MGE detailed information
MGE type: Conjugative plasmid MGE length: 87915 bp
Accession: NZ_CP097431 Location: 1..87915 Organism: Escherichia coli strain C288 Replicon: plasmid unnamed1
Accession: NZ_CP097431 Location: 1..87915 Organism: Escherichia coli strain C288 Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| M8Y68_RS23025 (1) | 1..2700 | + | 2700 | WP_001405892.1 | hypothetical protein | Relaxase |
| M8Y68_RS23030 (2737) | 2737..5028 | - | 2292 | WP_001289276.1 | F-type conjugative transfer protein TrbC | - |
| M8Y68_RS23035 (5021) | 5021..6091 | - | 1071 | WP_000151583.1 | IncI1-type conjugal transfer protein TrbB | - |
| M8Y68_RS23040 (6110) | 6110..7318 | - | 1209 | WP_052980401.1 | IncI1-type conjugal transfer protein TrbA | - |
| - (7482) | 7482..7539 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| - (7482) | 7482..7539 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| - (7482) | 7482..7539 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| - (7482) | 7482..7539 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| M8Y68_RS23045 (7594) | 7594..7746 | + | 153 | WP_001331364.1 | Hok/Gef family protein | Toxin Detail |
| M8Y68_RS23050 (7818) | 7818..8069 | - | 252 | WP_001291964.1 | hypothetical protein | - |
| M8Y68_RS24480 (8568) | 8568..8663 | + | 96 | WP_001303310.1 | DinQ-like type I toxin DqlB | - |
| M8Y68_RS23060 (8728) | 8728..8904 | - | 177 | WP_001054901.1 | hypothetical protein | - |
| M8Y68_RS23065 (9113) | 9113..9322 | - | 210 | WP_001140543.1 | hemolysin expression modulator Hha | - |
| M8Y68_RS23070 (9420) | 9420..10082 | - | 663 | WP_000644794.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| M8Y68_RS23075 (10153) | 10153..12321 | - | 2169 | WP_000698368.1 | DotA/TraY family protein | - |
| M8Y68_RS23080 (12418) | 12418..13002 | - | 585 | WP_001037985.1 | IncI1-type conjugal transfer protein TraX | - |
| M8Y68_RS23085 (13031) | 13031..14233 | - | 1203 | WP_052980400.1 | IncI1-type conjugal transfer protein TraW | - |
| M8Y68_RS23090 (14200) | 14200..14814 | - | 615 | WP_000337400.1 | IncI1-type conjugal transfer protein TraV | - |
| M8Y68_RS23095 (14814) | 14814..17858 | - | 3045 | WP_052980399.1 | IncI1-type conjugal transfer protein TraU | - |
| M8Y68_RS23100 (17948) | 17948..18748 | - | 801 | WP_001164788.1 | IncI1-type conjugal transfer protein TraT | - |
| M8Y68_RS23105 (18732) | 18732..18920 | - | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| M8Y68_RS23110 (18984) | 18984..19388 | - | 405 | WP_000086960.1 | IncI1-type conjugal transfer protein TraR | - |
| M8Y68_RS23115 (19439) | 19439..19966 | - | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| M8Y68_RS23120 (19966) | 19966..20670 | - | 705 | WP_000801920.1 | IncI1-type conjugal transfer protein TraP | - |
| M8Y68_RS23125 (20670) | 20670..21959 | - | 1290 | WP_001271994.1 | conjugal transfer protein TraO | - |
| M8Y68_RS23130 (21962) | 21962..22945 | - | 984 | WP_001191879.1 | hypothetical protein | VF |
| M8Y68_RS23135 (22956) | 22956..23648 | - | 693 | WP_000138552.1 | DotI/IcmL family type IV secretion protein | - |
| M8Y68_RS23140 (23645) | 23645..23992 | - | 348 | WP_001055900.1 | conjugal transfer protein | - |
| M8Y68_RS23145 (24010) | 24010..27777 | - | 3768 | WP_001141537.1 | DUF5710 domain-containing protein | - |
| M8Y68_RS23150 (27867) | 27867..28418 | - | 552 | WP_000014584.1 | Phospholipase D | VF |
| M8Y68_RS23155 (28433) | 28433..28723 | - | 291 | WP_001299214.1 | hypothetical protein | - |
| M8Y68_RS23160 (28720) | 28720..29868 | - | 1149 | WP_001024974.1 | putative protein YggR | VF |
| M8Y68_RS23165 (29865) | 29865..30683 | - | 819 | WP_000646095.1 | hypothetical protein | VF |
