NZ_CP0969031..161535

MGE detailed information

MGE type: Conjugative plasmid        MGE length: 161535 bp
Accession: NZ_CP096903        Location: 1..161535         Organism: Escherichia coli strain RSHH22       Replicon: plasmid pEC_RSHH22_1


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
M1Y13_RS24940 (1) 1..927 + 927 WP_129542133.1 fimbrial protein -
M1Y13_RS24945 (1011) 1011..1643 - 633 Protein_1 integrase core domain-containing protein -
M1Y13_RS24950 (1748) 1748..2128 + 381 WP_129542134.1 IS66 family transposase ISEc8 Transposase
M1Y13_RS24955 (2125) 2125..2472 + 348 WP_061892145.1 IS66 family transposase ISEc8 Transposase
M1Y13_RS24960 (2522) 2522..3935 + 1414 Protein_4 IS66 family transposase ISEc8 Transposase
M1Y13_RS24965 (4128) 4128..4487 + 360 Protein_5 IS21 family transposase ISEc12 Transposase
M1Y13_RS24970 (4534) 4534..6153 - 1620 WP_075262665.1 ISL3 family transposase ISEc38 Transposase
M1Y13_RS24975 (6330) 6330..6920 - 591 WP_032334750.1 hypothetical protein -
M1Y13_RS24980 (6920) 6920..7177 - 258 WP_000371885.1 hypothetical protein -
M1Y13_RS24985 (7746) 7746..8159 + 414 WP_129542137.1 hypothetical protein -
M1Y13_RS24990 (8161) 8161..8937 + 777 WP_129542136.1 site-specific integrase -
M1Y13_RS24995 (9074) 9074..9349 - 276 WP_000239529.1 hypothetical protein -
M1Y13_RS25000 (9343) 9343..9987 - 645 WP_000633911.1 AAA family ATPase -
M1Y13_RS25005 (10216) 10216..11187 + 972 WP_001103690.1 plasmid segregation protein ParM -
M1Y13_RS25010 (11192) 11192..11584 + 393 WP_000340829.1 plasmid partitioning/stability family protein -
M1Y13_RS25015 (11589) 11589..12689 - 1101 Protein_15 DUF4113 domain-containing protein -
M1Y13_RS25020 (12689) 12689..13126 - 438 WP_103745715.1 translesion error-prone DNA polymerase V autoproteolytic subunit -
M1Y13_RS25025 (13123) 13123..13371 - 249 WP_129542135.1 DinI-like family protein -
M1Y13_RS25030 (14394) 14394..16118 + 1725 WP_031618787.1 group II intron reverse transcriptase/maturase -
M1Y13_RS25035 (16195) 16195..16967 + 773 Protein_19 DUF1281 domain-containing protein -
M1Y13_RS25040 (17049) 17049..17699 + 651 WP_000993931.1 IS66 family transposase IS679 Transposase
M1Y13_RS25045 (17699) 17699..18046 + 348 WP_000624618.1 IS66 family transposase ISCro1 Transposase
M1Y13_RS25050 (18066) 18066..19637 + 1572 WP_000381416.1 IS66 family transposase IS679 Transposase
M1Y13_RS25055 (19671) 19671..19802 + 132 Protein_23 hypothetical protein -
M1Y13_RS25060 (19799) 19799..20110 + 312 WP_129542165.1 hypothetical protein -
M1Y13_RS25065 (20254) 20254..21873 + 1620 WP_075262665.1 ISL3 family transposase ISEc38 Transposase
M1Y13_RS25070 (21927) 21927..22211 - 285 Protein_26 DUF6404 family protein -
M1Y13_RS25075 (22299) 22299..23198 + 900 Protein_27 IS110 family transposase IS5075 Transposase
M1Y13_RS25080 (23684) 23684..25936 + 2253 WP_129542139.1 Catalase HPII VF
M1Y13_RS25085 (26321) 26321..26575 + 255 WP_032334811.1 type II toxin-antitoxin system Phd/YefM family antitoxin -
M1Y13_RS25090 (26572) 26572..26994 + 423 WP_237897981.1 type II toxin-antitoxin system VapC family toxin -
M1Y13_RS25095 (27054) 27054..27503 + 450 Protein_31 protein rep -
M1Y13_RS25100 (27621) 27621..28349 + 729 WP_032334813.1 membrane lipoprotein lipid attachment site-containing protein -
M1Y13_RS25105 (28632) 28632..29378 - 747 WP_129542164.1 IS21 family transposase ISEc12 Transposase
M1Y13_RS25110 (29393) 29393..30637 - 1245 WP_263536093.1 IS21 family transposase ISEc12 Transposase
