MGE detailed information
MGE type: Prophage MGE length: 87073 bp
Accession: NZ_CP096902 Location: 2124175..2211247 Organism: Escherichia coli strain RSHH22 Replicon: chromosome
Accession: NZ_CP096902 Location: 2124175..2211247 Organism: Escherichia coli strain RSHH22 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| M1Y13_RS10415 () | 2120899..2121351 | + | 453 | WP_077221229.1 | dihydroneopterin triphosphate diphosphatase | - |
| M1Y13_RS10420 () | 2121380..2122120 | + | 741 | WP_000907234.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| M1Y13_RS10425 () | 2122155..2122676 | + | 522 | WP_001295503.1 | crossover junction endodeoxyribonuclease RuvC | - |
| M1Y13_RS10430 () | 2122678..2123280 | - | 603 | WP_001024930.1 | YebB family permuted papain-like enzyme | - |
| M1Y13_RS10435 () | 2123351..2123416 | + | 66 | WP_001386853.1 | stress response small protein YobI | - |
| M1Y13_RS10440 () | 2123555..2124166 | + | 612 | WP_000580323.1 | Holliday junction branch migration protein RuvA | - |
| M1Y13_RS10445 () | 2124175..2125185 | + | 1011 | WP_000568519.1 | Holliday junction branch migration DNA helicase RuvB | - |
| M1Y13_RS10450 () | 2125332..2126117 | - | 786 | WP_000571465.1 | hypothetical protein | VF |
| M1Y13_RS10455 () | 2126114..2126869 | - | 756 | WP_000202996.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| M1Y13_RS10460 () | 2126948..2127880 | + | 933 | WP_001342995.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| M1Y13_RS10465 () | 2127896..2129218 | + | 1323 | WP_001184045.1 | murein DD-endopeptidase MepM | - |
| M1Y13_RS10470 () | 2129338..2130309 | + | 972 | WP_000448381.1 | Lipid A biosynthesis myristoyltransferase | VF |
| M1Y13_RS10475 () | 2130440..2131882 | - | 1443 | WP_000091148.1 | pyruvate kinase | - |
| M1Y13_RS10480 () | 2132010..2132879 | - | 870 | WP_001056706.1 | DNA-binding transcriptional regulator HexR | - |
| M1Y13_RS10485 () | 2133217..2134692 | + | 1476 | WP_000301727.1 | glucose-6-phosphate dehydrogenase | - |
| M1Y13_RS10490 () | 2134927..2136738 | + | 1812 | WP_001069467.1 | phosphogluconate dehydratase | - |
| M1Y13_RS10495 () | 2136775..2137416 | + | 642 | WP_000800512.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| M1Y13_RS10500 () | 2137472..2138650 | - | 1179 | WP_000173474.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| M1Y13_RS10505 () | 2138784..2139074 | + | 291 | WP_000257738.1 | DNA damage-inducible protein YebG | - |
| M1Y13_RS10510 () | 2139141..2139497 | + | 357 | WP_001295500.1 | protein YebF | - |
| M1Y13_RS10515 () | 2139824..2140483 | + | 660 | WP_000024745.1 | tellurite resistance TerB family protein | - |
| M1Y13_RS10520 () | 2140692..2142752 | + | 2061 | WP_000936936.1 | oligopeptidase B | - |
| M1Y13_RS10525 () | 2142749..2143411 | - | 663 | WP_000944256.1 | exodeoxyribonuclease X | - |
| M1Y13_RS10530 () | 2143435..2144091 | - | 657 | WP_242386750.1 | carbon-nitrogen hydrolase family protein YobB | - |
| M1Y13_RS10535 () | 2144193..2144423 | - | 231 | WP_000916763.1 | DNA polymerase III subunit theta | - |
| M1Y13_RS10540 () | 2144562..2144936 | + | 375 | WP_000204699.1 | CopC domain-containing protein YobA | - |
