MGE detailed information
MGE type: Mobilizable plasmid MGE length: 144572 bp
Accession: NZ_CP095788 Location: 1..144572 Organism: Escherichia fergusonii strain EF21JD053 Replicon: plasmid pJD053-144K
Accession: NZ_CP095788 Location: 1..144572 Organism: Escherichia fergusonii strain EF21JD053 Replicon: plasmid pJD053-144K
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MYB88_RS22360 (MYB88_22355) | 1..861 | + | 861 | WP_001076427.1 | replication protein RepA | - |
| MYB88_RS22365 (MYB88_22360) | 1419..2615 | + | 1197 | WP_001285362.1 | AAA family ATPase | - |
| MYB88_RS22370 (MYB88_22365) | 2632..3633 | + | 1002 | WP_000038866.1 | ParB family protein | - |
| MYB88_RS22375 (MYB88_22370) | 3859..5565 | + | 1707 | WP_000067710.1 | hypothetical protein | - |
| MYB88_RS22380 (MYB88_22375) | 5625..7214 | + | 1590 | WP_069723237.1 | hypothetical protein | - |
| MYB88_RS22385 (MYB88_22380) | 7224..8039 | + | 816 | WP_069723236.1 | hypothetical protein | - |
| MYB88_RS22390 (MYB88_22385) | 8075..8656 | + | 582 | WP_000035301.1 | hypothetical protein | - |
| MYB88_RS22395 (MYB88_22390) | 8668..9177 | + | 510 | WP_001615627.1 | hypothetical protein | - |
| MYB88_RS22400 (MYB88_22395) | 9349..9945 | + | 597 | WP_000268410.1 | hypothetical protein | - |
| MYB88_RS22405 (MYB88_22400) | 10234..10521 | + | 288 | WP_001561122.1 | DUF3892 domain-containing protein | - |
| MYB88_RS22410 (MYB88_22405) | 10592..11647 | - | 1056 | WP_050153522.1 | ParA family protein | - |
| MYB88_RS22415 (MYB88_22410) | 11911..12756 | - | 846 | WP_247859134.1 | Replication protein repL | - |
| MYB88_RS22420 (MYB88_22415) | 12786..13586 | - | 801 | WP_001187880.1 | phage antirepressor KilAC domain-containing protein | - |
| MYB88_RS22425 (MYB88_22420) | 13755..14798 | - | 1044 | WP_104920439.1 | phage antirepressor KilAC domain-containing protein | - |
| MYB88_RS22430 (MYB88_22425) | 14795..15016 | - | 222 | WP_000245709.1 | host cell division inhibitor Icd-like protein | - |
| MYB88_RS22435 (MYB88_22430) | 15638..16150 | + | 513 | WP_000039791.1 | hypothetical protein | - |
| MYB88_RS22440 (MYB88_22435) | 16154..16693 | + | 540 | WP_001033469.1 | DUF5384 family protein | - |
| MYB88_RS22445 (MYB88_22440) | 16774..17340 | + | 567 | WP_000188923.1 | hypothetical protein | - |
| MYB88_RS22450 (MYB88_22445) | 17351..17962 | + | 612 | WP_001697755.1 | hypothetical protein | - |
| MYB88_RS22455 (MYB88_22450) | 17977..18858 | + | 882 | WP_208634932.1 | morphogenetic protein | - |
| MYB88_RS22460 (MYB88_22455) | 18940..22260 | + | 3321 | WP_247859135.1 | transglycosylase SLT domain-containing protein | - |
| MYB88_RS22465 (MYB88_22460) | 22260..22616 | + | 357 | WP_000002800.1 | hypothetical protein | - |
| MYB88_RS22470 (MYB88_22465) | 22613..24046 | + | 1434 | WP_000047923.1 | bleomycin hydrolase | - |
| MYB88_RS22475 (MYB88_22470) | 24046..24882 | + | 837 | WP_029402547.1 | hypothetical protein | - |
| MYB88_RS22480 (MYB88_22475) | 24961..25395 | + | 435 | WP_029402546.1 | hypothetical protein | - |
| MYB88_RS22485 (MYB88_22480) | 25407..28373 | + | 2967 | WP_198472184.1 | phage tail protein | - |
| MYB88_RS22490 (MYB88_22485) | 28377..28904 | + | 528 | WP_029402732.1 | tail fiber assembly protein | - |
| MYB88_RS22495 (MYB88_22490) | 28933..29466 | - | 534 | WP_029402731.1 | tail fiber assembly protein | - |
| MYB88_RS22500 (MYB88_22495) | 29469..30935 | - | 1467 | WP_247859138.1 | phage tail protein | - |
