MGE detailed information
MGE type: Conjugative plasmid MGE length: 117915 bp
Accession: NZ_CP097728 Location: 1..117915 Organism: Escherichia coli strain MS1050 Replicon: plasmid pMS1050-2
Accession: NZ_CP097728 Location: 1..117915 Organism: Escherichia coli strain MS1050 Replicon: plasmid pMS1050-2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| M9O78_RS24855 (1) | 1..282 | + | 282 | WP_204362090.1 | hypothetical protein | - |
| M9O78_RS24860 (600) | 600..1754 | + | 1155 | WP_251792703.1 | site-specific integrase | - |
| M9O78_RS24865 (1905) | 1905..2729 | + | 825 | WP_001238939.1 | conjugal transfer protein TraE | - |
| M9O78_RS24870 (2814) | 2814..4016 | + | 1203 | WP_267327067.1 | conjugal transfer protein TraF | - |
| M9O78_RS24875 (4076) | 4076..4660 | + | 585 | WP_000977522.1 | histidine phosphatase family protein | - |
| M9O78_RS24880 (5055) | 5055..5513 | + | 459 | WP_001079808.1 | hypothetical protein | VF |
| M9O78_RS24885 (5510) | 5510..6328 | + | 819 | WP_000646098.1 | hypothetical protein | VF |
| M9O78_RS24890 (6325) | 6325..7473 | + | 1149 | WP_001024972.1 | putative protein YggR | VF |
| M9O78_RS24895 (7470) | 7470..7760 | + | 291 | WP_001299214.1 | hypothetical protein | - |
| M9O78_RS24900 (7775) | 7775..8326 | + | 552 | WP_000014583.1 | Phospholipase D | VF |
| M9O78_RS24905 (8416) | 8416..12183 | + | 3768 | WP_001141529.1 | DUF5710 domain-containing protein | - |
| M9O78_RS24910 (12201) | 12201..12548 | + | 348 | WP_001055900.1 | conjugal transfer protein | - |
| M9O78_RS24915 (12545) | 12545..13237 | + | 693 | WP_000138548.1 | DotI/IcmL family type IV secretion protein | - |
| M9O78_RS24920 (13248) | 13248..14231 | + | 984 | WP_001191877.1 | hypothetical protein | VF |
| M9O78_RS24925 (14234) | 14234..15523 | + | 1290 | WP_001272005.1 | conjugal transfer protein TraO | - |
| M9O78_RS24930 (15523) | 15523..16227 | + | 705 | WP_000801920.1 | IncI1-type conjugal transfer protein TraP | - |
| M9O78_RS24935 (16227) | 16227..16754 | + | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| M9O78_RS24940 (16805) | 16805..17209 | + | 405 | WP_000086957.1 | IncI1-type conjugal transfer protein TraR | - |
| M9O78_RS24945 (17273) | 17273..17461 | + | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| M9O78_RS24950 (17445) | 17445..18245 | + | 801 | WP_001164788.1 | IncI1-type conjugal transfer protein TraT | - |
| M9O78_RS24955 (18335) | 18335..21379 | + | 3045 | WP_001024780.1 | IncI1-type conjugal transfer protein TraU | - |
| M9O78_RS24960 (21379) | 21379..21993 | + | 615 | WP_000337398.1 | IncI1-type conjugal transfer protein TraV | - |
| M9O78_RS24965 (21960) | 21960..23162 | + | 1203 | WP_001189160.1 | IncI1-type conjugal transfer protein TraW | - |
| M9O78_RS24970 (23191) | 23191..23775 | + | 585 | WP_001037987.1 | IncI1-type conjugal transfer protein TraX | - |
| M9O78_RS24975 (23872) | 23872..26034 | + | 2163 | WP_000698351.1 | DotA/TraY family protein | - |
| M9O78_RS24980 (26099) | 26099..26761 | + | 663 | WP_000653334.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| M9O78_RS24985 (26833) | 26833..27042 | - | 210 | WP_000062603.1 | HEAT repeat domain-containing protein | - |
| M9O78_RS24990 (27434) | 27434..27610 | + | 177 | WP_001054904.1 | hypothetical protein | - |
| M9O78_RS24995 (27675) | 27675..27971 | - | 297 | WP_001275298.1 | DinQ-like type I toxin DqlB | - |
| M9O78_RS25000 (28594) | 28594..28746 | - | 153 | WP_001331364.1 | Hok/Gef family protein | Toxin Detail |
| - (28801) | 28801..28858 | + | 58 | NuclAT_0 | - | Antitoxin Detail |
| - (28801) | 28801..28858 | + | 58 | NuclAT_0 | - | Antitoxin Detail |
| - (28801) | 28801..28858 | + | 58 | NuclAT_0 | - | Antitoxin Detail |
| - (28801) | 28801..28858 | + | 58 | NuclAT_0 | - | Antitoxin Detail |
| M9O78_RS25005 (29038) | 29038..30246 | + | 1209 | WP_000121274.1 | IncI1-type conjugal transfer protein TrbA | - |
| M9O78_RS25010 (30265) | 30265..31335 | + | 1071 | WP_000151583.1 | IncI1-type conjugal transfer protein TrbB | - |
| M9O78_RS25015 (31328) | 31328..33619 | + | 2292 | WP_001289276.1 | F-type conjugative transfer protein TrbC | - |
| M9O78_RS25020 (33656) | 33656..36355 | - | 2700 | WP_001354015.1 | hypothetical protein | Relaxase |
| M9O78_RS25025 (36366) | 36366..36698 | - | 333 | WP_001281051.1 | plasmid mobilization protein MobA | - |
| M9O78_RS25030 (36931) | 36931..37266 | + | 336 | WP_000157095.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| M9O78_RS25035 (37352) | 37352..38200 | - | 849 | WP_001077023.1 | DUF4942 domain-containing protein | - |
| M9O78_RS25040 (38780) | 38780..39031 | + | 252 | WP_000148285.1 | helix-turn-helix transcriptional regulator | - |
| M9O78_RS25045 (39062) | 39062..39259 | - | 198 | WP_001348086.1 | hypothetical protein | - |
| M9O78_RS25050 (39282) | 39282..40220 | - | 939 | WP_000078704.1 | ISNCY family transposase ISRor2 | VF |
| M9O78_RS25055 (40285) | 40285..40551 | - | 267 | WP_001247862.1 | hypothetical protein | - |
| M9O78_RS25060 (40645) | 40645..41079 | - | 435 | WP_000218863.1 | hypothetical protein | - |
| M9O78_RS25065 (41808) | 41808..42308 | - | 501 | WP_000117611.1 | antirestriction protein ArdA | - |
| M9O78_RS25070 (42770) | 42770..43366 | - | 597 | WP_000977997.1 | hypothetical protein | - |
| M9O78_RS25075 (43363) | 43363..44082 | - | 720 | WP_001276270.1 | plasmid SOS inhibition protein A | - |
| M9O78_RS25080 (44079) | 44079..44513 | - | 435 | WP_001387500.1 | conjugation system SOS inhibitor PsiB | - |
| M9O78_RS25085 (44568) | 44568..46526 | - | 1959 | WP_267327068.1 | ParB/RepB/Spo0J family partition protein | - |
| M9O78_RS25090 (46585) | 46585..46818 | - | 234 | WP_000006020.1 | DUF905 domain-containing protein | - |
| M9O78_RS25095 (46876) | 46876..47403 | - | 528 | WP_001276120.1 | single-stranded DNA-binding protein | - |
| M9O78_RS25100 (47787) | 47787..48101 | - | 315 | WP_001434357.1 | hypothetical protein | - |
| M9O78_RS25105 (48172) | 48172..48363 | - | 192 | WP_001027495.1 | hypothetical protein | - |
| M9O78_RS25110 (48360) | 48360..48782 | - | 423 | WP_000271705.1 | DUF1380 family protein | - |
| M9O78_RS25115 (48829) | 48829..49254 | - | 426 | WP_001198939.1 | antirestriction protein | - |
| M9O78_RS25120 (49672) | 49672..50448 | - | 777 | WP_001005043.1 | hypothetical protein | - |
| M9O78_RS25125 (50494) | 50494..50928 | - | 435 | WP_000274500.1 | DUF1380 family protein | - |
| M9O78_RS25130 (50942) | 50942..51163 | - | 222 | WP_001104881.1 | hypothetical protein | - |
| M9O78_RS25135 (51164) | 51164..51847 | - | 684 | WP_000086147.1 | DNA methylase | - |
| M9O78_RS25140 (51923) | 51923..52228 | - | 306 | WP_001348080.1 | hypothetical protein | - |
| M9O78_RS25145 (52232) | 52232..53134 | - | 903 | WP_001348079.1 | DUF1281 domain-containing protein | - |
| M9O78_RS25150 (53815) | 53815..54207 | - | 393 | WP_000272884.1 | plasmid partitioning/stability family protein | - |
| M9O78_RS25155 (54211) | 54211..55185 | - | 975 | WP_001217836.1 | plasmid segregation protein ParM | - |
| M9O78_RS25160 (55424) | 55424..55798 | - | 375 | WP_000752652.1 | hypothetical protein | - |
| M9O78_RS25165 (55798) | 55798..56430 | - | 633 | WP_000312331.1 | ParA family protein | - |
| M9O78_RS25170 (57014) | 57014..57799 | - | 786 | WP_001164192.1 | site-specific integrase | - |
| M9O78_RS25175 (57801) | 57801..58214 | - | 414 | WP_000465034.1 | hypothetical protein | - |
| M9O78_RS25180 (58783) | 58783..59043 | + | 261 | WP_000343102.1 | hypothetical protein | - |
| M9O78_RS25185 (59040) | 59040..59630 | + | 591 | WP_000194561.1 | hypothetical protein | - |
| M9O78_RS25190 (59648) | 59648..59995 | - | 348 | WP_000142424.1 | DUF6404 family protein | - |
| M9O78_RS25195 (60114) | 60114..60461 | + | 348 | WP_000762580.1 | colicin E1 family microcin immunity protein | - |
| M9O78_RS25200 (60479) | 60479..62359 | - | 1881 | WP_001283356.1 | colicin Ia central receptor-binding domain-containing protein | - |
| M9O78_RS25205 (62638) | 62638..63984 | - | 1347 | WP_001132019.1 | protein YagA | - |
| M9O78_RS25210 (64338) | 64338..64940 | + | 603 | WP_000517689.1 | ProQ/FINO family protein | - |
| M9O78_RS25215 (64996) | 64996..65490 | + | 495 | WP_001442119.1 | hypothetical protein | - |
| M9O78_RS25220 (65490) | 65490..65756 | + | 267 | WP_000627831.1 | hypothetical protein | - |
| M9O78_RS25225 (66233) | 66233..66724 | - | 492 | WP_000068661.1 | hypothetical protein | - |
| M9O78_RS25230 (66658) | 66658..69624 | - | 2967 | WP_001138064.1 | Tn3 family transposase TnpA_TnAs3 | Transposase |
| M9O78_RS25235 (69627) | 69627..70187 | - | 561 | WP_000147567.1 | Tn3 family transposase TnpR_TnAs3 | Transposase |
| M9O78_RS25240 (70313) | 70313..70663 | - | 351 | WP_000454193.1 | DUF3330 domain-containing protein | - |
| M9O78_RS25245 (70866) | 70866..71879 | - | 1014 | WP_000845048.1 | IS91 family transposase ISAzo26 | Transposase |
| M9O78_RS25250 (72028) | 72028..72866 | + | 839 | Protein_79 | Streptomycin 3''-adenylyltransferase | ARG |
| M9O78_RS25255 (72986) | 72986..73885 | + | 900 | WP_000131886.1 | SPbeta prophage-derived aminoglycoside N(3')-acetyltransferase-like protein YokD | ARG |
| M9O78_RS25260 (74092) | 74092..74412 | + | 321 | WP_000535481.1 | co-chaperone GroES | - |
| M9O78_RS25265 (74468) | 74468..76105 | + | 1638 | WP_000719078.1 | chaperonin GroEL | - |
| M9O78_RS25270 (76330) | 76330..77823 | + | 1494 | WP_042038115.1 | IS91 family transposase | - |
| M9O78_RS25275 (78091) | 78091..79326 | + | 1236 | WP_001137513.1 | IS256-like element ISEc58 family transposase | - |
| M9O78_RS25280 (79544) | 79544..79891 | + | 348 | WP_000679427.1 | Multidrug transporter EmrE | ARG |
| M9O78_RS25285 (79885) | 79885..80724 | + | 840 | WP_000259031.1 | Dihydropteroate synthase | ARG |
| M9O78_RS25290 (80852) | 80852..81352 | + | 501 | WP_000376623.1 | GNAT family N-acetyltransferase | - |
| M9O78_RS25295 (81528) | 81528..82310 | - | 783 | WP_052913056.1 | IS21 family transposase IS1326 | Transposase |
| M9O78_RS25300 (82300) | 82300..83823 | - | 1524 | WP_001324342.1 | IS21 family transposase IS1326 | Transposase |
| M9O78_RS25305 (83925) | 83925..84785 | - | 861 | WP_267327069.1 | TniB family NTP-binding protein | - |
| M9O78_RS25310 (84788) | 84788..86467 | - | 1680 | WP_000179844.1 | DDE-type integrase/transposase/recombinase | - |
| M9O78_RS25315 (86542) | 86542..87210 | - | 669 | WP_001300294.1 | putative signaling protein | VF |
| M9O78_RS25320 (87246) | 87246..87482 | - | 237 | WP_000993386.1 | broad-spectrum mercury transporter MerE | - |
| M9O78_RS25325 (87479) | 87479..87841 | - | 363 | WP_001277456.1 | mercury resistance co-regulator MerD | - |
| M9O78_RS25330 (87859) | 87859..89553 | - | 1695 | WP_000105636.1 | mercury(II) reductase | - |
| M9O78_RS25335 (89605) | 89605..90027 | - | 423 | WP_001340589.1 | organomercurial transporter MerC | - |
| M9O78_RS25340 (90063) | 90063..90338 | - | 276 | WP_000732292.1 | mercury resistance system periplasmic binding protein MerP | - |
| M9O78_RS25345 (90352) | 90352..90702 | - | 351 | WP_001294663.1 | mercuric transport protein MerT | - |
| M9O78_RS25350 (90774) | 90774..91208 | + | 435 | WP_000429836.1 | IS607 family transposase ISChh1 | Transposase |
| M9O78_RS25355 (92211) | 92211..92453 | + | 243 | WP_000844627.1 | transposase | - |
| M9O78_RS25360 (92485) | 92485..93135 | - | 651 | WP_000164043.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| M9O78_RS25365 (93241) | 93241..94440 | + | 1200 | WP_000804064.1 | Tetracycline resistance protein, class C | ARG |
| M9O78_RS25370 (94472) | 94472..95332 | - | 861 | WP_000493383.1 | EamA family transporter | - |
| M9O78_RS25375 (95341) | 95341..95955 | - | 615 | Protein_104 | helix-turn-helix domain-containing protein | - |
| M9O78_RS25380 (95950) | 95950..96075 | + | 126 | Protein_105 | MerR family transcriptional regulator | - |
| M9O78_RS25385 (96312) | 96312..97160 | - | 849 | WP_001057996.1 | 3'-5' exonuclease | - |
| M9O78_RS25390 (97200) | 97200..97478 | - | 279 | WP_001384452.1 | type II toxin-antitoxin system toxin YacB | Toxin Detail |
| M9O78_RS25395 (97478) | 97478..97747 | - | 270 | WP_000079928.1 | type II toxin-antitoxin system antitoxin YacA | Antitoxin Detail |
| M9O78_RS25400 (97802) | 97802..97960 | - | 159 | WP_000841008.1 | hypothetical protein | - |
| M9O78_RS25405 (98656) | 98656..99687 | - | 1032 | WP_000907875.1 | plasmid replication initiator RepA | - |
| M9O78_RS25410 (100645) | 100645..100923 | + | 279 | WP_219065241.1 | ash family protein | - |
| M9O78_RS25415 (100841) | 100841..101128 | + | 288 | WP_000074849.1 | conjugal transfer protein TraA | - |
| M9O78_RS25420 (101570) | 101570..102103 | + | 534 | WP_001303319.1 | transcription termination/antitermination NusG family protein | - |
| M9O78_RS25425 (102357) | 102357..103040 | + | 684 | WP_000213857.1 | conjugal transfer protein TraC | - |
| M9O78_RS25430 (103054) | 103054..103620 | + | 567 | WP_000776428.1 | protein TraD | - |
| M9O78_RS25435 (103888) | 103888..104142 | + | 255 | WP_001136192.1 | PilI type IV pilus biogenesis protein | - |
| M9O78_RS25440 (104185) | 104185..104637 | + | 453 | WP_000008893.1 | hypothetical protein | - |
| M9O78_RS25445 (105311) | 105311..106378 | + | 1068 | WP_000742600.1 | hypothetical protein | VF |
| M9O78_RS25450 (106378) | 106378..106815 | + | 438 | WP_000539807.1 | hypothetical protein | VF |
| M9O78_RS25455 (106829) | 106829..108511 | + | 1683 | WP_000748143.1 | hypothetical protein | VF |
| M9O78_RS25460 (108504) | 108504..109799 | + | 1296 | WP_000752774.1 | type 4b pilus protein PilO2 | - |
| M9O78_RS25465 (109786) | 109786..110238 | + | 453 | WP_001247336.1 | hypothetical protein | VF |
| M9O78_RS25470 (110249) | 110249..111802 | + | 1554 | WP_000362202.1 | hypothetical protein | VF |
| M9O78_RS25475 (111815) | 111815..112912 | + | 1098 | WP_001208805.1 | hypothetical protein | VF |
| M9O78_RS25480 (112930) | 112930..113544 | + | 615 | WP_000959785.1 | hypothetical protein | VF |
| M9O78_RS25485 (113554) | 113554..114114 | + | 561 | WP_000014116.1 | hypothetical protein | VF |
| M9O78_RS25490 (114099) | 114099..114755 | + | 657 | WP_001193553.1 | hypothetical protein | VF |
| M9O78_RS25495 (114755) | 114755..116047 | + | 1293 | WP_240111903.1 | hypothetical protein | VF |
| M9O78_RS25500 (116044) | 116044..116292 | - | 249 | WP_001349157.1 | hypothetical protein | - |
| M9O78_RS25505 (117567) | 117567..117915 | + | 349 | Protein_130 | integrase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|