| M1Y13_RS10545 () | 2144940..2145812 | + | 873 | WP_000879280.1 | copper homeostasis membrane protein CopD | - |
| M1Y13_RS10550 () | 2145825..2146166 | + | 342 | WP_000976492.1 | YebY family protein | - |
| M1Y13_RS10555 () | 2146559..2147635 | - | 1077 | WP_001189091.1 | hypothetical protein ; Integrase | Integrase |
| M1Y13_RS10560 () | 2147601..2147882 | - | 282 | WP_001311878.1 | excisionase | - |
| M1Y13_RS10565 () | 2147989..2148177 | - | 189 | WP_001356607.1 | DUF1187 family protein | - |
| - () | 2147993..2148171 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2147993..2148171 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2147993..2148171 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2147993..2148171 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| M1Y13_RS10570 () | 2148170..2148364 | - | 195 | WP_129542092.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | Toxin Detail |
| M1Y13_RS10575 () | 2148397..2149077 | - | 681 | WP_129541926.1 | YqaJ viral recombinase family protein | - |
| M1Y13_RS10580 () | 2149074..2149859 | - | 786 | WP_063119826.1 | phage recombination protein Bet | - |
| M1Y13_RS10585 () | 2149865..2150161 | - | 297 | WP_129542093.1 | host-nuclease inhibitor Gam family protein | - |
| M1Y13_RS10590 () | 2150319..2152157 | - | 1839 | Protein_2072 | hypothetical protein | - |
| M1Y13_RS10595 () | 2152256..2152531 | - | 276 | WP_001452559.1 | hypothetical protein | - |
| M1Y13_RS10600 () | 2152606..2152776 | - | 171 | WP_001359121.1 | YdaE family protein | - |
| M1Y13_RS10605 () | 2152776..2152997 | - | 222 | WP_129541924.1 | cell division protein FtsZ | - |
| M1Y13_RS10610 () | 2153417..2153569 | - | 153 | WP_001169150.1 | DUF1391 family protein | - |
| M1Y13_RS10615 () | 2153580..2153714 | - | 135 | WP_000233807.1 | hypothetical protein | - |
| M1Y13_RS10620 () | 2153965..2154426 | - | 462 | WP_000753628.1 | helix-turn-helix domain-containing protein | - |
| M1Y13_RS10625 () | 2154534..2154809 | + | 276 | WP_061892277.1 | YdaS family helix-turn-helix protein | - |
| M1Y13_RS10630 () | 2154793..2155215 | + | 423 | WP_045174332.1 | toxin YdaT family protein | - |
| M1Y13_RS10635 () | 2155235..2155648 | + | 414 | WP_040092190.1 | hypothetical protein | - |
| M1Y13_RS10640 () | 2156158..2157072 | + | 915 | WP_064055958.1 | DnaT-like ssDNA-binding domain-containing protein | - |
| M1Y13_RS10645 () | 2157065..2157526 | + | 462 | WP_001519821.1 | replication protein P | - |
| M1Y13_RS10650 () | 2157559..2158302 | + | 744 | WP_129542091.1 | DUF1627 domain-containing protein | - |
| M1Y13_RS10655 () | 2158289..2159047 | + | 759 | WP_129541922.1 | ead/Ea22-like family protein | - |
| M1Y13_RS10660 () | 2159049..2159240 | + | 192 | WP_016236813.1 | hypothetical protein | - |
| M1Y13_RS10665 () | 2159411..2159971 | + | 561 | WP_242386752.1 | DUF551 domain-containing protein | - |
| M1Y13_RS10670 () | 2159971..2160366 | + | 396 | WP_000426669.1 | hypothetical protein | - |
| M1Y13_RS10675 () | 2160652..2160807 | + | 156 | WP_000813259.1 | Hok/Gef family protein | - |
| M1Y13_RS10680 () | 2161029..2161106 | + | 78 | Protein_2090 | hypothetical protein | - |