| MYB88_RS22505 (MYB88_22500) | 31031..31591 | - | 561 | WP_029401675.1 | Tn3 family transposase TnpR_ISPa38 | Transposase |
| MYB88_RS22510 (MYB88_22505) | 31719..32000 | + | 282 | WP_000332810.1 | phage holin family protein | - |
| MYB88_RS22515 (MYB88_22510) | 32068..32397 | + | 330 | WP_000887652.1 | phage holin family protein | - |
| MYB88_RS22520 (MYB88_22515) | 32394..32837 | + | 444 | WP_110101939.1 | lysis protein | - |
| MYB88_RS22525 (MYB88_22520) | 32824..33426 | + | 603 | WP_000164724.1 | hypothetical protein | - |
| MYB88_RS22530 (MYB88_22525) | 33428..35347 | + | 1920 | WP_199266155.1 | hypothetical protein | - |
| MYB88_RS22535 (MYB88_22530) | 35344..35709 | + | 366 | WP_110101932.1 | ddrA | - |
| MYB88_RS22540 (MYB88_22535) | 35722..38709 | + | 2988 | WP_247859136.1 | hypothetical protein | - |
| MYB88_RS22545 (MYB88_22540) | 38699..39007 | + | 309 | WP_110101930.1 | hypothetical protein | - |
| MYB88_RS22550 (MYB88_22545) | 39214..39582 | + | 369 | WP_000339558.1 | hypothetical protein | - |
| MYB88_RS22555 (MYB88_22550) | 39790..41145 | - | 1356 | WP_033551022.1 | anti-phage deoxyguanosine triphosphatase | - |
| MYB88_RS22560 (MYB88_22555) | 41394..41882 | - | 489 | WP_097466787.1 | single-stranded DNA-binding protein | - |
| MYB88_RS22565 (MYB88_22560) | 42051..42608 | + | 558 | WP_024175649.1 | lysozyme | - |
| MYB88_RS22570 (MYB88_22565) | 42900..43919 | - | 1020 | WP_000132937.1 | head processing protein | - |
| MYB88_RS22575 (MYB88_22570) | 43912..45621 | - | 1710 | WP_110101912.1 | phage portal protein | - |
| MYB88_RS22580 (MYB88_22575) | 45697..52464 | + | 6768 | WP_247859137.1 | N-6 DNA methylase | - |
| MYB88_RS22585 (MYB88_22580) | 52498..52938 | + | 441 | WP_000224043.1 | hypothetical protein | - |
| MYB88_RS22590 (MYB88_22585) | 52935..53183 | + | 249 | WP_000747846.1 | hypothetical protein | - |
| MYB88_RS22595 (MYB88_22590) | 53235..54542 | - | 1308 | WP_208634942.1 | SIR2 family protein | - |
| MYB88_RS22600 (MYB88_22595) | 54599..55240 | - | 642 | WP_208634943.1 | maturation control protein | - |
| MYB88_RS22605 (MYB88_22600) | 55429..55989 | - | 561 | WP_208634944.1 | Ref family protein | - |
| MYB88_RS22610 (MYB88_22605) | 56236..56547 | - | 312 | WP_016246567.1 | hypothetical protein | - |
| MYB88_RS22615 (MYB88_22610) | 56598..57629 | - | 1032 | WP_000067534.1 | site-specific integrase | - |
| MYB88_RS22620 (MYB88_22615) | 57637..57858 | - | 222 | WP_000542385.1 | hypothetical protein | - |
| MYB88_RS22625 (MYB88_22620) | 58463..58672 | + | 210 | WP_000874154.1 | hypothetical protein | - |
| MYB88_RS22630 (MYB88_22625) | 58783..59634 | + | 852 | WP_000611656.1 | phage repressor protein C1 | - |
| MYB88_RS22635 (MYB88_22630) | 59659..61143 | - | 1485 | WP_000124159.1 | hypothetical protein | - |
| MYB88_RS22640 (MYB88_22635) | 61143..62336 | - | 1194 | WP_000219605.1 | terminase | - |
| MYB88_RS22645 (MYB88_22640) | 62423..62875 | - | 453 | WP_001312282.1 | late promoter-activating protein (Gp10) | - |
| MYB88_RS22650 (MYB88_22645) | 62964..64007 | - | 1044 | WP_000648827.1 | DUF968 domain-containing protein | - |
| MYB88_RS22655 (MYB88_22650) | 64035..64214 | - | 180 | WP_078182672.1 | PdcA protein | - |
| MYB88_RS22660 (MYB88_22655) | 64219..64599 | - | 381 | WP_001216034.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| MYB88_RS22665 (MYB88_22660) | 64599..64820 | - | 222 | WP_001190712.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| MYB88_RS22670 (MYB88_22665) | 64893..65282 | - | 390 | WP_000506730.1 | S24 family peptidase | - |
