MGE detailed information
MGE type: Conjugative plasmid MGE length: 124392 bp
Accession: NZ_CP097171 Location: 1..124392 Organism: Escherichia coli strain AR13438 Replicon: plasmid pAR13438_1
Accession: NZ_CP097171 Location: 1..124392 Organism: Escherichia coli strain AR13438 Replicon: plasmid pAR13438_1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| M3M51_RS23805 (1) | 1..978 | + | 978 | WP_000361611.1 | RepB family plasmid replication initiator protein | - |
| M3M51_RS23810 (1263) | 1263..2003 | - | 741 | WP_001066954.1 | tyrosine-type recombinase/integrase | - |
| M3M51_RS23815 (2124) | 2124..2312 | - | 189 | WP_014640565.1 | hypothetical protein | - |
| M3M51_RS23820 (2686) | 2686..3588 | - | 903 | WP_001312822.1 | hypothetical protein | VF |
| M3M51_RS23825 (3657) | 3657..4766 | - | 1110 | WP_000771475.1 | SDR family oxidoreductase | - |
| M3M51_RS23830 (5199) | 5199..6152 | - | 954 | WP_000280980.1 | Protease 7 | VF |
| M3M51_RS23835 (7449) | 7449..7628 | - | 180 | Protein_6 | integrase core domain-containing protein | - |
| M3M51_RS23840 (7767) | 7767..8980 | + | 1214 | WP_162842477.1 | IS3 family transposase IS629 | Transposase |
| M3M51_RS23845 (9128) | 9128..9396 | - | 269 | Protein_8 | IS3 family transposase ISLad1 | Transposase |
| M3M51_RS23850 (9453) | 9453..10150 | + | 698 | WP_095033700.1 | IS1-like element IS1B family transposase | - |
| M3M51_RS23855 (10212) | 10212..11003 | - | 792 | WP_000016493.1 | site-specific integrase | - |
| M3M51_RS23860 (11000) | 11000..11689 | - | 690 | WP_000796228.1 | hypothetical protein | - |
| M3M51_RS23865 (11733) | 11733..12083 | - | 351 | WP_000493379.1 | hypothetical protein | - |
| M3M51_RS23870 (12628) | 12628..13716 | + | 1089 | WP_000952217.1 | transcriptional repressor PifC | - |
| M3M51_RS23875 (13718) | 13718..15943 | + | 2226 | WP_000698737.1 | P-loop NTPase fold protein | - |
| M3M51_RS23880 (15993) | 15993..16892 | - | 900 | WP_000963206.1 | nucleotide-binding protein | - |
| M3M51_RS23885 (16882) | 16882..17172 | - | 291 | WP_000111771.1 | hypothetical protein | - |
| M3M51_RS23890 (17468) | 17468..17698 | + | 231 | WP_001261287.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| M3M51_RS23895 (17695) | 17695..18111 | + | 417 | WP_001044768.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| M3M51_RS23900 (18273) | 18273..20411 | - | 2139 | WP_000350638.1 | AAA family ATPase | - |
| M3M51_RS23905 (20765) | 20765..21022 | + | 258 | WP_000343085.1 | hypothetical protein | - |
| M3M51_RS23910 (21022) | 21022..21612 | + | 591 | WP_000194574.1 | hypothetical protein | - |
| M3M51_RS23915 (21875) | 21875..23431 | + | 1557 | WP_000818556.1 | AAA family ATPase | - |
| M3M51_RS23920 (23623) | 23623..24240 | + | 618 | WP_000521603.1 | ProQ/FINO family protein | - |
| M3M51_RS23925 (24533) | 24533..25570 | - | 1038 | WP_044502555.1 | permease | - |
| M3M51_RS23930 (25675) | 25675..25998 | + | 324 | WP_001175594.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| M3M51_RS23935 (26197) | 26197..26901 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| M3M51_RS23940 (26961) | 26961..27974 | - | 1014 | WP_000845039.1 | IS91 family transposase ISAzo26 | Transposase |
| M3M51_RS23945 (28119) | 28119..28616 | + | 498 | WP_001083725.1 | IS1595 family transposase ISSsu9 | ARG |
| M3M51_RS23950 (28728) | 28728..29018 | + | 291 | WP_001336345.1 | DUF1010 domain-containing protein | - |