| M1Y13_RS10685 () | 2161262..2161861 | + | 600 | WP_063116900.1 | DUF1367 family protein | - |
| M1Y13_RS10690 () | 2161861..2162151 | + | 291 | WP_000228020.1 | DUF1364 domain-containing protein | - |
| M1Y13_RS10695 () | 2162148..2162690 | + | 543 | WP_129541920.1 | DUF1133 family protein | - |
| M1Y13_RS10710 () | 2163970..2164362 | + | 393 | WP_001351476.1 | putative holin | - |
| M1Y13_RS10715 () | 2164352..2164627 | + | 276 | WP_073519705.1 | phage holin family protein | - |
| M1Y13_RS10720 () | 2164630..2165007 | + | 378 | WP_129541919.1 | M15 family metallopeptidase | - |
| M1Y13_RS10725 () | 2165049..2165204 | + | 156 | WP_164997238.1 | hypothetical protein | - |
| M1Y13_RS10730 () | 2165376..2165675 | + | 300 | WP_225384851.1 | hypothetical protein | - |
| M1Y13_RS10735 () | 2165800..2166057 | + | 258 | Protein_2099 | ParB/Srx family N-terminal domain-containing protein | - |
| M1Y13_RS10740 () | 2166581..2167513 | + | 933 | WP_129541917.1 | hypothetical protein | - |
| M1Y13_RS10745 () | 2167491..2167700 | + | 210 | WP_000126790.1 | hypothetical protein | - |
| M1Y13_RS10750 () | 2167704..2168795 | + | 1092 | WP_129541916.1 | terminase small subunit | - |
| M1Y13_RS10755 () | 2168785..2170113 | + | 1329 | WP_064226522.1 | hypothetical protein | - |
| M1Y13_RS10760 () | 2170133..2171569 | + | 1437 | WP_053507847.1 | DUF1073 domain-containing protein | - |
| M1Y13_RS10765 () | 2171514..2172347 | + | 834 | WP_174705340.1 | hypothetical protein | - |
| M1Y13_RS10770 () | 2172328..2173650 | + | 1323 | WP_129541915.1 | DUF2213 domain-containing protein | - |
| M1Y13_RS10775 () | 2173643..2174260 | + | 618 | WP_000763615.1 | hypothetical protein | - |
| M1Y13_RS10780 () | 2174275..2175303 | + | 1029 | WP_129541914.1 | hypothetical protein | - |
| M1Y13_RS10785 () | 2175361..2175831 | + | 471 | WP_129541913.1 | hypothetical protein | - |
| M1Y13_RS10790 () | 2175831..2176271 | + | 441 | WP_129541912.1 | hypothetical protein | - |
| M1Y13_RS10795 () | 2176268..2176708 | + | 441 | WP_000762302.1 | hypothetical protein | - |
| M1Y13_RS10800 () | 2176695..2177639 | + | 945 | WP_042966456.1 | hypothetical protein | - |
| M1Y13_RS10805 () | 2177639..2178976 | + | 1338 | WP_129541911.1 | hypothetical protein | - |
| M1Y13_RS10810 () | 2179000..2179431 | + | 432 | WP_000613368.1 | hypothetical protein | - |
| M1Y13_RS10815 () | 2179428..2180045 | + | 618 | WP_129541910.1 | hypothetical protein | - |
| M1Y13_RS10820 () | 2180110..2182188 | + | 2079 | WP_042966447.1 | transglycosylase SLT domain-containing protein | - |
| M1Y13_RS10825 () | 2182192..2182860 | + | 669 | WP_000056324.1 | hypothetical protein | - |
| M1Y13_RS10830 () | 2182857..2183123 | + | 267 | WP_000209261.1 | hypothetical protein | - |
| M1Y13_RS10835 () | 2183123..2184130 | + | 1008 | WP_064226513.1 | hypothetical protein | - |
| M1Y13_RS10840 () | 2184130..2184843 | + | 714 | WP_105464013.1 | phage baseplate protein | - |
| M1Y13_RS10845 () | 2185297..2185644 | + | 348 | WP_001261328.1 | hypothetical protein | - |
| M1Y13_RS10850 () | 2185620..2186177 | - | 558 | WP_129541909.1 | antA/AntB antirepressor family protein | - |
| M1Y13_RS10855 () | 2186442..2186981 | - | 540 | WP_000733801.1 | hypothetical protein | - |