| MYB88_RS22675 (MYB88_22670) | 65457..65813 | + | 357 | WP_208634916.1 | DNA-binding protein | - |
| MYB88_RS22680 (MYB88_22675) | 65810..66028 | + | 219 | WP_208634917.1 | hypothetical protein | - |
| MYB88_RS22685 (MYB88_22680) | 66029..66385 | + | 357 | WP_001062545.1 | hypothetical protein | - |
| MYB88_RS22690 (MYB88_22685) | 67461..67823 | - | 363 | WP_208634918.1 | hypothetical protein | - |
| MYB88_RS22695 (MYB88_22690) | 68666..68773 | - | 108 | Protein_67 | hypothetical protein | - |
| MYB88_RS22700 (MYB88_22695) | 68984..69118 | - | 135 | Protein_68 | hypothetical protein | - |
| MYB88_RS22705 (MYB88_22700) | 69115..69480 | - | 366 | WP_001229294.1 | HNH endonuclease signature motif containing protein | - |
| MYB88_RS22710 (MYB88_22705) | 69482..69700 | - | 219 | WP_114211923.1 | DUF4014 family protein | - |
| MYB88_RS22715 (MYB88_22710) | 69702..69890 | - | 189 | WP_000797279.1 | hypothetical protein | - |
| MYB88_RS22720 (MYB88_22715) | 70015..70371 | - | 357 | WP_114211922.1 | hypothetical protein | - |
| MYB88_RS25565 | 70373..71004 | - | 632 | Protein_73 | ead/Ea22-like family protein | - |
| MYB88_RS22730 (MYB88_22725) | 71001..71240 | - | 240 | WP_208634919.1 | hypothetical protein | - |
| MYB88_RS22735 (MYB88_22730) | 71233..71436 | - | 204 | WP_000158003.1 | hypothetical protein | - |
| MYB88_RS22740 (MYB88_22735) | 71520..72248 | - | 729 | WP_000675639.1 | hypothetical protein | - |
| MYB88_RS22745 (MYB88_22740) | 72443..72949 | - | 507 | WP_208634920.1 | 3'-phosphatase | - |
| MYB88_RS22750 (MYB88_22745) | 73023..74285 | - | 1263 | WP_208634921.1 | hypothetical protein | - |
| MYB88_RS22755 (MYB88_22750) | 74587..75288 | - | 702 | WP_000684845.1 | hypothetical protein | - |
| MYB88_RS22760 (MYB88_22755) | 75285..75962 | - | 678 | WP_001354545.1 | metallophosphoesterase | - |
| MYB88_RS22765 (MYB88_22760) | 75959..76585 | - | 627 | WP_000484110.1 | hypothetical protein | - |
| MYB88_RS22770 (MYB88_22765) | 77087..77242 | - | 156 | WP_000095380.1 | hypothetical protein | - |
| MYB88_RS22775 (MYB88_22770) | 77309..77887 | - | 579 | WP_029401427.1 | VRR-NUC domain-containing protein | - |
| MYB88_RS22780 (MYB88_22775) | 77890..78135 | - | 246 | WP_000840930.1 | hypothetical protein | - |
| MYB88_RS22785 (MYB88_22780) | 78282..78659 | + | 378 | WP_000235786.1 | hypothetical protein | - |
| MYB88_RS22790 (MYB88_22785) | 78669..79886 | + | 1218 | WP_001141901.1 | hypothetical protein | - |
| MYB88_RS22795 (MYB88_22790) | 79890..80618 | + | 729 | WP_000896801.1 | hypothetical protein | - |
| MYB88_RS22800 (MYB88_22795) | 80605..81390 | + | 786 | WP_029401429.1 | hypothetical protein | - |
| MYB88_RS22805 (MYB88_22800) | 81392..82408 | + | 1017 | WP_000212018.1 | hypothetical protein | - |
| MYB88_RS22810 (MYB88_22805) | 82401..83033 | + | 633 | WP_000535203.1 | hypothetical protein | - |
| MYB88_RS22815 (MYB88_22810) | 83080..84078 | - | 999 | WP_063112851.1 | hypothetical protein | - |
| MYB88_RS22820 (MYB88_22815) | 84078..84251 | - | 174 | Protein_92 | DnaB-like helicase C-terminal domain-containing protein | - |
| MYB88_RS22830 (MYB88_22825) | 85020..86219 | - | 1200 | Protein_94 | replicative DNA helicase | - |
| MYB88_RS22840 (MYB88_22835) | 86687..86851 | - | 165 | WP_000234829.1 | DUF3927 family protein | - |
| MYB88_RS22845 (MYB88_22840) | 86851..87276 | - | 426 | WP_000900640.1 | tellurite/colicin resistance protein | - |