| M3M51_RS23955 (29024) | 29024..29862 | + | 839 | Protein_30 | Streptomycin 3''-adenylyltransferase | ARG |
| M3M51_RS23960 (29979) | 29979..30326 | + | 348 | WP_000679427.1 | Multidrug transporter EmrE | ARG |
| M3M51_RS23965 (30320) | 30320..31159 | + | 840 | WP_000259031.1 | Dihydropteroate synthase | ARG |
| M3M51_RS23970 (31564) | 31564..33105 | + | 1542 | WP_000050481.1 | IS91 family transposase ISVsa3 | Transposase |
| M3M51_RS23975 (33339) | 33339..33617 | + | 279 | Protein_34 | hypothetical protein | - |
| M3M51_RS23980 (33698) | 33698..34453 | - | 756 | WP_012372818.1 | 16S rRNA (guanine(1405)-N(7))-methyltransferase | ARG |
| M3M51_RS23985 (34623) | 34623..35483 | - | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| M3M51_RS23990 (36304) | 36304..36483 | - | 180 | Protein_37 | IS1182 family transposase ISCfr1 | Transposase |
| M3M51_RS23995 (36529) | 36529..37233 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| M3M51_RS24000 (37363) | 37363..38499 | + | 1137 | WP_000080861.1 | DUF3883 domain-containing protein | - |
| M3M51_RS24005 (38614) | 38614..39819 | + | 1206 | Protein_40 | IS1182 family transposase ISCfr1 | Transposase |
| M3M51_RS24010 (39883) | 39883..40587 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| M3M51_RS24015 (40653) | 40653..41198 | + | 546 | Protein_42 | Tn3 family transposase TnpA_Tn3 | Transposase |
| M3M51_RS24020 (41234) | 41234..41649 | - | 416 | Protein_43 | IS1-like element IS1B family transposase | - |
| M3M51_RS24025 (41898) | 41898..42299 | - | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| M3M51_RS24030 (42232) | 42232..42489 | - | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| M3M51_RS24035 (42582) | 42582..43235 | - | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
| M3M51_RS24040 (43333) | 43333..43473 | - | 141 | WP_001333237.1 | hypothetical protein | - |
| M3M51_RS24045 (44175) | 44175..45032 | - | 858 | WP_000130940.1 | incFII family plasmid replication initiator RepA | - |
| M3M51_RS24050 (45025) | 45025..45072 | - | 48 | WP_077822033.1 | hypothetical protein | - |
| M3M51_RS24055 (45063) | 45063..45299 | + | 237 | WP_223368648.1 | replication protein RepA | - |
| M3M51_RS24060 (45325) | 45325..45585 | - | 261 | WP_000083818.1 | replication regulatory protein RepA | - |
| M3M51_RS24065 (45824) | 45824..46397 | - | 574 | Protein_52 | DUF2726 domain-containing protein | - |
| M3M51_RS24070 (46435) | 46435..46644 | - | 210 | WP_001333231.1 | hemolysin expression modulator Hha | - |
| M3M51_RS24075 (46690) | 46690..47151 | - | 462 | WP_001233871.1 | thermonuclease family protein | - |
| M3M51_RS24080 (47394) | 47394..47606 | - | 213 | WP_012311405.1 | hypothetical protein | - |
| M3M51_RS24085 (47744) | 47744..48304 | - | 561 | WP_000139359.1 | fertility inhibition protein FinO | - |
| M3M51_RS24090 (48359) | 48359..49105 | - | 747 | WP_000205777.1 | conjugal transfer pilus acetylase TraX | - |
| M3M51_RS24095 (49125) | 49125..49985 | - | 861 | Protein_58 | Multifunctional conjugation protein TraI | Relaxase |
| M3M51_RS24100 (50041) | 50041..50745 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| M3M51_RS24105 (50810) | 50810..51190 | + | 381 | Protein_60 | Tn3 family transposase TnpR_TnAs3 | Transposase |
| M3M51_RS24110 (51193) | 51193..54159 | + | 2967 | WP_001138064.1 | Tn3 family transposase TnpA_TnAs3 | Transposase |
| M3M51_RS24115 (54238) | 54238..55242 | + | 1005 | WP_000427619.1 | IS110 family transposase IS5075 | Transposase |
