MGE detailed information
MGE type: IScluster/Tn MGE length: 21718 bp
Accession: NZ_CP097836 Location: 6495..28212 Organism: Shigella flexneri strain C Replicon: plasmid unnamed2
Accession: NZ_CP097836 Location: 6495..28212 Organism: Shigella flexneri strain C Replicon: plasmid unnamed2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| M9379_RS23190 (M9379_23195) | 1581..2423 | - | 843 | WP_000931197.1 | polysaccharide deacetylase family protein | - |
| M9379_RS23195 (M9379_23200) | 2906..5817 | + | 2912 | Protein_3 | ankyrin repeat domain-containing protein | - |
| M9379_RS23200 (M9379_23205) | 5847..6171 | - | 325 | Protein_4 | IS3 family transposase | - |
| M9379_RS23205 (M9379_23210) | 6169..6360 | + | 192 | Protein_5 | IS66 family insertion sequence element accessory protein TnpB | - |
| M9379_RS23210 (M9379_23215) | 6374..6454 | - | 81 | Protein_6 | hypothetical protein | - |
| M9379_RS23215 (M9379_23220) | 6495..7704 | - | 1210 | Protein_7 | IS3 family transposase | - |
| M9379_RS23220 (M9379_23225) | 7761..9029 | - | 1269 | Protein_8 | IS4 family transposase IS4 | Transposase |
| M9379_RS23225 (M9379_23230) | 9092..9358 | - | 267 | Protein_9 | IS66 family transposase ISCro1 | Transposase |
| M9379_RS23230 (M9379_23235) | 9715..10305 | - | 591 | WP_000705601.1 | Protein kinase OspG | VF |
| M9379_RS23235 (M9379_23240) | 10388..10557 | - | 170 | Protein_11 | type II toxin-antitoxin system toxin YacB | - |
| M9379_RS23240 (M9379_23245) | 10557..10826 | - | 270 | Protein_12 | type II toxin-antitoxin system antitoxin YacA | - |
| M9379_RS23245 (M9379_23250) | 11034..12671 | - | 1638 | WP_000936806.1 | E3 ubiquitin-protein ligase ipaH9.8 | VF |
| M9379_RS23250 (M9379_23255) | 12933..13040 | - | 108 | WP_023592908.1 | transposase domain-containing protein | - |
| M9379_RS23255 (M9379_23260) | 13064..13369 | - | 306 | WP_001159860.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| M9379_RS23260 (M9379_23265) | 13371..13589 | - | 219 | WP_000813626.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| M9379_RS23265 (M9379_23270) | 14125..15078 | - | 954 | Protein_17 | IS66 family transposase ISEc49 | Transposase |
| M9379_RS23270 (M9379_23275) | 15134..15831 | + | 698 | WP_223368647.1 | IS1 family transposase IS1X2 | Transposase |
| M9379_RS23275 (M9379_23280) | 16057..16332 | - | 276 | WP_000421262.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| M9379_RS23280 (M9379_23285) | 16332..16616 | - | 285 | WP_024260696.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| M9379_RS23285 (M9379_23290) | 17370..17579 | + | 210 | Protein_21 | peptidoglycan-binding protein | - |
| M9379_RS23290 (M9379_23295) | 17679..17864 | - | 186 | Protein_22 | IS21 family transposase IS100 | Transposase |
| M9379_RS23295 (M9379_23300) | 18053..19654 | - | 1602 | WP_134797205.1 | IS66 family transposase ISSfl3 | Transposase |
| M9379_RS23300 (M9379_23305) | 19651..20001 | - | 351 | WP_005061851.1 | IS66 family transposase ISSfl3 | Transposase |
| M9379_RS23305 (M9379_23310) | 19998..20672 | - | 675 | WP_004967157.1 | IS66 family transposase ISSfl3 | Transposase |
| M9379_RS23310 (M9379_23315) | 20749..21790 | - | 1042 | Protein_26 | IS3 family transposase IS2 | Transposase |
| M9379_RS23315 (M9379_23320) | 21878..22147 | - | 270 | Protein_27 | IS3 family transposase ISEc48 | Transposase |
| M9379_RS23320 (M9379_23325) | 22262..22900 | - | 639 | WP_000607008.1 | hypothetical protein | VF |
| M9379_RS23325 (M9379_23330) | 23059..23529 | - | 471 | Protein_29 | IS1 family transposase IS1N | Transposase |
| M9379_RS23330 (M9379_23335) | 23728..24402 | + | 675 | WP_004967157.1 | IS66 family transposase ISSfl3 | Transposase |
| M9379_RS23335 (M9379_23340) | 24399..24749 | + | 351 | WP_005048975.1 | IS66 family transposase ISSfl3 | Transposase |
| M9379_RS23340 (M9379_23345) | 24746..25297 | + | 552 | Protein_32 | IS66 family transposase ISSfl3 | Transposase |
| M9379_RS23345 (M9379_23350) | 25355..26511 | + | 1157 | WP_252997053.1 | IS3 family transposase IS600 | Transposase |
| M9379_RS23350 (M9379_23355) | 26555..27484 | + | 930 | Protein_34 | IS66 family transposase ISSfl3 | Transposase |
| M9379_RS23355 (M9379_23360) | 27493..28212 | + | 720 | Protein_35 | IS110 family transposase ISSfl8 | Transposase |
| M9379_RS23360 (M9379_23365) | 28551..29321 | - | 771 | WP_001006196.1 | hypothetical protein | - |
| M9379_RS23365 (M9379_23370) | 29366..29852 | - | 487 | Protein_37 | DUF1380 family protein | - |
| M9379_RS23370 (M9379_23375) | 29812..30033 | - | 222 | WP_001104887.1 | hypothetical protein | - |
| M9379_RS23375 (M9379_23380) | 30034..30717 | - | 684 | WP_000086135.1 | DNA methylase | - |
| M9379_RS23380 (M9379_23385) | 30781..31092 | - | 312 | WP_031942478.1 | hypothetical protein | - |
| M9379_RS23385 (M9379_23390) | 31089..31991 | - | 903 | WP_128567749.1 | DUF1281 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|