MGE detailed information
MGE type: Genomic_island MGE length: 33658 bp
Accession: NZ_CP097896 Location: 960820..994477 Organism: Pectobacterium actinidiae strain GX-Pa1 Replicon: chromosome
Accession: NZ_CP097896 Location: 960820..994477 Organism: Pectobacterium actinidiae strain GX-Pa1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| M9782_RS04270 (M9782_04270) | 958820..959200 | + | 381 | WP_225086665.1 | hypothetical protein | - |
| M9782_RS04275 (M9782_04275) | 959246..959470 | - | 225 | WP_275071722.1 | SymE family type I addiction module toxin | - |
| M9782_RS04280 (M9782_04280) | 959445..960833 | + | 1389 | WP_275071723.1 | VENN motif pre-toxin domain-containing protein | - |
| M9782_RS04285 (M9782_04285) | 960820..961092 | + | 273 | WP_263058626.1 | hypothetical protein | - |
| M9782_RS04290 (M9782_04290) | 961148..961294 | + | 147 | WP_159440267.1 | hypothetical protein | - |
| M9782_RS04295 (M9782_04295) | 961554..961799 | + | 246 | WP_275071724.1 | hypothetical protein | - |
| M9782_RS04300 (M9782_04300) | 962076..962726 | - | 651 | WP_225086673.1 | DUF421 domain-containing protein | - |
| M9782_RS04305 (M9782_04305) | 962907..965762 | - | 2856 | WP_275071725.1 | valine--tRNA ligase | - |
| M9782_RS04310 (M9782_04310) | 965775..966224 | - | 450 | WP_039354851.1 | DNA polymerase III subunit chi | - |
| M9782_RS04315 (M9782_04315) | 966293..967804 | - | 1512 | WP_010284628.1 | leucyl aminopeptidase | - |
| M9782_RS04320 (M9782_04320) | 968088..969203 | + | 1116 | WP_275071726.1 | LPS export ABC transporter permease LptF | - |
| M9782_RS04325 (M9782_04325) | 969203..970279 | + | 1077 | WP_039354857.1 | LPS export ABC transporter permease LptG | - |
| M9782_RS04335 (M9782_04335) | 970780..972036 | + | 1257 | WP_275071727.1 | Prophage integrase IntA ; Integrase | Integrase |
| M9782_RS04340 (M9782_04340) | 972422..973606 | + | 1185 | WP_261850145.1 | DUF262 domain-containing protein | - |
| M9782_RS04345 (M9782_04345) | 973608..975230 | + | 1623 | WP_275071728.1 | AAA family ATPase | - |
| M9782_RS04350 (M9782_04350) | 975246..975593 | - | 348 | WP_261850143.1 | DNA sulfur modification protein DndE | - |
| M9782_RS04355 (M9782_04355) | 975593..977590 | - | 1998 | WP_275071729.1 | DNA sulfur modification protein DndD | - |
| M9782_RS04360 (M9782_04360) | 977590..979218 | - | 1629 | WP_261850141.1 | DNA phosphorothioation system sulfurtransferase DndC | - |
| M9782_RS04365 (M9782_04365) | 979215..980300 | - | 1086 | WP_261850140.1 | DNA sulfur modification protein DndB | - |
| M9782_RS04370 (M9782_04370) | 980677..980886 | - | 210 | WP_261850139.1 | AlpA family transcriptional regulator | - |
| M9782_RS04375 (M9782_04375) | 981069..981605 | - | 537 | WP_261850147.1 | inovirus Gp2 family protein | - |
| M9782_RS04380 (M9782_04380) | 982440..983288 | + | 849 | WP_275071730.1 | hypothetical protein | - |
| M9782_RS04385 (M9782_04385) | 983371..984246 | + | 876 | WP_275071731.1 | 50S ribosome-binding GTPase | - |
| M9782_RS04390 (M9782_04390) | 984545..985099 | + | 555 | WP_275071732.1 | hypothetical protein | - |
| M9782_RS04395 (M9782_04395) | 985128..985733 | + | 606 | WP_261850135.1 | hypothetical protein | - |
| M9782_RS04400 (M9782_04400) | 985940..986413 | + | 474 | WP_261850134.1 | DNA repair protein RadC | - |
| M9782_RS04405 (M9782_04405) | 986438..986774 | + | 337 | Protein_849 | type IV toxin-antitoxin system YeeU family antitoxin | - |
| M9782_RS04410 (M9782_04410) | 986844..987164 | + | 321 | WP_275071733.1 | TA system toxin CbtA family protein | - |
| M9782_RS04415 (M9782_04415) | 987282..988115 | + | 834 | WP_261850159.1 | DUF4942 domain-containing protein | - |
| M9782_RS04420 (M9782_04420) | 988225..988467 | + | 243 | WP_261850158.1 | ribbon-helix-helix domain-containing protein | - |
| M9782_RS04425 (M9782_04425) | 988640..989035 | + | 396 | WP_261850157.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | Antitoxin Detail |
| M9782_RS04430 (M9782_04430) | 989028..989975 | + | 948 | WP_261850156.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | Toxin Detail |
| M9782_RS04435 (M9782_04435) | 990365..991228 | + | 864 | Protein_855 | Prophage integrase IntA ; Integrase | Integrase |
| M9782_RS04440 (M9782_04440) | 991295..991426 | + | 132 | Protein_856 | CopG family transcriptional regulator | - |
| M9782_RS04445 (M9782_04445) | 991732..992037 | + | 306 | WP_015848020.1 | helix-turn-helix transcriptional regulator | Antitoxin Detail |
| M9782_RS04450 (M9782_04450) | 992042..993376 | + | 1335 | WP_275071734.1 | type II toxin-antitoxin system HipA family toxin | Toxin Detail |
| M9782_RS04455 (M9782_04455) | 993653..993775 | - | 123 | Protein_859 | transcriptional regulator | - |
| M9782_RS04460 (M9782_04460) | 994049..994477 | + | 429 | WP_275071735.1 | GNAT family N-acetyltransferase | - |
| M9782_RS04465 (M9782_04465) | 994568..995689 | + | 1122 | WP_275071736.1 | cupin domain-containing protein | - |
| M9782_RS04470 (M9782_04470) | 995987..997132 | + | 1146 | WP_275071737.1 | alpha/beta hydrolase | - |
| M9782_RS04475 (M9782_04475) | 997163..998353 | - | 1191 | WP_275071738.1 | ABC transporter permease | - |
| M9782_RS04480 (M9782_04480) | 998347..999462 | - | 1116 | WP_275071739.1 | ABC transporter permease | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|