| MYB88_RS22860 (MYB88_22855) | 89032..91296 | - | 2265 | WP_068880393.1 | Dam family site-specific DNA-(adenine-N6)-methyltransferase | - |
| MYB88_RS22865 (MYB88_22860) | 91293..91730 | - | 438 | Protein_98 | recombination-associated protein RdgC | - |
| MYB88_RS22870 (MYB88_22865) | 91845..92033 | + | 189 | WP_000957857.1 | hypothetical protein | - |
| MYB88_RS22875 (MYB88_22870) | 92043..93242 | + | 1200 | WP_000948429.1 | IS91 family transposase ISSbo1 | Transposase |
| MYB88_RS22880 (MYB88_22875) | 94366..94900 | - | 535 | Protein_101 | IS630 family transposase | - |
| MYB88_RS22885 (MYB88_22880) | 95351..95623 | - | 273 | WP_022630248.1 | hypothetical protein | VF |
| MYB88_RS22895 (MYB88_22890) | 96847..98427 | - | 1581 | WP_000381478.1 | IS66 family transposase ISCro1 | Transposase |
| MYB88_RS22900 (MYB88_22895) | 98660..98990 | - | 331 | Protein_104 | recombinase family protein | - |
| MYB88_RS22905 (MYB88_22900) | 99235..99855 | + | 621 | WP_000864790.1 | ParA family protein | - |
| MYB88_RS22910 (MYB88_22905) | 99906..100136 | + | 231 | WP_000051067.1 | plasmid partition protein ParG | - |
| MYB88_RS22915 (MYB88_22910) | 100327..100643 | - | 317 | Protein_107 | hypothetical protein | - |
| MYB88_RS22920 (MYB88_22915) | 100683..101519 | - | 837 | WP_002433426.1 | replication initiation protein | - |
| MYB88_RS22925 (MYB88_22920) | 102905..103240 | - | 336 | WP_024133211.1 | hypothetical protein | - |
| MYB88_RS22930 (MYB88_22925) | 103475..103807 | + | 333 | WP_001284001.1 | IncI1-type relaxosome accessory protein NikA | - |
| MYB88_RS22935 (MYB88_22930) | 103818..106526 | + | 2709 | WP_125401188.1 | Protein TraI | Relaxase |
| MYB88_RS22940 (MYB88_22935) | 106566..107057 | - | 492 | Protein_112 | IS6 family transposase | - |
| MYB88_RS22945 (MYB88_22940) | 107046..107318 | - | 273 | Protein_113 | IS3 family transposase | - |
| MYB88_RS22950 (MYB88_22945) | 107452..107574 | + | 123 | Protein_114 | MbeD family mobilization/exclusion protein | - |
| MYB88_RS22955 (MYB88_22950) | 107634..108482 | - | 849 | Protein_115 | IS66 family transposase ISShdy2 | Transposase |
| MYB88_RS25570 | 108479..108629 | - | 151 | Protein_116 | hypothetical protein | - |
| MYB88_RS22960 (MYB88_22955) | 108582..108812 | - | 231 | WP_252990174.1 | IS66 family transposase ISShdy2 | Transposase |
| MYB88_RS22965 (MYB88_22960) | 109690..110340 | + | 651 | Protein_118 | IS3 family transposase ISKpn38 | Transposase |
| MYB88_RS22970 (MYB88_22965) | 110618..111214 | - | 597 | Protein_119 | IS66 family transposase ISCro1 | Transposase |
| MYB88_RS22975 (MYB88_22970) | 111304..111732 | - | 429 | Protein_120 | hypothetical protein | - |
| MYB88_RS22980 (MYB88_22975) | 112791..113009 | + | 219 | WP_000813630.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| MYB88_RS22985 (MYB88_22980) | 113011..113316 | + | 306 | WP_001159869.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| MYB88_RS22990 (MYB88_22985) | 113317..113517 | + | 201 | Protein_123 | phage integrase family protein | - |
| MYB88_RS22995 (MYB88_22990) | 113502..114413 | - | 912 | WP_000549737.1 | DMT family transporter | - |
| MYB88_RS23000 (MYB88_22995) | 114530..114667 | + | 138 | Protein_125 | Lrp/AsnC family transcriptional regulator | - |
| MYB88_RS23005 (MYB88_23000) | 114667..115716 | + | 1050 | Protein_126 | IS4 family transposase ISCro3 | Transposase |
