MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 64942 bp
Accession: NZ_CP096229 Location: 1..64942 Organism: Xanthomonas citri pv. citri strain CQ13 Replicon: plasmid pXAC64
Accession: NZ_CP096229 Location: 1..64942 Organism: Xanthomonas citri pv. citri strain CQ13 Replicon: plasmid pXAC64
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| XCQ_RS22215 (XCQ_22215) | 147..353 | - | 207 | WP_011052961.1 | hypothetical protein | - |
| XCQ_RS22220 (XCQ_22220) | 403..732 | - | 330 | WP_005918642.1 | hypothetical protein | - |
| XCQ_RS22225 (XCQ_22225) | 879..1478 | + | 600 | WP_015462601.1 | hypothetical protein | - |
| XCQ_RS22230 (XCQ_22230) | 1805..2254 | + | 450 | WP_015462602.1 | hypothetical protein | - |
| XCQ_RS22235 (XCQ_22235) | 2251..2856 | + | 606 | WP_011052963.1 | M48 family metalloprotease | - |
| XCQ_RS22240 (XCQ_22240) | 2853..3347 | + | 495 | Protein_6 | hypothetical protein | - |
| XCQ_RS22245 (XCQ_22245) | 3475..3819 | - | 345 | WP_075150220.1 | hypothetical protein | - |
| XCQ_RS22250 (XCQ_22250) | 3862..5139 | - | 1278 | WP_011052966.1 | lytic murein transglycosylase | - |
| XCQ_RS22255 (XCQ_22255) | 5272..8262 | - | 2991 | WP_011052967.1 | Tn3 family transposase TnpA_TnXax1 | Transposase |
| XCQ_RS22260 (XCQ_22260) | 8270..9544 | - | 1275 | WP_011052968.1 | Tn3 family transposase tnpS_TnXax1 | Transposase |
| XCQ_RS22265 (XCQ_22265) | 9736..10791 | + | 1056 | WP_011052969.1 | Tn3 family transposase tnpT_TnXax1 | Transposase |
| XCQ_RS22270 (XCQ_22270) | 10924..12000 | + | 1077 | WP_040107542.1 | XopE/AvrPphe family type III secretion system effector | - |
| XCQ_RS22280 (XCQ_22280) | 14558..17848 | + | 3291 | WP_011052972.1 | type III secretion system effector avirulence protein AvrBs3 | - |
| XCQ_RS22285 (XCQ_22285) | 18214..19434 | - | 1221 | WP_011052942.1 | replication initiation protein | - |
| XCQ_RS22290 (XCQ_22290) | 19682..19996 | - | 315 | WP_005918227.1 | ParC family partition-associated protein | - |
| XCQ_RS22295 (XCQ_22295) | 20141..20464 | - | 324 | WP_005918229.1 | hypothetical protein | - |
| XCQ_RS22300 (XCQ_22300) | 20461..21087 | - | 627 | WP_005931726.1 | Chromosome-partitioning ATPase Soj | VF |
| XCQ_RS22305 (XCQ_22305) | 21543..21851 | + | 309 | WP_015462607.1 | hypothetical protein | - |
| XCQ_RS22310 (XCQ_22310) | 21848..22057 | + | 210 | WP_015462608.1 | helix-turn-helix transcriptional regulator | - |
| XCQ_RS22315 (XCQ_22315) | 22452..22805 | - | 354 | WP_039700904.1 | hypothetical protein | - |
| XCQ_RS22320 (XCQ_22320) | 22854..23563 | - | 710 | Protein_22 | StbB family protein | - |
| XCQ_RS22325 (XCQ_22325) | 23560..24006 | - | 447 | WP_011052937.1 | hypothetical protein | - |
| XCQ_RS22330 (XCQ_22330) | 24354..24749 | + | 396 | WP_011052973.1 | hypothetical protein | - |
| XCQ_RS22335 (XCQ_22335) | 24749..24922 | + | 174 | Protein_25 | hypothetical protein | - |
| XCQ_RS22340 (XCQ_22340) | 25014..25309 | - | 296 | Protein_26 | transposase | - |
| XCQ_RS22345 (XCQ_22345) | 25522..25977 | + | 456 | WP_011052975.1 | hypothetical protein | - |
| XCQ_RS22350 (XCQ_22350) | 26176..26517 | + | 342 | WP_031425612.1 | hypothetical protein | - |
| XCQ_RS22355 (XCQ_22355) | 26776..28350 | + | 1575 | WP_011052977.1 | type IV secretion system DNA-binding domain-containing protein | - |
| XCQ_RS22360 (XCQ_22360) | 28364..31339 | + | 2976 | WP_011052978.1 | Multifunctional conjugation protein TraI | Relaxase |
| XCQ_RS22365 (XCQ_22365) | 31393..31719 | - | 327 | WP_015462614.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| XCQ_RS22370 (XCQ_22370) | 31716..31886 | - | 171 | WP_017157755.1 | antitoxin MazE family protein | Antitoxin Detail |
| XCQ_RS22375 (XCQ_22375) | 32071..32457 | - | 387 | WP_003491149.1 | hypothetical protein | - |
| XCQ_RS22380 (XCQ_22380) | 32534..32953 | - | 420 | WP_011052981.1 | hypothetical protein | - |