M1Y13_RS25115 (30678) 30678..32297 + 1620 WP_075262665.1 ISL3 family transposase ISEc38 Transposase
M1Y13_RS25120 (32381) 32381..32452 + 72 Protein_36 hypothetical protein -
M1Y13_RS25125 (32534) 32534..34234 - 1701 WP_129542140.1 group II intron reverse transcriptase/maturase -
M1Y13_RS25130 (34856) 34856..35467 + 612 Protein_38 DNA methylase -
M1Y13_RS25135 (35468) 35468..35689 + 222 WP_001104887.1 hypothetical protein -
M1Y13_RS25140 (35670) 35670..36135 + 466 Protein_40 DUF1380 family protein -
M1Y13_RS25145 (36180) 36180..36950 + 771 WP_213952596.1 hypothetical protein -
M1Y13_RS25150 (37362) 37362..37787 + 426 WP_242386901.1 antirestriction protein -
M1Y13_RS25155 (37834) 37834..38256 + 423 WP_129542142.1 DUF1380 family protein -
M1Y13_RS25160 (38253) 38253..38444 + 192 WP_001027495.1 hypothetical protein -
M1Y13_RS25165 (38777) 38777..38845 - 69 Protein_45 pilus protein -
M1Y13_RS25170 (39866) 39866..41767 + 1902 WP_129542143.1 group II intron reverse transcriptase/maturase -
M1Y13_RS25175 (41917) 41917..42402 + 486 WP_129542144.1 single-stranded DNA-binding protein -
M1Y13_RS25180 (42459) 42459..42692 + 234 WP_024261882.1 DUF905 domain-containing protein -
M1Y13_RS25185 (42754) 42754..44712 + 1959 WP_129542145.1 ParB/RepB/Spo0J family partition protein -
M1Y13_RS25190 (44767) 44767..45201 + 435 WP_023166801.1 conjugation system SOS inhibitor PsiB -
M1Y13_RS25195 (45198) 45198..45917 + 720 WP_129542146.1 plasmid SOS inhibition protein A -
M1Y13_RS25200 (45914) 45914..46510 + 597 WP_129542147.1 hypothetical protein -
M1Y13_RS25205 (46973) 46973..47473 + 501 WP_000117626.1 antirestriction protein ArdA -
M1Y13_RS25210 (47613) 47613..47891 - 279 WP_236467162.1 hypothetical protein -
M1Y13_RS25215 (48202) 48202..48636 + 435 WP_000218863.1 hypothetical protein -
M1Y13_RS25220 (48728) 48728..48994 + 267 WP_001247862.1 hypothetical protein -
M1Y13_RS25225 (49059) 49059..50000 + 942 WP_129542148.1 Recombination-promoting nuclease RpnA VF
M1Y13_RS25230 (50000) 50000..50245 + 246 WP_174705345.1 hypothetical protein -
M1Y13_RS25235 (50276) 50276..50527 - 252 WP_000148285.1 helix-turn-helix transcriptional regulator -
M1Y13_RS25240 (50561) 50561..50863 - 303 WP_241221885.1 hypothetical protein -
M1Y13_RS25245 (51107) 51107..51955 + 849 WP_129542151.1 DUF4942 domain-containing protein -
M1Y13_RS25250 (52040) 52040..52375 - 336 WP_000157095.1 molybdopterin-guanine dinucleotide biosynthesis protein MobC -
M1Y13_RS25255 (52609) 52609..52941 + 333 WP_001283947.1 IncI1-type relaxosome accessory protein NikA -
M1Y13_RS25260 (52952) 52952..55648 + 2697 WP_129542152.1 Protein TraI Relaxase
M1Y13_RS25265 (55674) 55674..56246 + 573 WP_129542153.1 hypothetical protein -
M1Y13_RS25270 (56296) 56296..58485 - 2190 WP_129542154.1 peptidase domain-containing ABC transporter -
M1Y13_RS25275 (58485) 58485..59738 - 1254 WP_031618765.1 HlyD family efflux transporter periplasmic adaptor subunit -
M1Y13_RS25280 (59841) 59841..60203 - 363 WP_242386836.1 CPBP family intramembrane metalloprotease -
M1Y13_RS25285 (61261) 61261..63552 - 2292 WP_129542156.1 F-type conjugative transfer protein TrbC -
M1Y13_RS25290 (63545) 63545..64615 - 1071 WP_052974687.1 IncI1-type conjugal transfer protein TrbB -
M1Y13_RS25295 (64634) 64634..65842 - 1209 WP_242386835.1 IncI1-type conjugal transfer protein TrbA -
- (66022) 66022..66079 - 58 NuclAT_0 - Antitoxin Detail