| M1Y13_RS10860 () | 2187003..2188229 | + | 1227 | WP_071776729.1 | baseplate J/gp47 family protein | - |
| M1Y13_RS10865 () | 2188213..2188839 | + | 627 | WP_001199731.1 | hypothetical protein | - |
| M1Y13_RS10870 () | 2188836..2190389 | + | 1554 | WP_129541908.1 | phage tail protein | - |
| M1Y13_RS10875 () | 2190392..2190937 | + | 546 | WP_129541907.1 | tail fiber assembly protein | - |
| M1Y13_RS10880 () | 2190961..2192943 | + | 1983 | WP_263536089.1 | prophage tail fiber N-terminal domain-containing protein | - |
| M1Y13_RS10885 () | 2192954..2193493 | + | 540 | WP_250143547.1 | DUF4376 domain-containing protein | - |
| M1Y13_RS10890 () | 2193486..2193869 | + | 384 | WP_129542098.1 | DUF1353 domain-containing protein | - |
| - | 2195340..2195370 | + | 31 | - | - | Toxin Detail |
| - | 2195340..2195408 | - | 69 | - | - | Antitoxin Detail |
| M1Y13_RS10895 () | 2195505..2196161 | + | 657 | WP_000812724.1 | protein-serine/threonine phosphatase | - |
| M1Y13_RS10900 () | 2196162..2196353 | - | 192 | WP_001296140.1 | YebW family protein | - |
| M1Y13_RS10905 () | 2196458..2196694 | - | 237 | WP_001295499.1 | YebV family protein | - |
| M1Y13_RS10910 () | 2196812..2198251 | - | 1440 | WP_000057022.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| M1Y13_RS10915 () | 2198331..2200964 | - | 2634 | WP_001299674.1 | hypothetical protein | VF |
| M1Y13_RS10920 () | 2200933..2202216 | - | 1284 | WP_001207283.1 | membrane integrity lipid transport subunit YebS | - |
| M1Y13_RS10925 () | 2202346..2202843 | + | 498 | WP_001043882.1 | L-methionine (R)-S-oxide reductase | - |
| M1Y13_RS10930 () | 2202940..2203638 | + | 699 | WP_000431370.1 | RNA chaperone ProQ | - |
| M1Y13_RS10935 () | 2203658..2205706 | + | 2049 | WP_001326055.1 | carboxy terminal-processing peptidase | - |
| M1Y13_RS10940 () | 2205898..2206779 | + | 882 | WP_000984517.1 | protease HtpX | - |
| M1Y13_RS10945 () | 2206825..2208198 | - | 1374 | WP_001315678.1 | MFS transporter | - |
| M1Y13_RS10950 () | 2208375..2209166 | + | 792 | WP_001262174.1 | DNA-binding transcriptional regulator KdgR | - |
| M1Y13_RS10955 () | 2209309..2209548 | - | 240 | WP_001211011.1 | YobH family protein | - |
| M1Y13_RS10960 () | 2209707..2209850 | + | 144 | WP_000714550.1 | PhoP/PhoQ regulator MgrB | - |
| M1Y13_RS10965 () | 2209925..2210212 | + | 288 | WP_001006865.1 | YebO family protein | - |
| M1Y13_RS10970 () | 2210882..2211025 | + | 144 | WP_001295496.1 | DUF2627 domain-containing protein | - |
| M1Y13_RS10975 () | 2211038..2211247 | + | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| M1Y13_RS10980 () | 2211413..2212222 | + | 810 | WP_000010129.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| M1Y13_RS10985 () | 2212219..2212785 | - | 567 | WP_001296134.1 | manganese efflux pump MntP | - |
| M1Y13_RS10990 () | 2213214..2213672 | - | 459 | WP_000156255.1 | DUF986 family protein | - |
| M1Y13_RS10995 () | 2213727..2214578 | - | 852 | WP_000228655.1 | PTS mannose transporter subunit IID | - |
| M1Y13_RS11000 () | 2214591..2215391 | - | 801 | WP_000406926.1 | PTS mannose transporter subunit IIC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|