MGE detailed information
MGE type: Conjugative plasmid MGE length: 70455 bp
Accession: NZ_CP094334 Location: 1..70455 Organism: Salmonella enterica subsp. enterica strain 3018683606 Replicon: plasmid pST3606-2
Accession: NZ_CP094334 Location: 1..70455 Organism: Salmonella enterica subsp. enterica strain 3018683606 Replicon: plasmid pST3606-2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MQF88_RS25060 (622) | 622..1098 | - | 477 | WP_013023839.1 | WbuC family cupin fold metalloprotein | - |
| MQF88_RS25065 (1357) | 1357..2217 | - | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| MQF88_RS25070 (2480) | 2480..3184 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| MQF88_RS25075 (3241) | 3241..3384 | - | 144 | Protein_4 | IS4 family transposase | - |
| MQF88_RS25080 (3527) | 3527..4387 | + | 861 | WP_000557454.1 | SPBc2 prophage-derived aminoglycoside N(3')-acetyltransferase-like protein YokD | ARG |
| MQF88_RS25085 (4400) | 4400..4942 | + | 543 | WP_000587837.1 | AAA family ATPase | - |
| MQF88_RS25090 (5424) | 5424..5615 | - | 192 | WP_000951934.1 | hypothetical protein | - |
| MQF88_RS25095 (5639) | 5639..5866 | + | 228 | WP_000248278.1 | hypothetical protein | - |
| MQF88_RS25100 (5917) | 5917..7043 | + | 1127 | Protein_9 | DUF3883 domain-containing protein | - |
| MQF88_RS25105 (7080) | 7080..7784 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| MQF88_RS25110 (7850) | 7850..8395 | + | 546 | Protein_11 | Tn3 family transposase TnpA_Tn3 | Transposase |
| MQF88_RS25115 (8431) | 8431..8846 | - | 416 | Protein_12 | IS1 family transposase IS1R | Transposase |
| MQF88_RS25120 (9095) | 9095..9496 | - | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| MQF88_RS25125 (9429) | 9429..9686 | - | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| MQF88_RS25130 (9779) | 9779..10432 | - | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
| MQF88_RS25135 (11371) | 11371..12228 | - | 858 | WP_032495102.1 | incFII family plasmid replication initiator RepA | - |
| MQF88_RS25610 (12221) | 12221..12295 | - | 75 | WP_001375168.1 | RepA leader peptide Tap | - |
| MQF88_RS25150 (12540) | 12540..12788 | - | 249 | WP_000083837.1 | replication regulatory protein RepA | - |
| MQF88_RS25155 (13072) | 13072..13221 | - | 150 | WP_001312851.1 | Hok/Gef family protein | Toxin Detail |
| - (13266) | 13266..13325 | + | 60 | NuclAT_1 | - | Antitoxin Detail |
| - (13266) | 13266..13325 | + | 60 | NuclAT_1 | - | Antitoxin Detail |
| - (13266) | 13266..13325 | + | 60 | NuclAT_1 | - | Antitoxin Detail |
| - (13266) | 13266..13325 | + | 60 | NuclAT_1 | - | Antitoxin Detail |
| MQF88_RS25160 (13526) | 13526..13756 | - | 231 | WP_001736714.1 | hypothetical protein | - |
| MQF88_RS25165 (13920) | 13920..14519 | - | 600 | WP_032083981.1 | PIN domain-containing protein | - |
| MQF88_RS25170 (14905) | 14905..15105 | - | 201 | WP_015059022.1 | hypothetical protein | - |
| MQF88_RS25175 (15237) | 15237..15797 | - | 561 | WP_000139328.1 | fertility inhibition protein FinO | - |
| MQF88_RS25180 (15852) | 15852..16598 | - | 747 | WP_000205770.1 | conjugal transfer pilus acetylase TraX | - |
| MQF88_RS25185 (16618) | 16618..21888 | - | 5271 | WP_061093447.1 | Multifunctional conjugation protein TraI | Relaxase |
| MQF88_RS25190 (21888) | 21888..24113 | - | 2226 | WP_000009363.1 | type IV conjugative transfer system coupling protein TraD | - |
| MQF88_RS25195 (24164) | 24164..24901 | - | 738 | WP_015059020.1 | hypothetical protein | - |
| MQF88_RS25200 (25104) | 25104..25835 | - | 732 | WP_021559024.1 | conjugal transfer complement resistance protein TraT | - |
| MQF88_RS25205 (25860) | 25860..26381 | - | 522 | WP_000632668.1 | conjugal transfer entry exclusion protein TraS | - |
| MQF88_RS25210 (26414) | 26414..29228 | - | 2815 | Protein_30 | conjugal transfer mating-pair stabilization protein TraG | - |
| MQF88_RS25215 (29225) | 29225..30598 | - | 1374 | WP_000944325.1 | conjugal transfer pilus assembly protein TraH | - |
| MQF88_RS25220 (30585) | 30585..30977 | - | 393 | WP_000126338.1 | F-type conjugal transfer protein TrbF | - |
| MQF88_RS25225 (30931) | 30931..31245 | - | 315 | WP_001384255.1 | P-type conjugative transfer protein TrbJ | - |
| MQF88_RS25230 (31235) | 31235..31780 | - | 546 | WP_000059817.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| MQF88_RS25235 (31767) | 31767..32048 | - | 282 | WP_000549793.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| MQF88_RS25240 (32164) | 32164..32907 | - | 744 | WP_015059017.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| MQF88_RS25245 (32900) | 32900..33157 | - | 258 | WP_053913405.1 | conjugal transfer protein TrbE | - |
