MGE detailed information
MGE type: Prophage MGE length: 13684 bp
Accession: NZ_CP097837 Location: 2075828..2089511 Organism: Shigella flexneri strain B Replicon: chromosome
Accession: NZ_CP097837 Location: 2075828..2089511 Organism: Shigella flexneri strain B Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| M9380_RS10475 (2071674) | 2071674..2072438 | - | 765 | WP_000692136.1 | electron transfer flavoprotein | - |
| M9380_RS10480 (2072754) | 2072754..2073233 | + | 480 | Protein_2034 | cupin domain-containing protein | - |
| M9380_RS10485 (2073288) | 2073288..2073985 | + | 698 | WP_223368647.1 | IS1 family transposase | - |
| M9380_RS10490 (2073979) | 2073979..2074146 | - | 168 | WP_005062520.1 | hypothetical protein | - |
| M9380_RS10495 (2074548) | 2074548..2075309 | - | 762 | WP_000060475.1 | acid stress response transcriptional regulator YdeO | - |
| M9380_RS10500 (2075377) | 2075377..2075580 | - | 204 | WP_000543383.1 | two-component system connector SafA | - |
| M9380_RS10505 (2075828) | 2075828..2078107 | - | 2280 | WP_000726665.1 | acid resistance putative oxidoreductase YdeP | - |
| M9380_RS10510 (2078441) | 2078441..2078869 | - | 429 | Protein_2040 | Type 1 fimbrin D-mannose specific adhesin | VF |
| M9380_RS10515 (2078926) | 2078926..2079623 | + | 698 | WP_232046037.1 | IS1 family transposase IS1X2 | Transposase |
| M9380_RS10520 (2079641) | 2079641..2080519 | + | 879 | Protein_2042 | IS3 family transposase ISSd1 | Transposase |
| M9380_RS10525 (2080516) | 2080516..2080821 | - | 306 | WP_071818640.1 | hypothetical protein | - |
| M9380_RS10530 (2080846) | 2080846..2081085 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| M9380_RS10535 (2081085) | 2081085..2081372 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| M9380_RS10540 (2081444) | 2081444..2081599 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| M9380_RS10545 (2081817) | 2081817..2082032 | + | 216 | WP_000980986.1 | hypothetical protein | - |
| M9380_RS10550 (2082135) | 2082135..2082413 | + | 279 | Protein_2048 | hypothetical protein | - |
| M9380_RS10555 (2082415) | 2082415..2083464 | + | 1050 | WP_001265249.1 | DUF968 domain-containing protein | - |
| M9380_RS10560 (2083477) | 2083477..2083833 | + | 357 | WP_000904111.1 | RusA family crossover junction endodeoxyribonuclease | - |
| M9380_RS10565 (2083848) | 2083848..2084669 | + | 822 | WP_000762884.1 | antitermination protein | - |
| M9380_RS10580 (2085590) | 2085590..2085698 | + | 109 | Protein_2052 | DUF3927 family protein | - |
| M9380_RS10585 (2085979) | 2085979..2086314 | - | 336 | WP_000871291.1 | anti-adapter protein IraM | - |
| M9380_RS10590 (2086574) | 2086574..2086759 | + | 186 | Protein_2054 | DUF1737 domain-containing protein | - |
| M9380_RS10595 (2086759) | 2086759..2086920 | + | 162 | WP_001323614.1 | hypothetical protein | - |
| M9380_RS10600 (2087070) | 2087070..2087249 | + | 180 | WP_000372594.1 | class II holin family protein | - |
| M9380_RS10610 (2088492) | 2088492..2089511 | + | 1020 | Protein_2058 | MHS family MFS transporter YdfJ | - |
| M9380_RS10615 (2089600) | 2089600..2091060 | + | 1461 | WP_000527804.1 | mannitol dehydrogenase family protein | - |
| M9380_RS10620 (2091096) | 2091096..2091299 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| M9380_RS10625 (2091477) | 2091477..2092163 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator rspR | - |
| M9380_RS10630 (2092252) | 2092252..2092998 | - | 747 | WP_005050098.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Shigella flexneri 5a str. M90T | Prophage | TA120372 | NZ_CP037923 | 1629251..1643278 | 0.003 |