MGE detailed information
MGE type: Conjugative plasmid MGE length: 74318 bp
Accession: NZ_CP095524 Location: 1..74318 Organism: Escherichia coli strain GN04171 Replicon: plasmid p4171-2
Accession: NZ_CP095524 Location: 1..74318 Organism: Escherichia coli strain GN04171 Replicon: plasmid p4171-2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MW404_RS24880 (1) | 1..529 | - | 529 | Protein_0 | plasmid segregation protein ParM | - |
| MW404_RS24885 (677) | 677..970 | + | 294 | WP_002430945.1 | hypothetical protein | - |
| MW404_RS24890 (1065) | 1065..1967 | + | 903 | WP_077759229.1 | DUF1281 domain-containing protein | - |
| MW404_RS24895 (1964) | 1964..2275 | + | 312 | WP_001310011.1 | hypothetical protein | - |
| MW404_RS24900 (2351) | 2351..3034 | + | 684 | WP_000086169.1 | DNA methylase | - |
| MW404_RS24905 (3035) | 3035..3256 | + | 222 | WP_001104873.1 | hypothetical protein | - |
| MW404_RS24910 (3186) | 3186..3704 | + | 519 | WP_227910476.1 | DUF1380 family protein | - |
| MW404_RS24915 (3749) | 3749..4519 | + | 771 | WP_001004562.1 | hypothetical protein | - |
| MW404_RS24920 (4935) | 4935..5360 | + | 426 | WP_001198915.1 | antirestriction protein | - |
| MW404_RS24925 (5407) | 5407..5826 | + | 420 | WP_000271737.1 | DUF1380 family protein | - |
| MW404_RS24930 (5826) | 5826..6017 | + | 192 | WP_001027049.1 | hypothetical protein | - |
| MW404_RS24935 (5996) | 5996..6467 | - | 472 | Protein_11 | hypothetical protein | - |
| MW404_RS24940 (6985) | 6985..7215 | + | 231 | WP_000218644.1 | hypothetical protein | - |
| MW404_RS24945 (7267) | 7267..8628 | + | 1362 | WP_000170705.1 | DUF3560 domain-containing protein | - |
| MW404_RS24950 (8675) | 8675..9238 | + | 564 | WP_001309257.1 | class I SAM-dependent methyltransferase | - |
| MW404_RS24955 (9324) | 9324..9755 | - | 432 | Protein_15 | hypothetical protein | - |
| MW404_RS24960 (10057) | 10057..10584 | + | 528 | WP_000290834.1 | single-stranded DNA-binding protein | - |
| MW404_RS24965 (10642) | 10642..10875 | + | 234 | WP_000006003.1 | DUF905 family protein | - |
| MW404_RS24970 (10936) | 10936..12900 | + | 1965 | WP_000117316.1 | ParB/RepB/Spo0J family partition protein | - |
| MW404_RS24975 (12969) | 12969..13403 | + | 435 | WP_000845953.1 | conjugation system SOS inhibitor PsiB | - |
| MW404_RS24980 (13400) | 13400..14162 | + | 763 | Protein_20 | plasmid SOS inhibition protein A | - |
| MW404_RS24985 (14140) | 14140..14319 | - | 180 | WP_001309233.1 | hypothetical protein | - |
| - (14131) | 14131..14355 | + | 225 | NuclAT_0 | - | - |
| - (14131) | 14131..14355 | + | 225 | NuclAT_0 | - | - |
| - (14131) | 14131..14355 | + | 225 | NuclAT_0 | - | - |
| - (14131) | 14131..14355 | + | 225 | NuclAT_0 | - | - |
| MW404_RS24990 (14341) | 14341..14490 | + | 150 | Protein_22 | plasmid maintenance protein Mok | - |
| MW404_RS24995 (14432) | 14432..14557 | + | 126 | WP_001372321.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| MW404_RS25000 (14876) | 14876..15173 | - | 298 | Protein_24 | hypothetical protein | - |
| MW404_RS25005 (15473) | 15473..15769 | + | 297 | WP_001272251.1 | hypothetical protein | - |
| MW404_RS25010 (15880) | 15880..16701 | + | 822 | WP_001234445.1 | DUF932 domain-containing protein | - |
| MW404_RS25015 (16998) | 16998..17600 | - | 603 | Protein_27 | hypothetical protein | VF |
| MW404_RS25020 (17921) | 17921..18304 | + | 384 | WP_001151538.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| MW404_RS25025 (18491) | 18491..19180 | + | 690 | WP_016239105.1 | conjugal transfer transcriptional regulator TraJ | - |
| MW404_RS25030 (19273) | 19273..19674 | + | 402 | WP_001369361.1 | conjugal transfer relaxosome DNA-bindin protein TraY | - |
