MGE detailed information
MGE type: Prophage MGE length: 13684 bp
Accession: NZ_CP097840 Location: 3204315..3217998 Organism: Shigella flexneri strain A Replicon: chromosome
Accession: NZ_CP097840 Location: 3204315..3217998 Organism: Shigella flexneri strain A Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| M9382_RS15790 (3200828) | 3200828..3201574 | + | 747 | WP_005050098.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
| M9382_RS15795 (3201663) | 3201663..3202349 | + | 687 | WP_000215549.1 | DNA-binding transcriptional regulator rspR | - |
| M9382_RS15800 (3202527) | 3202527..3202730 | + | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| M9382_RS15805 (3202766) | 3202766..3204226 | - | 1461 | WP_000527804.1 | mannitol dehydrogenase family protein | - |
| M9382_RS15810 (3204315) | 3204315..3205334 | - | 1020 | Protein_3073 | MHS family MFS transporter YdfJ | - |
| M9382_RS15815 (3205396) | 3205396..3206552 | + | 1157 | WP_094081493.1 | IS3 family transposase IS600 | Transposase |
| M9382_RS15820 (3206577) | 3206577..3206756 | - | 180 | WP_000372594.1 | class II holin family protein | - |
| M9382_RS15825 (3206906) | 3206906..3207067 | - | 162 | WP_001323614.1 | hypothetical protein | - |
| M9382_RS15830 (3207067) | 3207067..3207252 | - | 186 | Protein_3077 | DUF1737 domain-containing protein | - |
| M9382_RS15835 (3207512) | 3207512..3207847 | + | 336 | WP_000871291.1 | anti-adapter protein IraM | - |
| M9382_RS15840 (3208128) | 3208128..3208236 | - | 109 | Protein_3079 | DUF3927 family protein | - |
| M9382_RS15855 (3209157) | 3209157..3209978 | - | 822 | WP_000762884.1 | antitermination protein | - |
| M9382_RS15860 (3209993) | 3209993..3210349 | - | 357 | WP_000904111.1 | RusA family crossover junction endodeoxyribonuclease | - |
| M9382_RS15865 (3210362) | 3210362..3211411 | - | 1050 | WP_001265249.1 | DUF968 domain-containing protein | - |
| M9382_RS15870 (3211413) | 3211413..3211691 | - | 279 | Protein_3083 | hypothetical protein | - |
| M9382_RS15875 (3211794) | 3211794..3212009 | - | 216 | WP_000980986.1 | hypothetical protein | - |
| M9382_RS15880 (3212227) | 3212227..3212382 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| M9382_RS15885 (3212454) | 3212454..3212741 | - | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| M9382_RS15890 (3212741) | 3212741..3212980 | - | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| M9382_RS15895 (3213005) | 3213005..3213310 | + | 306 | WP_071818640.1 | hypothetical protein | - |
| M9382_RS15900 (3213307) | 3213307..3214185 | - | 879 | Protein_3089 | IS3 family transposase ISSd1 | Transposase |
| M9382_RS15910 (3214957) | 3214957..3215385 | + | 429 | Protein_3091 | Type 1 fimbrin D-mannose specific adhesin | VF |
| M9382_RS15915 (3215719) | 3215719..3217998 | + | 2280 | WP_000726665.1 | acid resistance putative oxidoreductase YdeP | - |
| M9382_RS15920 (3218246) | 3218246..3218449 | + | 204 | WP_000543383.1 | two-component system connector SafA | - |
| M9382_RS15925 (3218517) | 3218517..3219278 | + | 762 | WP_000060475.1 | acid stress response transcriptional regulator YdeO | - |
| M9382_RS15930 (3219680) | 3219680..3219826 | + | 147 | Protein_3095 | sulfatase | - |
| M9382_RS15940 (3220593) | 3220593..3221072 | - | 480 | Protein_3097 | cupin domain-containing protein | - |
| M9382_RS15945 (3221388) | 3221388..3222152 | + | 765 | WP_000692136.1 | electron transfer flavoprotein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Shigella flexneri 5a str. M90T | Prophage | TA120372 | NZ_CP037923 | 1629251..1643278 | 0.003 |