120 | - | 315 | WP_001302628.1 | hypothetical protein | - |
| NBY28_RS24560 (71690) | 71690..71929 | + | 240 | WP_000371884.1 | hypothetical protein | - |
| NBY28_RS24565 (72119) | 72119..72439 | - | 321 | Protein_82 | ATPase | - |
| NBY28_RS24570 (72497) | 72497..73194 | + | 698 | WP_103215986.1 | IS1 family transposase IS1G | Transposase |
| NBY28_RS24575 (73205) | 73205..74968 | - | 1764 | WP_250844257.1 | DUF87 domain-containing protein | - |
| NBY28_RS24580 (74965) | 74965..76356 | - | 1392 | WP_000085084.1 | SIR2 family protein | - |
| NBY28_RS24585 (76433) | 76433..76957 | - | 525 | WP_050195267.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| NBY28_RS24590 (76982) | 76982..77686 | + | 705 | WP_001067858.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| NBY28_RS24595 (77740) | 77740..77997 | + | 258 | Protein_88 | ISKra4 family transposase ISKpn19 | Transposase |
| NBY28_RS24600 (78388) | 78388..79044 | + | 657 | WP_001516695.1 | Pentapeptide repeat protein | ARG |
| NBY28_RS24605 (79363) | 79363..79791 | - | 429 | Protein_90 | Tn3 family transposase TnpR_ISMex22 | Transposase |
| NBY28_RS24610 (79824) | 79824..81215 | - | 1392 | WP_001493761.1 | ISKra4 family transposase ISKpn19 | Transposase |
| NBY28_RS24615 (81252) | 81252..81602 | - | 351 | WP_020317223.1 | Tn3 family transposase TnpR_ISPa40 | Transposase |
| NBY28_RS24620 (81718) | 81718..81990 | + | 273 | WP_000019163.1 | hypothetical protein | - |
| NBY28_RS24625 (81971) | 81971..83179 | + | 1209 | WP_000198533.1 | IS91 family transposase ISSbo1 | Transposase |
| NBY28_RS24630 (83343) | 83343..83537 | - | 195 | WP_250844258.1 | recombinase family protein | - |
| NBY28_RS24635 (83674) | 83674..84219 | - | 546 | WP_001493763.1 | plasmid pRiA4b ORF-3 family protein | - |
| NBY28_RS24640 (84490) | 84490..85452 | - | 963 | Protein_97 | IS110 family transposase ISEc45 | Transposase |
| NBY28_RS24645 (85763) | 85763..85951 | + | 189 | WP_000957857.1 | hypothetical protein | - |
| NBY28_RS24650 (85961) | 85961..87160 | + | 1200 | WP_000948429.1 | IS91 family transposase ISSbo1 | Transposase |
| NBY28_RS24655 (87335) | 87335..87881 | + | 547 | Protein_100 | transposase | - |
| NBY28_RS24660 (88070) | 88070..88633 | - | 564 | Protein_101 | 3'-5' exonuclease | - |
| NBY28_RS24665 (88679) | 88679..88957 | - | 279 | WP_246777396.1 | type II toxin-antitoxin system toxin YacB | Toxin Detail |
| NBY28_RS24670 (88957) | 88957..89226 | - | 270 | WP_063848275.1 | type II toxin-antitoxin system antitoxin YacA | Antitoxin Detail |
| NBY28_RS24675 (89281) | 89281..89439 | - | 159 | WP_001470858.1 | hypothetical protein | - |
| NBY28_RS24680 (90133) | 90133..91164 | - | 1032 | WP_250844259.1 | plasmid replication initiator RepA | - |
| NBY28_RS24685 (92170) | 92170..92400 | + | 231 | WP_228772074.1 | ash family protein | - |
| NBY28_RS24690 (92318) | 92318..92605 | + | 288 | WP_000074849.1 | conjugal transfer protein TraA | - |
| NBY28_RS24695 (93047) | 93047..93580 | + | 534 | WP_001372168.1 | transcription termination/antitermination NusG family protein | - |
| NBY28_RS24700 (93834) | 93834..94517 | + | 684 | WP_000213863.1 | hypothetical protein | - |
| NBY28_RS24705 (94689) | 94689..94943 | + | 255 | WP_001136187.1 | PilI type IV pilus biogenesis protein | - |
| NBY28_RS24710 (95990) | 95990..97057 | + | 1068 | WP_001360287.1 | hypothetical protein | VF |
| NBY28_RS24715 (97057) | 97057..97494 | + | 438 | WP_000539806.1 | hypothetical protein | VF |
| NBY28_RS24720 (97508) | 97508..99190 | + | 1683 | WP_000748143.1 | hypothetical protein | VF |
| NBY28_RS24725 (99183) | 99183..100478 | + | 1296 | WP_064198841.1 | type 4b pilus protein PilO2 | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|