| M3M51_RS24120 (55514) | 55514..55600 | - | 87 | Protein_63 | Arm DNA-binding domain-containing protein | - |
| M3M51_RS24125 (55930) | 55930..56745 | + | 816 | WP_001043260.1 | Dihydropteroate synthase | ARG |
| M3M51_RS24130 (56806) | 56806..57609 | + | 804 | WP_001082319.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| M3M51_RS24135 (57609) | 57609..58445 | + | 837 | WP_000480972.1 | hypothetical protein | ARG |
| M3M51_RS24140 (58751) | 58751..58993 | + | 243 | WP_000844627.1 | transposase | - |
| M3M51_RS24145 (59025) | 59025..59675 | - | 651 | WP_001493764.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| M3M51_RS24150 (59781) | 59781..60980 | + | 1200 | WP_032153701.1 | Tetracycline resistance protein, class C | ARG |
| M3M51_RS24155 (60947) | 60947..61135 | - | 189 | Protein_70 | IS91 family transposase | - |
| M3M51_RS24160 (61247) | 61247..61552 | - | 306 | WP_001255015.1 | HTH-type transcriptional regulator HdfR | VF |
| M3M51_RS24165 (61580) | 61580..62794 | - | 1215 | WP_023300759.1 | Bicyclomycin resistance protein | ARG |
| M3M51_RS24170 (63011) | 63011..63895 | - | 885 | WP_021598067.1 | DUF3363 domain-containing protein | - |
| M3M51_RS24175 (63926) | 63926..65419 | - | 1494 | WP_001120888.1 | IS91 family transposase ISVsa3 | Transposase |
| M3M51_RS24180 (65630) | 65630..65854 | - | 225 | WP_000743213.1 | hypothetical protein | - |
| M3M51_RS24185 (65851) | 65851..66588 | - | 738 | WP_001366550.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| M3M51_RS24190 (67074) | 67074..67214 | - | 141 | WP_001044210.1 | hypothetical protein | - |
| M3M51_RS24195 (67220) | 67220..67924 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| M3M51_RS24200 (67989) | 67989..68168 | + | 180 | Protein_79 | IS1380 family transposase | - |
| M3M51_RS24205 (68418) | 68418..69293 | + | 876 | WP_032277257.1 | Beta-lactamase CTX-M-97 | ARG |
| M3M51_RS24210 (69328) | 69328..70296 | + | 969 | WP_013362812.1 | IS5 family transposase IS903B | Transposase |
| M3M51_RS24215 (70353) | 70353..70982 | + | 630 | Protein_82 | TonB-dependent receptor | - |
| M3M51_RS24220 (71046) | 71046..71750 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| M3M51_RS24225 (71872) | 71872..72777 | + | 906 | WP_000219391.1 | hypothetical protein | ARG |
| M3M51_RS24230 (72774) | 72774..74012 | + | 1239 | WP_000004159.1 | macrolide resistance MFS transporter Mrx(A) | - |
| M3M51_RS24235 (74012) | 74012..74596 | + | 585 | WP_001137892.1 | macrolide-binding transcriptional repressor MphR(A) | - |
| M3M51_RS24240 (75089) | 75089..75598 | - | 510 | Protein_87 | IS6 family transposase IS6100 | Transposase |
| M3M51_RS24245 (75650) | 75650..76354 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| M3M51_RS24250 (76414) | 76414..77274 | - | 861 | Protein_89 | conjugal transfer protein TraN | - |
| M3M51_RS24255 (77271) | 77271..77909 | - | 639 | WP_001104248.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| M3M51_RS24260 (77937) | 77937..78389 | - | 453 | WP_000069427.1 | hypothetical protein | - |
| M3M51_RS24265 (78419) | 78419..78880 | - | 462 | WP_000277845.1 | hypothetical protein | - |
| M3M51_RS24270 (78906) | 78906..79898 | - | 993 | WP_000830839.1 | conjugal transfer pilus assembly protein TraU | - |
| M3M51_RS24275 (79895) | 79895..80527 | - | 633 | WP_001203745.1 | type-F conjugative transfer system protein TraW | - |
