MGE detailed information
MGE type: Genomic_island MGE length: 26521 bp
Accession: NZ_CP096227 Location: 2828310..2854830 Organism: Xanthomonas citri pv. citri strain CQ13 Replicon: chromosome
Accession: NZ_CP096227 Location: 2828310..2854830 Organism: Xanthomonas citri pv. citri strain CQ13 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| XCQ_RS12365 (XCQ_12365) | 2825232..2825408 | - | 177 | WP_011051567.1 | DUF3606 domain-containing protein | - |
| XCQ_RS12370 (XCQ_12370) | 2825628..2826029 | + | 402 | WP_003485983.1 | H-NS family nucleoid-associated regulatory protein | - |
| XCQ_RS12380 (XCQ_12380) | 2826318..2827409 | + | 1092 | WP_015463304.1 | site-specific integrase | - |
| XCQ_RS12385 (XCQ_12385) | 2828310..2830481 | + | 2172 | WP_011051569.1 | DotA/TraY family protein | - |
| XCQ_RS12390 (XCQ_12390) | 2830491..2831012 | + | 522 | WP_011051570.1 | hypothetical protein | - |
| XCQ_RS12395 (XCQ_12395) | 2831877..2832833 | - | 957 | WP_011051571.1 | hypothetical protein | - |
| XCQ_RS12400 (XCQ_12400) | 2832900..2834033 | - | 1134 | Protein_2422 | IS5 family transposase ISXo4 | Transposase |
| XCQ_RS12410 (XCQ_12410) | 2835373..2835627 | - | 255 | WP_223293127.1 | hypothetical protein | - |
| XCQ_RS22605 | 2835696..2835830 | - | 135 | WP_011051575.1 | hypothetical protein | - |
| XCQ_RS12415 (XCQ_12415) | 2835823..2836137 | - | 315 | WP_015463310.1 | hypothetical protein | - |
| XCQ_RS12420 (XCQ_12420) | 2836140..2836391 | - | 252 | WP_230598886.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| XCQ_RS12425 (XCQ_12425) | 2836418..2836696 | - | 279 | WP_040259533.1 | CopG family ribbon-helix-helix protein | Antitoxin Detail |
| XCQ_RS12430 (XCQ_12430) | 2836866..2838134 | - | 1269 | Protein_2429 | Tn3 family transposase ISPsy42 | Transposase |
| XCQ_RS12435 (XCQ_12435) | 2838183..2839408 | + | 1226 | Protein_2430 | IS3 family transposase ISJsp1 | Transposase |
| XCQ_RS12440 (XCQ_12440) | 2840044..2840751 | + | 708 | Protein_2431 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| XCQ_RS12445 (XCQ_12445) | 2841172..2843280 | + | 2109 | WP_011051581.1 | AAA family ATPase | - |
| XCQ_RS12450 (XCQ_12450) | 2843352..2843519 | + | 168 | WP_227893452.1 | plasmid-related protein | - |
| XCQ_RS12455 (XCQ_12455) | 2843516..2845102 | + | 1587 | WP_011051583.1 | N-6 DNA methylase | - |
| XCQ_RS12460 (XCQ_12460) | 2845099..2846016 | + | 918 | WP_011051584.1 | XamI family restriction endonuclease | - |
| XCQ_RS12465 (XCQ_12465) | 2846025..2846354 | + | 330 | WP_015463316.1 | hypothetical protein | - |
| XCQ_RS12470 (XCQ_12470) | 2846461..2846868 | + | 408 | Protein_2437 | plasmid pRiA4b ORF-3 family protein | - |
| XCQ_RS22610 | 2847260..2847391 | - | 132 | WP_108722281.1 | hypothetical protein | - |
| XCQ_RS12475 (XCQ_12475) | 2848021..2848281 | + | 261 | WP_015463320.1 | hypothetical protein | - |
| XCQ_RS12480 (XCQ_12480) | 2848680..2849681 | - | 1002 | WP_011051588.1 | replication protein RepA | - |
| XCQ_RS12485 (XCQ_12485) | 2849914..2850147 | + | 234 | WP_040107635.1 | hypothetical protein | - |
| XCQ_RS12490 (XCQ_12490) | 2850726..2852120 | + | 1395 | WP_011051590.1 | SIR2 family protein | - |
| XCQ_RS12495 (XCQ_12495) | 2852117..2854234 | + | 2118 | WP_015463321.1 | ATP-binding protein | - |
| XCQ_RS12500 (XCQ_12500) | 2854654..2854830 | + | 177 | WP_003485979.1 | hypothetical protein | - |
| XCQ_RS12505 (XCQ_12505) | 2855113..2856219 | + | 1107 | WP_016849926.1 | diguanylate cyclase | - |
| XCQ_RS12510 (XCQ_12510) | 2856262..2856771 | - | 510 | WP_011051594.1 | chemotaxis protein CheW | - |
| XCQ_RS12515 (XCQ_12515) | 2856783..2858441 | - | 1659 | WP_011051595.1 | methyl-accepting chemotaxis protein | - |
| XCQ_RS12520 (XCQ_12520) | 2858737..2859357 | + | 621 | WP_011051596.1 | DNA-3-methyladenine glycosylase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Xanthomonas axonopodis pv. citri str. 306 | Genomic island | TA20720 | NC_003919 | 2820490..2847010 | 0 |