| XCQ_RS22385 (XCQ_22385) | 33079..33957 | - | 879 | WP_011052982.1 | Type IV secretion system protein virB1 | VF |
| XCQ_RS22390 (XCQ_22390) | 33968..34990 | - | 1023 | WP_011052983.1 | Type IV secretion system protein VirB11 | VF |
| XCQ_RS22395 (XCQ_22395) | 35001..36221 | - | 1221 | WP_011052984.1 | Type IV secretion system protein virB10 | VF |
| XCQ_RS22400 (XCQ_22400) | 36223..37005 | - | 783 | WP_011052985.1 | Type IV secretion system protein virB9 | VF |
| XCQ_RS22405 (XCQ_22405) | 37030..37704 | - | 675 | WP_011052986.1 | type IV secretion system protein | - |
| XCQ_RS22410 (XCQ_22410) | 37701..38567 | - | 867 | WP_011052987.1 | type IV secretion system protein | - |
| XCQ_RS22415 (XCQ_22415) | 38569..38949 | - | 381 | WP_015462616.1 | hypothetical protein | - |
| XCQ_RS22420 (XCQ_22420) | 38942..39154 | - | 213 | WP_015462617.1 | hypothetical protein | - |
| XCQ_RS22425 (XCQ_22425) | 39202..39870 | - | 669 | WP_015462618.1 | type IV secretion system protein | - |
| XCQ_RS22430 (XCQ_22430) | 39867..42500 | - | 2634 | WP_011052991.1 | Type IV secretion system protein virB4 | VF |
| XCQ_RS22435 (XCQ_22435) | 42523..42822 | - | 300 | WP_003490875.1 | VirB3 family type IV secretion system protein | - |
| XCQ_RS22440 (XCQ_22440) | 42819..43196 | - | 378 | WP_011052992.1 | TrbC/VirB2 family protein | - |
| XCQ_RS22445 (XCQ_22445) | 43217..43507 | - | 291 | WP_003490957.1 | hypothetical protein | - |
| XCQ_RS22450 (XCQ_22450) | 43820..44035 | + | 216 | WP_155400515.1 | hypothetical protein | - |
| XCQ_RS22455 (XCQ_22455) | 44200..45286 | - | 1087 | Protein_49 | IS3 family transposase ISXac2 | Transposase |
| XCQ_RS22460 (XCQ_22460) | 45401..45637 | - | 237 | WP_015462622.1 | Wgr family protein | - |
| XCQ_RS22465 (XCQ_22465) | 45641..45970 | - | 330 | WP_011052996.1 | TrfB-related DNA-binding protein | - |
| XCQ_RS22470 (XCQ_22470) | 46022..47053 | - | 1032 | WP_011052997.1 | ParB/RepB/Spo0J family partition protein | - |
| XCQ_RS22475 (XCQ_22475) | 47067..47834 | - | 768 | WP_011052998.1 | ParA family protein | - |
| XCQ_RS22480 (XCQ_22480) | 48639..49865 | - | 1227 | WP_015472949.1 | replication protein RepA | - |
| XCQ_RS22485 (XCQ_22485) | 50145..51332 | - | 1188 | WP_011053001.1 | zeta toxin family protein | - |
| XCQ_RS22490 (XCQ_22490) | 51339..51602 | - | 264 | WP_005917846.1 | hypothetical protein | - |
| XCQ_RS22495 (XCQ_22495) | 51627..52028 | - | 402 | WP_011053002.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| XCQ_RS22500 (XCQ_22500) | 52025..52285 | - | 261 | WP_011053003.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| XCQ_RS22505 (XCQ_22505) | 52476..53048 | + | 573 | WP_011053004.1 | Tn3 family transposase ISPsy42 | Transposase |
| XCQ_RS22510 (XCQ_22510) | 53079..53689 | - | 611 | Protein_60 | IS3 family transposase | - |
| XCQ_RS22515 (XCQ_22515) | 55243..58734 | + | 3492 | WP_011053008.1 | type III secretion system effector avirulence protein AvrBs3 | - |
| XCQ_RS22520 (XCQ_22520) | 58848..58979 | - | 132 | Protein_62 | IS3 family transposase | - |
| XCQ_RS22525 (XCQ_22525) | 59024..59491 | - | 468 | WP_082243724.1 | UPF0149 family protein | - |
| XCQ_RS22530 (XCQ_22530) | 59385..62462 | - | 3078 | WP_234705865.1 | Tn3 family transposase TnpA_ISXc4 | Transposase |
| XCQ_RS22535 (XCQ_22535) | 62467..62886 | - | 420 | WP_003491210.1 | putative toxin-antitoxin system toxin component, PIN family | - |
| XCQ_RS22540 (XCQ_22540) | 62886..63125 | - | 240 | WP_003491212.1 | ribbon-helix-helix domain-containing protein | - |
| XCQ_RS22545 (XCQ_22545) | 63339..64262 | + | 924 | WP_003491216.1 | Tn3 family transposase TnpR_ISXc4 | Transposase |
| XCQ_RS22550 (XCQ_22550) | 64306..64488 | + | 183 | Protein_68 | helix-turn-helix domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|