| M3M51_RS24280 (80524) | 80524..80910 | - | 387 | WP_000214084.1 | type-F conjugative transfer system protein TrbI | - |
| M3M51_RS24285 (80907) | 80907..83534 | - | 2628 | WP_001064268.1 | type IV secretion system protein TraC | - |
| M3M51_RS24290 (83694) | 83694..83915 | - | 222 | WP_001278689.1 | conjugal transfer protein TraR | - |
| M3M51_RS24295 (84050) | 84050..84565 | - | 516 | WP_000809906.1 | type IV conjugative transfer system lipoprotein TraV | - |
| M3M51_RS24300 (84562) | 84562..84813 | - | 252 | WP_001038341.1 | conjugal transfer protein TrbG | - |
| M3M51_RS24305 (84810) | 84810..85127 | - | 318 | WP_001057292.1 | conjugal transfer protein TrbD | - |
| M3M51_RS24310 (85124) | 85124..85696 | - | 573 | WP_000002780.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| M3M51_RS24315 (85686) | 85686..87113 | - | 1428 | WP_000146685.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| M3M51_RS24320 (87113) | 87113..87841 | - | 729 | WP_001230787.1 | type-F conjugative transfer system secretin TraK | - |
| M3M51_RS24325 (87828) | 87828..88394 | - | 567 | WP_000399792.1 | type IV conjugative transfer system protein TraE | - |
| M3M51_RS24330 (88416) | 88416..88727 | - | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| M3M51_RS24335 (88742) | 88742..89101 | - | 360 | WP_000340272.1 | type IV conjugative transfer system pilin TraA | - |
| M3M51_RS24340 (89135) | 89135..89362 | - | 228 | WP_001254386.1 | conjugal transfer relaxosome protein TraY | - |
| M3M51_RS24345 (89456) | 89456..90142 | - | 687 | WP_000332484.1 | PAS domain-containing protein | - |
| M3M51_RS24350 (90333) | 90333..90716 | - | 384 | WP_000124981.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| M3M51_RS24355 (90993) | 90993..91640 | + | 648 | WP_000614936.1 | hypothetical protein | VF |
| M3M51_RS24360 (91937) | 91937..92758 | - | 822 | WP_001234469.1 | DUF932 domain-containing protein | - |
| M3M51_RS24365 (92880) | 92880..93167 | - | 288 | WP_000107535.1 | hypothetical protein | - |
| M3M51_RS24370 (93192) | 93192..93398 | - | 207 | WP_000547939.1 | hypothetical protein | - |
| M3M51_RS24375 (93468) | 93468..93641 | + | 174 | Protein_114 | hypothetical protein | - |
| M3M51_RS24380 (93639) | 93639..93869 | - | 231 | WP_001426396.1 | hypothetical protein | - |
| M3M51_RS24385 (94089) | 94089..94214 | - | 126 | WP_001372321.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| M3M51_RS24390 (94156) | 94156..94305 | - | 150 | Protein_117 | plasmid maintenance protein Mok | - |
| - (94291) | 94291..94322 | - | 32 | NuclAT_1 | - | Antitoxin Detail |
| - (94291) | 94291..94322 | - | 32 | NuclAT_1 | - | Antitoxin Detail |
| - (94291) | 94291..94322 | - | 32 | NuclAT_1 | - | Antitoxin Detail |
| - (94291) | 94291..94322 | - | 32 | NuclAT_1 | - | Antitoxin Detail |
| - (95764) | 95764..95961 | - | 198 | NuclAT_0 | - | - |
| - (95764) | 95764..95961 | - | 198 | NuclAT_0 | - | - |
| - (95764) | 95764..95961 | - | 198 | NuclAT_0 | - | - |
| - (95764) | 95764..95961 | - | 198 | NuclAT_0 | - | - |
| M3M51_RS24400 (95773) | 95773..95961 | + | 189 | WP_001299721.1 | hypothetical protein | - |
| M3M51_RS24405 (95930) | 95930..96692 | - | 763 | Protein_120 | plasmid SOS inhibition protein A | - |
| M3M51_RS24410 (96689) | 96689..97123 | - | 435 | WP_000845895.1 | conjugation system SOS inhibitor PsiB | - |
| M3M51_RS24415 (97178) | 97178..99136 | - | 1959 | WP_001145469.1 | ParB/RepB/Spo0J family partition protein | - |