| MW404_RS25035 (19707) | 19707..20066 | + | 360 | WP_019842162.1 | type IV conjugative transfer system pilin TraA | - |
| MW404_RS25040 (20081) | 20081..20392 | + | 312 | WP_000012113.1 | type IV conjugative transfer system protein TraL | - |
| MW404_RS25045 (20414) | 20414..20980 | + | 567 | WP_268086927.1 | type IV conjugative transfer system protein TraE | - |
| MW404_RS25050 (20967) | 20967..21695 | + | 729 | WP_001230771.1 | type-F conjugative transfer system secretin TraK | - |
| MW404_RS25055 (21695) | 21695..23146 | + | 1452 | WP_000146663.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| MW404_RS25060 (23136) | 23136..23702 | + | 567 | WP_000896598.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| MW404_RS25065 (23689) | 23689..24006 | + | 318 | WP_001057297.1 | conjugal transfer protein TrbD | - |
| MW404_RS25070 (24006) | 24006..24521 | + | 516 | WP_000809872.1 | type IV conjugative transfer system lipoprotein TraV | - |
| MW404_RS25075 (24656) | 24656..24877 | + | 222 | WP_001278695.1 | conjugal transfer protein TraR | - |
| MW404_RS25080 (24870) | 24870..25347 | + | 478 | Protein_40 | hypothetical protein | - |
| MW404_RS25085 (25427) | 25427..25645 | + | 219 | WP_000556745.1 | hypothetical protein | - |
| MW404_RS25090 (25673) | 25673..26020 | + | 348 | WP_000836682.1 | hypothetical protein | - |
| MW404_RS25095 (26146) | 26146..28776 | + | 2631 | WP_032152342.1 | type IV secretion system protein TraC | - |
| MW404_RS25100 (28773) | 28773..29159 | + | 387 | WP_000214084.1 | type-F conjugative transfer system protein TrbI | - |
| MW404_RS25105 (29156) | 29156..29788 | + | 633 | WP_001203720.1 | type-F conjugative transfer system protein TraW | - |
| MW404_RS25110 (29785) | 29785..30777 | + | 993 | WP_000830849.1 | conjugal transfer pilus assembly protein TraU | - |
| MW404_RS25115 (30807) | 30807..31112 | + | 306 | WP_000224418.1 | hypothetical protein | - |
| MW404_RS25120 (31121) | 31121..31759 | + | 639 | WP_001080251.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| MW404_RS25125 (31756) | 31756..33606 | + | 1851 | WP_000821860.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| MW404_RS25130 (33633) | 33633..33890 | + | 258 | WP_000864329.1 | conjugal transfer protein TrbE | - |
| MW404_RS25135 (33883) | 33883..34626 | + | 744 | WP_001030371.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| MW404_RS25140 (34640) | 34640..34984 | + | 345 | WP_000556796.1 | conjugal transfer protein TrbA | - |
| MW404_RS25145 (35103) | 35103..35387 | + | 285 | WP_000624194.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| MW404_RS25150 (35374) | 35374..35919 | + | 546 | WP_000059831.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| MW404_RS25155 (35849) | 35849..36196 | + | 348 | WP_001309242.1 | P-type conjugative transfer protein TrbJ | - |
| MW404_RS25160 (36177) | 36177..36569 | + | 393 | WP_000660700.1 | F-type conjugal transfer protein TrbF | - |
| MW404_RS25165 (36556) | 36556..37929 | + | 1374 | WP_001535740.1 | conjugal transfer pilus assembly protein TraH | - |
| MW404_RS25170 (37926) | 37926..40751 | + | 2826 | WP_039719946.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| MW404_RS25175 (40748) | 40748..41257 | + | 510 | WP_000628099.1 | conjugal transfer entry exclusion protein TraS | - |
| MW404_RS25180 (41271) | 41271..42002 | + | 732 | WP_000850422.1 | conjugal transfer complement resistance protein TraT | - |
| MW404_RS25185 (42205) | 42205..42744 | + | 540 | Protein_61 | hypothetical protein | - |
| MW404_RS25190 (42830) | 42830..43255 | + | 426 | WP_000422741.1 | IS66 family transposase ISEc23 | Transposase |