- (66022) 66022..66079 - 58 NuclAT_0 - Antitoxin Detail
- (66022) 66022..66079 - 58 NuclAT_0 - Antitoxin Detail
- (66022) 66022..66079 - 58 NuclAT_0 - Antitoxin Detail
M1Y13_RS25300 (66134) 66134..66286 + 153 WP_001331364.1 Hok/Gef family protein Toxin Detail
M1Y13_RS25305 (66358) 66358..66609 - 252 WP_001291965.1 hypothetical protein -
M1Y13_RS25935 (67110) 67110..67205 + 96 WP_000609148.1 DinQ-like type I toxin DqlB -
M1Y13_RS25315 (67270) 67270..67446 - 177 WP_001054898.1 hypothetical protein -
M1Y13_RS25320 (67838) 67838..68047 + 210 WP_000062603.1 HEAT repeat domain-containing protein -
M1Y13_RS25325 (68119) 68119..68601 - 483 WP_001672078.1 plasmid IncI1-type surface exclusion protein ExcA -
M1Y13_RS25330 (68842) 68842..71010 - 2169 WP_129542158.1 DotA/TraY family protein -
M1Y13_RS25335 (71107) 71107..71691 - 585 WP_129542159.1 IncI1-type conjugal transfer protein TraX -
M1Y13_RS25340 (71720) 71720..72922 - 1203 WP_129542160.1 IncI1-type conjugal transfer protein TraW -
M1Y13_RS25345 (72889) 72889..73503 - 615 WP_000337394.1 IncI1-type conjugal transfer protein TraV -
M1Y13_RS25350 (73503) 73503..76547 - 3045 WP_012783939.1 IncI1-type conjugal transfer protein TraU -
M1Y13_RS25355 (76637) 76637..77437 - 801 WP_064198685.1 IncI1-type conjugal transfer protein TraT -
M1Y13_RS25360 (77421) 77421..77609 - 189 WP_001277255.1 putative conjugal transfer protein TraS -
M1Y13_RS25365 (77673) 77673..78077 - 405 WP_000086955.1 conjugal transfer protein TraR -
M1Y13_RS25370 (78127) 78127..78654 - 528 WP_022630880.1 conjugal transfer protein TraQ -
M1Y13_RS25375 (78654) 78654..79358 - 705 WP_129542161.1 IncI1-type conjugal transfer protein TraP -
M1Y13_RS25380 (79358) 79358..80647 - 1290 WP_001271991.1 conjugal transfer protein TraO -
M1Y13_RS25385 (80650) 80650..81633 - 984 WP_001191880.1 hypothetical protein VF
M1Y13_RS25390 (81678) 81678..83291 - 1614 WP_000080195.1 IS66 family transposase ISEc23 Transposase
M1Y13_RS25395 (83322) 83322..83672 - 351 WP_000624722.1 IS66 family transposase ISEc23 Transposase
M1Y13_RS25400 (83669) 83669..84094 - 426 WP_000422741.1 IS66 family transposase ISEc23 Transposase
M1Y13_RS25405 (84182) 84182..85018 + 837 Protein_93 F-type conjugal transfer pilus assembly protein TraB -
M1Y13_RS25410 (85008) 85008..85568 + 561 WP_061892134.1 conjugal transfer pilus-stabilizing protein TraP -
M1Y13_RS25415 (85507) 85507..85779 + 273 WP_061892133.1 conjugal transfer protein TrbD -
M1Y13_RS25420 (85776) 85776..86291 + 516 WP_061892132.1 type IV conjugative transfer system lipoprotein TraV -
M1Y13_RS25425 (86426) 86426..86647 + 222 WP_021532666.1 conjugal transfer protein TraR -
M1Y13_RS25430 (86640) 86640..87113 + 474 WP_061892131.1 hypothetical protein -
M1Y13_RS25435 (87193) 87193..87411 + 219 WP_061892130.1 hypothetical protein -
M1Y13_RS25440 (87439) 87439..87786 + 348 WP_000802783.1 hypothetical protein -
M1Y13_RS25445 (87913) 87913..90543 + 2631 WP_129542111.1 type IV secretion system protein TraC -
M1Y13_RS25450 (90540) 90540..90926 + 387 WP_129542112.1 type-F conjugative transfer system protein TrbI -
M1Y13_RS25455 (90923) 90923..91555 + 633 WP_129542113.1 type-F conjugative transfer system protein TraW -
M1Y13_RS25460 (91552) 91552..92544 + 993 WP_129542114.1 conjugal transfer pilus assembly protein TraU -
M1Y13_RS25465 (92565) 92565..92744 + 180 WP_100007973.1 hypothetical protein -
M1Y13_RS25470 (92728) 92728..93111 + 384 WP_242386849.1 hypothetical protein -