| M8Y68_RS23170 (30680) | 30680..31138 | - | 459 | WP_001079808.1 | hypothetical protein | VF |
| M8Y68_RS23175 (31533) | 31533..32117 | - | 585 | WP_000977522.1 | histidine phosphatase family protein | - |
| M8Y68_RS23180 (32177) | 32177..33379 | - | 1203 | WP_000976353.1 | conjugal transfer protein TraF | - |
| M8Y68_RS23185 (33465) | 33465..34289 | - | 825 | WP_001545755.1 | conjugal transfer protein TraE | - |
| M8Y68_RS23190 (34440) | 34440..35594 | - | 1155 | WP_001139957.1 | site-specific integrase | - |
| M8Y68_RS23195 (35593) | 35593..35946 | + | 354 | WP_001393368.1 | hypothetical protein | - |
| M8Y68_RS23200 (37224) | 37224..38663 | - | 1440 | WP_172401580.1 | hypothetical protein | VF |
| M8Y68_RS23205 (38651) | 38651..39307 | - | 657 | WP_001401940.1 | hypothetical protein | VF |
| M8Y68_RS23210 (39292) | 39292..39852 | - | 561 | WP_000014005.1 | hypothetical protein | VF |
| M8Y68_RS23215 (39862) | 39862..40476 | - | 615 | WP_052980409.1 | hypothetical protein | VF |
| M8Y68_RS23220 (40493) | 40493..41578 | - | 1086 | WP_001208802.1 | hypothetical protein | VF |
| M8Y68_RS23225 (41591) | 41591..43144 | - | 1554 | WP_001697923.1 | hypothetical protein | VF |
| M8Y68_RS23230 (43155) | 43155..43607 | - | 453 | WP_001247333.1 | hypothetical protein | VF |
| M8Y68_RS23235 (43594) | 43594..44889 | - | 1296 | WP_052980408.1 | type 4b pilus protein PilO2 | - |
| M8Y68_RS23240 (44882) | 44882..46564 | - | 1683 | WP_000748143.1 | hypothetical protein | VF |
| M8Y68_RS23245 (46578) | 46578..47015 | - | 438 | WP_000539811.1 | hypothetical protein | VF |
| M8Y68_RS23250 (47015) | 47015..48082 | - | 1068 | WP_001442752.1 | hypothetical protein | VF |
| M8Y68_RS23255 (48834) | 48834..49088 | - | 255 | WP_001136187.1 | PilI type IV pilus biogenesis protein | - |
| M8Y68_RS23260 (49260) | 49260..49943 | - | 684 | WP_000213863.1 | hypothetical protein | - |
| M8Y68_RS23265 (50197) | 50197..50730 | - | 534 | WP_001372168.1 | transcription termination/antitermination NusG family protein | - |
| M8Y68_RS23270 (51172) | 51172..51459 | - | 288 | WP_000074849.1 | conjugal transfer protein TraA | - |
| M8Y68_RS23275 (51377) | 51377..51655 | - | 279 | WP_219065241.1 | ash family protein | - |
| M8Y68_RS23280 (52613) | 52613..53644 | + | 1032 | WP_052980407.1 | plasmid replication initiator RepA | - |
| M8Y68_RS23285 (54548) | 54548..54832 | + | 285 | WP_001178087.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| M8Y68_RS23290 (54832) | 54832..55107 | + | 276 | WP_000421259.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| M8Y68_RS23295 (55213) | 55213..55416 | + | 204 | Protein_54 | hypothetical protein | - |
| M8Y68_RS23300 (55456) | 55456..55674 | - | 219 | Protein_55 | IS1 family transposase | - |
| M8Y68_RS23305 (55707) | 55707..55910 | - | 204 | Protein_56 | Tn3 family transposase TnpA_Tn3 | Transposase |
| M8Y68_RS23310 (55973) | 55973..56677 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| M8Y68_RS23315 (56717) | 56717..57118 | - | 402 | Protein_58 | AAA family ATPase | - |
| M8Y68_RS23320 (57131) | 57131..57991 | - | 861 | WP_000557452.1 | SPbeta prophage-derived aminoglycoside N(3')-acetyltransferase-like protein YokD | ARG |
| M8Y68_RS23325 (58068) | 58068..58928 | - | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| M8Y68_RS23330 (59062) | 59062..59766 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| M8Y68_RS23335 (59820) | 59820..60059 | + | 240 | Protein_62 | transposase | - |
| M8Y68_RS23340 (60117) | 60117..60428 | + | 312 | Protein_63 | aminoglycoside phosphotransferase family protein | - |
| M8Y68_RS23345 (60607) | 60607..61101 | - | 495 | WP_015058884.1 | hypothetical protein | - |