| MW404_RS25195 (43252) | 43252..43602 | + | 351 | WP_000624722.1 | IS66 family transposase ISEc23 | Transposase |
| MW404_RS25200 (43633) | 43633..45246 | + | 1614 | WP_000080195.1 | IS66 family transposase ISEc23 | Transposase |
| MW404_RS25205 (45279) | 45279..45482 | + | 204 | Protein_65 | hypothetical protein | - |
| MW404_RS25210 (45533) | 45533..47821 | + | 2289 | WP_182483045.1 | Coupling protein TraD | VF |
| MW404_RS25215 (47821) | 47821..53091 | + | 5271 | WP_268086930.1 | Multifunctional conjugation protein TraI | Relaxase |
| MW404_RS25220 (53111) | 53111..53857 | + | 747 | WP_019842127.1 | conjugal transfer pilus acetylase TraX | - |
| MW404_RS25225 (53912) | 53912..54469 | + | 558 | WP_000139329.1 | fertility inhibition protein FinO | - |
| MW404_RS25230 (54621) | 54621..54824 | + | 204 | WP_001336517.1 | hypothetical protein | - |
| MW404_RS25235 (55566) | 55566..56027 | + | 462 | WP_019842128.1 | thermonuclease family protein | - |
| MW404_RS25240 (56296) | 56296..56514 | + | 219 | WP_023150739.1 | hypothetical protein | - |
| MW404_RS25245 (56667) | 56667..57104 | + | 438 | WP_000872609.1 | hypothetical protein | - |
| - (57199) | 57199..57255 | - | 57 | NuclAT_1 | - | Antitoxin Detail |
| - (57199) | 57199..57255 | - | 57 | NuclAT_1 | - | Antitoxin Detail |
| - (57199) | 57199..57255 | - | 57 | NuclAT_1 | - | Antitoxin Detail |
| - (57199) | 57199..57255 | - | 57 | NuclAT_1 | - | Antitoxin Detail |
| MW404_RS25250 (57303) | 57303..57452 | + | 150 | WP_001336447.1 | Hok/Gef family protein | Toxin Detail |
| MW404_RS25255 (57737) | 57737..57994 | + | 258 | WP_000084404.1 | replication regulatory protein RepA | - |
| MW404_RS25260 (58230) | 58230..58304 | + | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| MW404_RS25265 (58297) | 58297..59154 | + | 858 | WP_000130646.1 | incFII family plasmid replication initiator RepA | - |
| MW404_RS25270 (60067) | 60067..60204 | + | 138 | Protein_78 | XRE family transcriptional regulator | - |
| MW404_RS25275 (60224) | 60224..60487 | + | 264 | WP_001089473.1 | hypothetical protein | - |
| MW404_RS25280 (60477) | 60477..60776 | + | 300 | WP_001528606.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| MW404_RS25285 (60812) | 60812..61477 | - | 666 | WP_001535733.1 | hypothetical protein | - |
| MW404_RS25290 (61665) | 61665..62525 | - | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| MW404_RS25295 (62708) | 62708..63265 | - | 558 | WP_001235713.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| MW404_RS25300 (63429) | 63429..66434 | + | 3006 | WP_001143760.1 | Tn3 family transposase TnpA_Tn3 | Transposase |
| MW404_RS25305 (67002) | 67002..67565 | - | 564 | WP_000351266.1 | pentapeptide repeat-containing protein | - |
| MW404_RS25310 (67569) | 67569..68300 | - | 732 | WP_000155032.1 | ATP-binding cassette domain-containing protein | - |
| MW404_RS25315 (68297) | 68297..69022 | - | 726 | WP_268086931.1 | microcin B17 immunity protein McbE | - |
| MW404_RS25320 (69032) | 69032..70171 | - | 1140 | WP_224223109.1 | YcaO-like family protein | - |
| MW404_RS25325 (70203) | 70203..71021 | - | 819 | WP_001528601.1 | SagB/ThcOx family dehydrogenase | - |
| MW404_RS25330 (71023) | 71023..71877 | - | 855 | WP_016235969.1 | McbB family protein | - |
| MW404_RS25335 (71937) | 71937..72146 | - | 210 | WP_001535752.1 | microcin B17 family TOMM | - |
| MW404_RS25340 (72676) | 72676..73128 | + | 453 | WP_000670962.1 | acyltransferase | - |
| MW404_RS25345 (73531) | 73531..73881 | - | 351 | WP_001365718.1 | plasmid partitioning/stability family protein | - |
| MW404_RS25350 (73884) | 73884..74318 | - | 435 | Protein_94 | plasmid segregation protein ParM | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|