| M3M51_RS24420 (99195) | 99195..99428 | - | 234 | WP_000006004.1 | DUF905 domain-containing protein | - |
| M3M51_RS24425 (99484) | 99484..100011 | - | 528 | WP_000290793.1 | single-stranded DNA-binding protein | - |
| M3M51_RS24430 (100484) | 100484..100756 | - | 273 | WP_072133095.1 | hypothetical protein | - |
| M3M51_RS24435 (100654) | 100654..100908 | - | 255 | WP_050195272.1 | hypothetical protein | - |
| M3M51_RS24440 (100908) | 100908..101471 | - | 564 | WP_001311069.1 | class I SAM-dependent methyltransferase | - |
| M3M51_RS24445 (101517) | 101517..102878 | - | 1362 | WP_000170681.1 | DUF3560 domain-containing protein | - |
| M3M51_RS24450 (102930) | 102930..103160 | - | 231 | WP_000218642.1 | hypothetical protein | - |
| M3M51_RS24455 (103677) | 103677..103930 | + | 254 | Protein_130 | hypothetical protein | - |
| M3M51_RS24460 (104154) | 104154..104336 | - | 183 | WP_001027505.1 | hypothetical protein | - |
| M3M51_RS24465 (104336) | 104336..104797 | - | 462 | WP_042007484.1 | DUF1380 family protein | - |
| M3M51_RS24470 (104797) | 104797..105222 | - | 426 | WP_001198922.1 | antirestriction protein | - |
| M3M51_RS24475 (105624) | 105624..106595 | + | 972 | WP_000082154.1 | IS110 family transposase ISEc32 | Transposase |
| M3M51_RS24485 (107396) | 107396..107731 | - | 336 | WP_000343070.1 | hypothetical protein | - |
| M3M51_RS24490 (107800) | 107800..108147 | - | 348 | WP_001350917.1 | hypothetical protein | - |
| M3M51_RS24495 (108144) | 108144..108313 | - | 170 | Protein_138 | hypothetical protein | - |
| M3M51_RS24500 (108950) | 108950..109921 | - | 972 | WP_000817028.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| M3M51_RS24505 (109921) | 109921..111087 | - | 1167 | WP_001238646.1 | hypothetical protein | VF |
| M3M51_RS24515 (112240) | 112240..113742 | - | 1503 | WP_000715078.1 | hypothetical protein | - |
| M3M51_RS24520 (114360) | 114360..114785 | - | 426 | WP_012300440.1 | hypothetical protein | - |
| M3M51_RS24525 (114927) | 114927..115406 | + | 480 | WP_000190053.1 | hypothetical protein | - |
| M3M51_RS24530 (115846) | 115846..116097 | + | 252 | WP_000163248.1 | hypothetical protein | - |
| M3M51_RS24535 (116070) | 116070..116201 | - | 132 | Protein_146 | phosphopyruvate hydratase | - |
| M3M51_RS24540 (116199) | 116199..116456 | + | 258 | Protein_147 | Tn3 family transposase | - |
| M3M51_RS24545 (116690) | 116690..117547 | - | 858 | WP_000968140.1 | Manganese transport system membrane protein MntB | ARG |
| M3M51_RS24550 (117544) | 117544..118401 | - | 858 | WP_000992806.1 | Manganese transport system membrane protein MntB | ARG |
| M3M51_RS24555 (118398) | 118398..119225 | - | 828 | WP_061093066.1 | Manganese transport system ATP-binding protein MntB | VF |
| M3M51_RS24560 (119225) | 119225..120139 | - | 915 | WP_000949004.1 | putative periplasmic iron-binding protein | VF |
| M3M51_RS24565 (120495) | 120495..121192 | + | 698 | WP_095033700.1 | IS1-like element IS1B family transposase | - |
| M3M51_RS24570 (121372) | 121372..121896 | - | 525 | Protein_153 | DUF4113 domain-containing protein | - |
| M3M51_RS24575 (121957) | 121957..122061 | - | 105 | Protein_154 | AAA family ATPase | - |
| M3M51_RS24580 (122063) | 122063..122386 | - | 324 | Protein_155 | IS21 family transposase IS21 | Transposase |
| M3M51_RS24585 (122635) | 122635..123848 | + | 1214 | WP_085947772.1 | IS3 family transposase ISCfr6 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|