MGE detailed information
MGE type: Genomic_island MGE length: 11356 bp
Accession: NZ_CP097262 Location: 834410..845765 Organism: Salmonella enterica subsp. enterica strain B3-6 Replicon: chromosome
Accession: NZ_CP097262 Location: 834410..845765 Organism: Salmonella enterica subsp. enterica strain B3-6 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| M3N94_RS03985 (829856) | 829856..830954 | + | 1099 | WP_096059418.1 | peptide chain release factor 2 | - |
| M3N94_RS03990 (830964) | 830964..832481 | + | 1518 | WP_000003339.1 | lysine--tRNA ligase | - |
| M3N94_RS03995 (832557) | 832557..833102 | - | 546 | WP_000133994.1 | isopentenyl-diphosphate Delta-isomerase | - |
| M3N94_RS04000 (833367) | 833367..834125 | + | 759 | WP_000244328.1 | amidase activator ActS | - |
| M3N94_RS04010 (834410) | 834410..835216 | - | 807 | WP_001574939.1 | DUF1460 domain-containing protein | - |
| M3N94_RS04015 (835496) | 835496..835747 | - | 252 | WP_001576352.1 | hypothetical protein | - |
| M3N94_RS04020 (835956) | 835956..836183 | + | 228 | WP_000557549.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| M3N94_RS04025 (836183) | 836183..836581 | + | 399 | WP_000911336.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| M3N94_RS04030 (837389) | 837389..837925 | + | 537 | WP_001038502.1 | Attachment invasion locus protein | VF |
| M3N94_RS04035 (837972) | 837972..838604 | + | 633 | WP_000835265.1 | YfdX family protein | - |
| M3N94_RS04040 (839323) | 839323..839904 | + | 582 | WP_001244651.1 | putative fimbrial-like protein YbgD | VF |
| M3N94_RS04045 (840024) | 840024..842507 | + | 2484 | WP_000705505.1 | Outer membrane usher protein PapC | VF |
| M3N94_RS04050 (842548) | 842548..843291 | + | 744 | WP_000798504.1 | Chaperone protein PapD | VF |
| M3N94_RS04055 (843288) | 843288..844364 | + | 1077 | WP_000141330.1 | hypothetical protein | - |
| M3N94_RS04060 (844508) | 844508..845020 | + | 513 | WP_000336257.1 | CaiF/GrlA family transcriptional regulator | - |
| M3N94_RS04065 (845007) | 845007..845765 | + | 759 | WP_000134802.1 | transcriptional regulator | - |
| M3N94_RS04070 (845975) | 845975..846817 | - | 843 | WP_000503690.1 | nickel/cobalt efflux protein RcnA | - |
| M3N94_RS04075 (846939) | 846939..847211 | + | 273 | WP_000019953.1 | Ni(II)/Co(II)-binding transcriptional repressor RcnR | - |
| M3N94_RS04080 (847242) | 847242..848471 | - | 1230 | WP_000036838.1 | amino acid permease | - |
| M3N94_RS04085 (848613) | 848613..849068 | - | 456 | WP_001519547.1 | multidrug/biocide efflux PACE transporter | - |
| M3N94_RS04090 (849172) | 849172..850035 | + | 864 | WP_001270774.1 | LysR family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Genomic island | TA297244 | UFRD01000002 | 4451871..4463194 | 0.009 |