M1Y13_RS25475 (93174) 93174..93695 + 522 WP_129542115.1 hypothetical protein -
M1Y13_RS25480 (93722) 93722..94360 + 639 WP_129542116.1 type-F conjugative transfer system pilin assembly protein TrbC -
M1Y13_RS25485 (94357) 94357..94728 + 372 WP_129542117.1 hypothetical protein -
M1Y13_RS25490 (94754) 94754..95176 + 423 WP_001229309.1 HNH endonuclease signature motif containing protein -
M1Y13_RS25495 (95173) 95173..97002 + 1830 WP_129542118.1 type-F conjugative transfer system mating-pair stabilization protein TraN -
M1Y13_RS25500 (97029) 97029..97286 + 258 Protein_112 conjugal transfer protein TrbE -
M1Y13_RS25505 (97279) 97279..98022 + 744 WP_129542119.1 type-F conjugative transfer system pilin assembly protein TraF -
M1Y13_RS25510 (98036) 98036..98398 + 363 WP_129542120.1 hypothetical protein -
M1Y13_RS25515 (98529) 98529..98930 + 402 WP_242386847.1 hypothetical protein -
M1Y13_RS25520 (98997) 98997..99278 + 282 WP_129542122.1 type-F conjugative transfer system pilin chaperone TraQ -
M1Y13_RS25525 (99265) 99265..99810 + 546 WP_129542123.1 type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB -
M1Y13_RS25530 (99740) 99740..100087 + 348 WP_126697346.1 P-type conjugative transfer protein TrbJ -
M1Y13_RS25535 (100068) 100068..100460 + 393 WP_242386846.1 F-type conjugal transfer protein TrbF -
M1Y13_RS25540 (100447) 100447..101820 + 1374 WP_129542125.1 conjugal transfer pilus assembly protein TraH -
M1Y13_RS25545 (101817) 101817..104654 + 2838 WP_129542126.1 conjugal transfer mating-pair stabilization protein TraG -
M1Y13_RS25550 (104687) 104687..105190 + 504 WP_129542127.1 conjugal transfer entry exclusion protein TraS -
M1Y13_RS25555 (105230) 105230..105961 + 732 WP_061892709.1 conjugal transfer complement resistance protein TraT -
M1Y13_RS25560 (106164) 106164..106904 + 741 WP_061892706.1 hypothetical protein -
M1Y13_RS25565 (106955) 106955..109144 + 2190 WP_242386844.1 type IV conjugative transfer system coupling protein TraD -
M1Y13_RS25570 (109144) 109144..114414 + 5271 WP_061892704.1 Multifunctional conjugation protein TraI Relaxase
M1Y13_RS25575 (114434) 114434..115174 + 741 WP_032334797.1 conjugal transfer pilus acetylase TraX -
M1Y13_RS25580 (115229) 115229..115789 + 561 WP_061892703.1 fertility inhibition protein FinO -
M1Y13_RS25585 (115925) 115925..116137 + 213 WP_061892702.1 hypothetical protein -
M1Y13_RS25590 (116383) 116383..116843 + 461 Protein_130 thermonuclease family protein -
M1Y13_RS25595 (116889) 116889..117098 + 210 WP_061892701.1 hemolysin expression modulator Hha -
M1Y13_RS25600 (117136) 117136..117726 + 591 WP_061892700.1 DUF2726 domain-containing protein -
M1Y13_RS25605 (117966) 117966..118220 + 255 WP_000083830.1 replication regulatory protein RepA -
M1Y13_RS25610 (118458) 118458..118532 + 75 WP_061892708.1 RepA leader peptide Tap -
M1Y13_RS25615 (118525) 118525..119382 + 858 WP_061892699.1 incFII family plasmid replication initiator RepA -
M1Y13_RS25620 (120081) 120081..120239 + 159 WP_061892698.1 hypothetical protein -
M1Y13_RS25625 (120319) 120319..120972 + 654 WP_129542129.1 CPBP family intramembrane metalloprotease -
M1Y13_RS25630 (121065) 121065..121322 + 258 WP_061892696.1 type II toxin-antitoxin system antitoxin PemI -
M1Y13_RS25635 (121255) 121255..121656 + 402 WP_001398199.1 type II toxin-antitoxin system toxin endoribonuclease PemK -
M1Y13_RS25640 (122044) 122044..122340 - 297 WP_024133129.1 hypothetical protein -