| M8Y68_RS23350 (61157) | 61157..61759 | - | 603 | WP_000521606.1 | ProQ/FINO family protein | - |
| M8Y68_RS23355 (61935) | 61935..62987 | - | 1053 | WP_000655519.1 | hypothetical protein | - |
| M8Y68_RS23360 (63200) | 63200..63790 | - | 591 | WP_001401589.1 | hypothetical protein | - |
| M8Y68_RS23365 (63790) | 63790..64044 | - | 255 | WP_000343106.1 | hypothetical protein | - |
| M8Y68_RS23370 (64577) | 64577..64957 | + | 381 | WP_000465035.1 | hypothetical protein | - |
| M8Y68_RS23375 (64959) | 64959..65738 | + | 780 | WP_001164198.1 | site-specific integrase | - |
| M8Y68_RS23380 (65918) | 65918..66562 | + | 645 | WP_001144036.1 | ParA family protein | - |
| M8Y68_RS23385 (66649) | 66649..66957 | + | 309 | WP_000030199.1 | hypothetical protein | - |
| M8Y68_RS23390 (67371) | 67371..68351 | + | 981 | WP_000688514.1 | plasmid segregation protein ParM | - |
| M8Y68_RS23395 (68344) | 68344..68760 | + | 417 | WP_001278818.1 | plasmid partitioning/stability family protein | - |
| M8Y68_RS23400 (68762) | 68762..70036 | - | 1275 | WP_015058887.1 | translesion error-prone DNA polymerase V subunit UmuC | - |
| M8Y68_RS23405 (70036) | 70036..70473 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| M8Y68_RS23410 (70470) | 70470..70718 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| M8Y68_RS23415 (71136) | 71136..72038 | + | 903 | WP_117102582.1 | DUF1281 domain-containing protein | - |
| M8Y68_RS23420 (72042) | 72042..72347 | + | 306 | WP_015058890.1 | hypothetical protein | - |
| M8Y68_RS23425 (72423) | 72423..73106 | + | 684 | WP_000086144.1 | DNA methylase | - |
| M8Y68_RS23430 (73107) | 73107..73328 | + | 222 | WP_001104885.1 | hypothetical protein | - |
| M8Y68_RS23435 (73309) | 73309..73775 | + | 467 | Protein_82 | DUF1380 family protein | - |
| M8Y68_RS23440 (73826) | 73826..74596 | + | 771 | WP_180350029.1 | hypothetical protein | - |
| M8Y68_RS23445 (75013) | 75013..75438 | + | 426 | WP_001198928.1 | antirestriction protein | - |
| M8Y68_RS23450 (75485) | 75485..75907 | + | 423 | WP_000271741.1 | DUF1380 family protein | - |
| M8Y68_RS23455 (75904) | 75904..76095 | + | 192 | WP_001027516.1 | hypothetical protein | - |
| M8Y68_RS23460 (76865) | 76865..77392 | + | 528 | WP_001276125.1 | single-stranded DNA-binding protein | - |
| M8Y68_RS23465 (77450) | 77450..77683 | + | 234 | WP_000006024.1 | DUF905 domain-containing protein | - |
| M8Y68_RS23470 (77742) | 77742..79700 | + | 1959 | WP_117102583.1 | ParB/RepB/Spo0J family partition protein | - |
| M8Y68_RS23475 (79755) | 79755..80189 | + | 435 | WP_000845898.1 | conjugation system SOS inhibitor PsiB | - |
| M8Y68_RS23480 (80186) | 80186..80905 | + | 720 | WP_001276261.1 | plasmid SOS inhibition protein A | - |
| M8Y68_RS23485 (80902) | 80902..81498 | + | 597 | WP_000978005.1 | hypothetical protein | - |
| M8Y68_RS23490 (81961) | 81961..82461 | + | 501 | WP_000117627.1 | antirestriction protein ArdA | - |
| M8Y68_RS23495 (83190) | 83190..83624 | + | 435 | WP_000218863.1 | hypothetical protein | - |
| M8Y68_RS23500 (83717) | 83717..83983 | + | 267 | WP_001247862.1 | hypothetical protein | - |
| M8Y68_RS23505 (84048) | 84048..84962 | + | 915 | WP_000038334.1 | ISNCY family transposase ISRor2 | VF |
| M8Y68_RS23510 (84962) | 84962..85207 | + | 246 | WP_001260884.1 | hypothetical protein | - |
| M8Y68_RS23515 (85238) | 85238..85489 | - | 252 | WP_000148280.1 | helix-turn-helix transcriptional regulator | - |
| M8Y68_RS23520 (86070) | 86070..86918 | + | 849 | WP_001077030.1 | DUF4942 domain-containing protein | - |
| M8Y68_RS23525 (87004) | 87004..87339 | - | 336 | WP_000157095.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| M8Y68_RS23530 (87573) | 87573..87905 | + | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|