| MYB88_RS23010 (MYB88_23005) | 115816..117189 | - | 1374 | WP_000244368.1 | IS4 family transposase ISEc13 | Transposase |
| MYB88_RS23015 (MYB88_23010) | 117401..117835 | - | 435 | WP_000525034.1 | IS200-IS605 family transposase ISSod23 | Transposase |
| MYB88_RS23020 (MYB88_23015) | 118680..122318 | + | 3639 | WP_125282792.1 | Ig-like domain-containing protein | - |
| MYB88_RS23025 (MYB88_23020) | 122519..122656 | + | 138 | Protein_130 | IS3 family transposase | - |
| MYB88_RS23030 (MYB88_23025) | 122826..123671 | - | 846 | WP_158522433.1 | Cyclic di-GMP phosphodiesterase PdeL | VF |
| MYB88_RS23035 (MYB88_23030) | 124148..124355 | + | 208 | Protein_132 | IS66 family transposase zinc-finger binding domain-containing protein | - |
| MYB88_RS23040 (MYB88_23035) | 124385..124975 | - | 591 | Protein_133 | IS6 family transposase | - |
| MYB88_RS23045 (MYB88_23040) | 125084..125486 | + | 403 | Protein_134 | IS110 family transposase ISSm3 | Transposase |
| MYB88_RS23050 (MYB88_23045) | 125614..125934 | + | 321 | WP_000273115.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| MYB88_RS23055 (MYB88_23050) | 125924..126208 | + | 285 | WP_000974937.1 | helix-turn-helix transcriptional regulator | - |
| MYB88_RS23060 (MYB88_23055) | 127126..127557 | + | 432 | Protein_137 | IS3 family transposase ISEc48 | Transposase |
| MYB88_RS23065 (MYB88_23060) | 127961..128419 | + | 459 | WP_012512780.1 | hypothetical protein | - |
| MYB88_RS23070 (MYB88_23065) | 128419..129216 | + | 798 | WP_002433409.1 | hypothetical protein | - |
| MYB88_RS23075 (MYB88_23070) | 129213..130442 | + | 1230 | WP_000838352.1 | hypothetical protein | - |
| MYB88_RS23080 (MYB88_23075) | 130466..131701 | + | 1236 | WP_158522432.1 | HlyD family efflux transporter periplasmic adaptor subunit | - |
| MYB88_RS23085 (MYB88_23080) | 131708..132142 | + | 435 | WP_000900356.1 | hypothetical protein | - |
| MYB88_RS23090 (MYB88_23085) | 132148..134112 | + | 1965 | WP_000903960.1 | ATP-binding cassette domain-containing protein | - |
| MYB88_RS23095 (MYB88_23090) | 134745..135096 | + | 352 | Protein_144 | IS4 family transposase | - |
| MYB88_RS23100 (MYB88_23095) | 135242..135499 | + | 258 | WP_024133204.1 | replication regulatory protein RepA | - |
| MYB88_RS23105 (MYB88_23100) | 135707..135781 | + | 75 | WP_071779410.1 | RepA leader peptide Tap | - |
| MYB88_RS23110 (MYB88_23105) | 135774..136631 | + | 858 | WP_000137912.1 | incFII family plasmid replication initiator RepA | - |
| MYB88_RS23115 (MYB88_23110) | 137713..139353 | + | 1641 | WP_000259343.1 | Methyl-accepting chemotaxis protein I | VF |
| MYB88_RS23120 (MYB88_23115) | 139654..139842 | + | 189 | WP_000957857.1 | hypothetical protein | - |
| MYB88_RS23125 (MYB88_23120) | 139852..141051 | + | 1200 | WP_000948429.1 | IS91 family transposase ISSbo1 | Transposase |
| MYB88_RS23130 (MYB88_23125) | 141207..141695 | - | 489 | WP_247859133.1 | recombination-associated protein RdgC | - |
| MYB88_RS23135 (MYB88_23130) | 141688..141972 | - | 285 | WP_001177860.1 | hypothetical protein | - |
| MYB88_RS23140 (MYB88_23135) | 142435..143223 | + | 789 | WP_000890198.1 | hypothetical protein | - |
| MYB88_RS23145 (MYB88_23140) | 143263..143685 | + | 423 | WP_000007769.1 | hypothetical protein | - |
| MYB88_RS23150 (MYB88_23145) | 143711..143851 | + | 141 | WP_000336812.1 | hypothetical protein | - |
| MYB88_RS23155 (MYB88_23150) | 143863..144255 | + | 393 | WP_001281116.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|