M1Y13_RS25645 (122491) 122491..122592 + 102 Protein_141 type II toxin-antitoxin system RelE/ParE family toxin -
M1Y13_RS25650 (123452) 123452..124681 + 1230 WP_024227651.1 autotransporter strand-loop-strand O-heptosyltransferase -
M1Y13_RS25655 (124665) 124665..129617 + 4953 WP_263536091.1 putative autotransporter VF
M1Y13_RS25660 (129764) 129764..130024 + 261 WP_237897985.1 Cyclic di-GMP phosphodiesterase PdeL VF
M1Y13_RS25665 (130240) 130240..130296 - 57 WP_229997132.1 hypothetical protein -
M1Y13_RS25670 (131192) 131192..131456 + 265 Protein_146 IS256 family transposase IS1414 Transposase
M1Y13_RS25675 (132001) 132001..132318 + 318 WP_237897979.1 Major pilu subunit operon regulatory protein PapB VF
M1Y13_RS25680 (132446) 132446..132964 + 519 WP_032334824.1 hypothetical protein VF
M1Y13_RS25685 (133049) 133049..135454 + 2406 WP_242386888.1 Outer membrane usher protein FimD VF
M1Y13_RS25690 (135447) 135447..136139 + 693 WP_024227327.1 Chaperone protein FaeE VF
M1Y13_RS25695 (136126) 136126..136644 + 519 WP_061892257.1 fimbrial protein -
M1Y13_RS25700 (136652) 136652..137221 + 570 WP_032334819.1 hypothetical protein -
M1Y13_RS25705 (137346) 137346..138305 + 960 WP_061892258.1 hypothetical protein -
M1Y13_RS25710 (138469) 138469..139245 + 777 WP_129542132.1 EAL domain-containing protein -
M1Y13_RS25715 (139496) 139496..140089 + 594 WP_032334815.1 histidine phosphatase family protein -
M1Y13_RS25720 (140112) 140112..140276 - 165 Protein_156 IS1 family transposase -
M1Y13_RS25725 (140400) 140400..140570 - 171 Protein_157 adhesin -
M1Y13_RS25730 (140567) 140567..141112 + 546 Protein_158 IS21 family transposase ISEc12 Transposase
M1Y13_RS25735 (141127) 141127..141873 + 747 WP_129542164.1 IS21 family transposase ISEc12 Transposase
M1Y13_RS25740 (142039) 142039..143233 - 1195 Protein_160 IS91 family transposase IS91 Transposase
M1Y13_RS25745 (143233) 143233..143598 - 366 WP_061892118.1 hypothetical protein -
M1Y13_RS25750 (143808) 143808..143966 + 159 Protein_162 IS4 family transposase -
M1Y13_RS25760 (146384) 146384..147823 + 1440 WP_164997246.1 MFS transporter -
M1Y13_RS25765 (147884) 147884..149563 + 1680 WP_061892152.1 glycoside hydrolase family 43 protein -
M1Y13_RS25770 (150071) 150071..150253 + 183 Protein_166 IS3 family transposase ISEc17 Transposase
M1Y13_RS25775 (150331) 150331..150603 + 273 WP_011310366.1 hypothetical protein -
M1Y13_RS25780 (150584) 150584..151789 + 1206 Protein_168 IS91 family transposase ISSbo1 Transposase
M1Y13_RS25785 (152055) 152055..152306 + 252 WP_001132895.1 type II toxin-antitoxin system Phd/YefM family antitoxin Antitoxin Detail
M1Y13_RS25790 (152303) 152303..152590 + 288 WP_001270417.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin Detail
M1Y13_RS25795 (152592) 152592..152870 + 279 Protein_171 integrase core domain-containing protein -
M1Y13_RS25800 (153505) 153505..154482 + 978 WP_061892150.1 RepB family plasmid replication initiator protein -
M1Y13_RS25805 (154761) 154761..155501 - 741 WP_001066941.1 tyrosine-type recombinase/integrase -
M1Y13_RS25810 (156502) 156502..157203 - 702 WP_263536092.1 hypothetical protein -
M1Y13_RS25815 (157614) 157614..158183 + 570 WP_061892148.1 type 1 fimbrial protein -
M1Y13_RS25820 (158258) 158258..158968 + 711 WP_032334886.1 putative fimbrial chaperone protein ElfD VF
M1Y13_RS25825 (158934) 158934..161519 + 2586 WP_164997245.1 Outer membrane usher protein FimD VF

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance