MGE detailed information
MGE type: Prophage MGE length: 46665 bp
Accession: NZ_CP096540 Location: 354502..401166 Organism: Staphylococcus aureus strain RIVM_M044329 Replicon: chromosome
Accession: NZ_CP096540 Location: 354502..401166 Organism: Staphylococcus aureus strain RIVM_M044329 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| M1F45_RS01550 (M1F45_01545) | 349946..350614 | + | 669 | WP_000936721.1 | N-acetylmannosamine-6-phosphate 2-epimerase | - |
| M1F45_RS01555 (M1F45_01550) | 350744..352057 | - | 1314 | WP_001077706.1 | YjiH family protein | - |
| M1F45_RS01560 (M1F45_01555) | 352474..354408 | + | 1935 | Protein_309 | YSIRK domain-containing triacylglycerol lipase Lip2/Geh | - |
| M1F45_RS01565 (M1F45_01560) | 354502..355707 | - | 1206 | WP_031795352.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| M1F45_RS01570 (M1F45_01565) | 355833..356447 | + | 615 | WP_000191466.1 | hypothetical protein | - |
| M1F45_RS01575 (M1F45_01570) | 356444..356590 | - | 147 | WP_074370993.1 | hypothetical protein | - |
| M1F45_RS01580 (M1F45_01575) | 356820..357404 | - | 585 | WP_000825948.1 | hypothetical protein | - |
| M1F45_RS01585 (M1F45_01580) | 357422..357883 | - | 462 | WP_000525004.1 | hypothetical protein | Toxin Detail |
| M1F45_RS01590 (M1F45_01585) | 357896..358210 | - | 315 | WP_000333630.1 | helix-turn-helix transcriptional regulator | Antitoxin Detail |
| M1F45_RS01595 (M1F45_01590) | 358362..358598 | + | 237 | WP_001121027.1 | helix-turn-helix transcriptional regulator | - |
| M1F45_RS01600 (M1F45_01595) | 358612..359388 | + | 777 | WP_001148544.1 | Rha family transcriptional regulator | - |
| M1F45_RS01605 (M1F45_01600) | 359417..359560 | + | 144 | WP_031797335.1 | hypothetical protein | - |
| M1F45_RS01610 (M1F45_01605) | 359550..359759 | - | 210 | WP_000642492.1 | hypothetical protein | - |
| M1F45_RS01615 (M1F45_01610) | 359815..360060 | + | 246 | WP_001025401.1 | DUF2829 domain-containing protein | Toxin Detail |
| M1F45_RS01620 (M1F45_01615) | 360029..360394 | - | 366 | WP_001128433.1 | hypothetical protein | - |
| M1F45_RS01625 (M1F45_01620) | 360449..360664 | + | 216 | WP_001097552.1 | hypothetical protein | - |
| M1F45_RS01630 (M1F45_01625) | 360689..360952 | + | 264 | WP_001124160.1 | IS3 family transposase ISVa4 | Transposase |
| M1F45_RS01635 (M1F45_01630) | 360965..361135 | + | 171 | WP_031920869.1 | DUF1270 domain-containing protein | - |
| M1F45_RS01640 (M1F45_01635) | 361116..361454 | + | 339 | WP_224727996.1 | XRE family transcriptional regulator | - |
| M1F45_RS01645 (M1F45_01640) | 361519..361821 | + | 303 | WP_031838380.1 | DUF2482 family protein | - |
| M1F45_RS01650 (M1F45_01645) | 361826..362086 | + | 261 | WP_000291481.1 | DUF1108 family protein | - |
| M1F45_RS01655 (M1F45_01650) | 362099..362635 | + | 537 | WP_000999048.1 | host-nuclease inhibitor Gam family protein | - |
| M1F45_RS01660 (M1F45_01655) | 362636..363415 | + | 780 | WP_000137071.1 | ATP-binding protein | - |
| M1F45_RS01665 (M1F45_01660) | 363445..363999 | + | 555 | WP_000704713.1 | single-stranded DNA-binding protein | - |
| M1F45_RS01670 (M1F45_01665) | 364012..364683 | + | 672 | WP_031838379.1 | putative HNHc nuclease | - |
| M1F45_RS01675 (M1F45_01670) | 364676..365431 | + | 756 | WP_001037657.1 | DnaD domain protein | - |
| M1F45_RS01680 (M1F45_01675) | 365431..365787 | + | 357 | WP_001132243.1 | hypothetical protein | - |
| M1F45_RS01685 (M1F45_01680) | 365784..367025 | + | 1242 | WP_001106166.1 | DnaB helicase C-terminal domain-containing protein | - |
| M1F45_RS01690 (M1F45_01685) | 367022..367237 | + | 216 | WP_001024405.1 | hypothetical protein | - |
| M1F45_RS01695 (M1F45_01690) | 367241..367462 | + | 222 | WP_001123688.1 | DUF3269 family protein | - |
| M1F45_RS01700 (M1F45_01695) | 367473..367877 | + | 405 | WP_000049798.1 | DUF1064 domain-containing protein | - |
| M1F45_RS01705 (M1F45_01700) | 367882..368067 | + | 186 | WP_031838378.1 | DUF3113 family protein | - |
| M1F45_RS01710 (M1F45_01705) | 368068..368427 | + | 360 | WP_031838377.1 | SA1788 family PVL leukocidin-associated protein | - |
| M1F45_RS01715 (M1F45_01710) | 368428..368676 | + | 249 | WP_031796934.1 | phi PVL orf 51-like protein | - |
| M1F45_RS01720 (M1F45_01715) | 368690..368896 | + | 207 | WP_000693987.1 | hypothetical protein | - |
| M1F45_RS01725 (M1F45_01720) | 368899..369300 | + | 402 | WP_031796932.1 | hypothetical protein | - |
| M1F45_RS01730 (M1F45_01725) | 369297..369644 | + | 348 | WP_000979209.1 | YopX family protein | - |
| M1F45_RS01735 (M1F45_01730) | 369641..369949 | + | 309 | WP_000144708.1 | hypothetical protein | - |
| M1F45_RS01740 (M1F45_01735) | 369942..370178 | + | 237 | WP_001065023.1 | DUF1024 family protein | - |
| M1F45_RS01745 (M1F45_01740) | 370183..370725 | + | 543 | WP_000185654.1 | dUTP pyrophosphatase | - |
| M1F45_RS01750 (M1F45_01745) | 370762..370998 | + | 237 | WP_000195831.1 | DUF1381 domain-containing protein | - |
| M1F45_RS01755 (M1F45_01750) | 371023..371259 | + | 237 | WP_000483477.1 | hypothetical protein | - |
| M1F45_RS01760 (M1F45_01755) | 371249..371635 | + | 387 | WP_001555739.1 | hypothetical protein | - |
| M1F45_RS01765 (M1F45_01760) | 371635..371787 | + | 153 | WP_031838395.1 | transcriptional regulator | - |
| M1F45_RS01770 (M1F45_01765) | 371855..372055 | + | 201 | WP_000265258.1 | DUF1514 family protein | - |
| M1F45_RS01775 (M1F45_01770) | 372107..374554 | + | 2448 | WP_071161937.1 | virulence-associated E family protein | - |
| M1F45_RS01780 (M1F45_01775) | 374657..374761 | - | 105 | WP_015978074.1 | hypothetical protein | - |
| M1F45_RS01785 (M1F45_01780) | 374895..375185 | + | 291 | WP_000665203.1 | VRR-NUC domain-containing protein | - |
| M1F45_RS01790 (M1F45_01785) | 375166..376533 | + | 1368 | WP_078100831.1 | DEAD/DEAH box helicase | - |
| M1F45_RS01795 (M1F45_01790) | 376546..376983 | + | 438 | WP_000513703.1 | transcriptional regulator | - |
| M1F45_RS01800 (M1F45_01795) | 377140..377454 | + | 315 | WP_000160683.1 | HNH endonuclease | - |
| M1F45_RS01805 (M1F45_01800) | 377582..377887 | + | 306 | WP_000778933.1 | P27 family phage terminase small subunit | - |
| M1F45_RS01810 (M1F45_01805) | 377877..379568 | + | 1692 | WP_031920860.1 | terminase large subunit | - |
| M1F45_RS01815 (M1F45_01810) | 379573..380811 | + | 1239 | WP_001100669.1 | phage portal protein | - |
| M1F45_RS01820 (M1F45_01815) | 380795..381568 | + | 774 | WP_000061872.1 | Clp protease ClpP | - |
| M1F45_RS01825 (M1F45_01820) | 381580..382743 | + | 1164 | WP_031903399.1 | phage major capsid protein | - |
| M1F45_RS01830 (M1F45_01825) | 382812..383090 | + | 279 | WP_000050973.1 | head-tail connector protein | - |
| M1F45_RS01835 (M1F45_01830) | 383102..383434 | + | 333 | WP_000395501.1 | hypothetical protein | - |
| M1F45_RS01840 (M1F45_01835) | 383431..383832 | + | 402 | WP_031903400.1 | hypothetical protein | - |
| M1F45_RS01845 (M1F45_01840) | 383833..384228 | + | 396 | WP_001023802.1 | DUF3168 domain-containing protein | - |
| M1F45_RS01850 (M1F45_01845) | 384263..384904 | + | 642 | WP_000807536.1 | phage tail protein | - |
| M1F45_RS01855 (M1F45_01850) | 384996..385451 | + | 456 | WP_000169128.1 | Ig-like domain-containing protein | - |
| M1F45_RS01860 (M1F45_01855) | 385509..385859 | + | 351 | WP_000589167.1 | hypothetical protein | - |
| M1F45_RS01865 (M1F45_01860) | 385901..386059 | + | 159 | WP_000438833.1 | hypothetical protein | - |
| M1F45_RS01870 (M1F45_01865) | 386073..392273 | + | 6201 | WP_181279919.1 | phage tail tape measure protein | - |
| M1F45_RS01875 (M1F45_01870) | 392273..393097 | + | 825 | WP_001190533.1 | phage tail family protein | - |
| M1F45_RS01880 (M1F45_01875) | 393106..394689 | + | 1584 | WP_000384474.1 | prophage endopeptidase tail family protein | - |
| M1F45_RS01885 (M1F45_01880) | 394689..394979 | + | 291 | WP_000179858.1 | hypothetical protein | - |
| M1F45_RS01890 (M1F45_01885) | 394995..396905 | + | 1911 | WP_000429558.1 | minor structural protein | - |
| M1F45_RS01895 (M1F45_01890) | 396905..398371 | + | 1467 | WP_021285990.1 | BppU family phage baseplate upper protein | - |
| M1F45_RS01900 (M1F45_01895) | 398371..398760 | + | 390 | WP_001166599.1 | DUF2977 domain-containing protein | - |
| M1F45_RS01905 (M1F45_01900) | 398753..398917 | + | 165 | WP_000916020.1 | XkdX family protein | - |
| M1F45_RS01910 (M1F45_01905) | 398963..399262 | + | 300 | WP_000466784.1 | DUF2951 domain-containing protein | - |
| M1F45_RS01915 (M1F45_01910) | 399398..399700 | + | 303 | WP_000339146.1 | phage holin | - |
| M1F45_RS01920 (M1F45_01915) | 399712..401166 | + | 1455 | WP_021285991.1 | N-acetylmuramoyl-L-alanine amidase | - |
| M1F45_RS01925 | 401936..402058 | + | 123 | WP_000346419.1 | hypothetical protein | - |
| M1F45_RS01930 (M1F45_01920) | 402300..403127 | - | 828 | WP_000136026.1 | alpha/beta hydrolase | - |
| M1F45_RS01935 (M1F45_01925) | 403185..404399 | - | 1215 | WP_000286472.1 | NADH-dependent flavin oxidoreductase | - |
| M1F45_RS01940 (M1F45_01930) | 404495..404587 | + | 93 | WP_014936975.1 | hypothetical protein | - |
| M1F45_RS01945 (M1F45_01935) | 404701..405702 | + | 1002 | WP_000240067.1 | LLM class flavin-dependent oxidoreductase | - |
| M1F45_RS01950 (M1F45_01940) | 405736..406068 | + | 333 | WP_000731878.1 | glycine cleavage system protein H | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|