| MQF88_RS25250 (33184) | 33184..35034 | - | 1851 | WP_015059015.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| MQF88_RS25255 (35031) | 35031..35453 | - | 423 | WP_001229309.1 | HNH endonuclease signature motif containing protein | - |
| MQF88_RS25260 (35479) | 35479..35850 | - | 372 | WP_000056336.1 | hypothetical protein | - |
| MQF88_RS25265 (35847) | 35847..36485 | - | 639 | WP_000087532.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| MQF88_RS25270 (36512) | 36512..37033 | - | 522 | WP_015059014.1 | hypothetical protein | - |
| MQF88_RS25275 (37096) | 37096..37404 | - | 309 | WP_000412447.1 | hypothetical protein | - |
| MQF88_RS25280 (37431) | 37431..38423 | - | 993 | WP_000830838.1 | conjugal transfer pilus assembly protein TraU | - |
| MQF88_RS25285 (38420) | 38420..39052 | - | 633 | WP_001203735.1 | type-F conjugative transfer system protein TraW | - |
| MQF88_RS25290 (39049) | 39049..39435 | - | 387 | WP_015059013.1 | type-F conjugative transfer system protein TrbI | - |
| MQF88_RS25295 (39432) | 39432..42059 | - | 2628 | WP_015059012.1 | type IV secretion system protein TraC | - |
| MQF88_RS25300 (42219) | 42219..42440 | - | 222 | WP_001278692.1 | conjugal transfer protein TraR | - |
| MQF88_RS25305 (42575) | 42575..43090 | - | 516 | WP_000809902.1 | type IV conjugative transfer system lipoprotein TraV | - |
| MQF88_RS25310 (43087) | 43087..43338 | - | 252 | WP_001038341.1 | conjugal transfer protein TrbG | - |
| MQF88_RS25315 (43350) | 43350..43547 | - | 198 | WP_001324648.1 | conjugal transfer protein TrbD | - |
| MQF88_RS25320 (43534) | 43534..44124 | - | 591 | WP_000002778.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| MQF88_RS25325 (44114) | 44114..45541 | - | 1428 | WP_032297072.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| MQF88_RS25330 (45541) | 45541..46269 | - | 729 | WP_001230787.1 | type-F conjugative transfer system secretin TraK | - |
| MQF88_RS25335 (46256) | 46256..46822 | - | 567 | WP_000399794.1 | type IV conjugative transfer system protein TraE | - |
| MQF88_RS25340 (46844) | 46844..47155 | - | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| MQF88_RS25345 (47170) | 47170..47535 | - | 366 | WP_021519752.1 | type IV conjugative transfer system pilin TraA | - |
| MQF88_RS25350 (47579) | 47579..47749 | - | 171 | WP_242935023.1 | TraY domain-containing protein | - |
| MQF88_RS25355 (47886) | 47886..48569 | - | 684 | Protein_59 | PAS domain-containing protein | - |
| MQF88_RS25360 (48760) | 48760..49143 | - | 384 | WP_000124981.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| MQF88_RS25365 (49420) | 49420..50067 | + | 648 | WP_015059008.1 | hypothetical protein | VF |
| MQF88_RS25370 (50364) | 50364..51185 | - | 822 | WP_001234445.1 | DUF932 domain-containing protein | - |
| MQF88_RS25375 (51296) | 51296..51592 | - | 297 | WP_001272251.1 | hypothetical protein | - |
| MQF88_RS25380 (51892) | 51892..52188 | + | 297 | Protein_64 | hypothetical protein | - |
| MQF88_RS25385 (52507) | 52507..52632 | - | 126 | WP_001372321.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| MQF88_RS25390 (52574) | 52574..52723 | - | 150 | Protein_66 | plasmid maintenance protein Mok | - |
| - (52709) | 52709..52933 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - (52709) | 52709..52933 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - (52709) | 52709..52933 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - (52709) | 52709..52933 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| MQF88_RS25395 (52945) | 52945..53664 | - | 720 | WP_001276217.1 | plasmid SOS inhibition protein A | - |
| MQF88_RS25400 (53661) | 53661..54095 | - | 435 | WP_000845953.1 | conjugation system SOS inhibitor PsiB | - |
| MQF88_RS25405 (54164) | 54164..56187 | - | 2024 | Protein_69 | ParB/RepB/Spo0J family partition protein | - |
| MQF88_RS25410 (56248) | 56248..56481 | - | 234 | WP_000006003.1 | DUF905 family protein | - |
| MQF88_RS25415 (56539) | 56539..57066 | - | 528 | WP_000290834.1 | single-stranded DNA-binding protein | - |
| MQF88_RS25420 (57368) | 57368..57823 | + | 456 | Protein_72 | hypothetical protein | - |
| MQF88_RS25425 (57909) | 57909..58472 | - | 564 | WP_015059007.1 | class I SAM-dependent methyltransferase | - |
| MQF88_RS25430 (58519) | 58519..59880 | - | 1362 | WP_000170695.1 | DUF3560 domain-containing protein | - |
| MQF88_RS25435 (59932) | 59932..60162 | - | 231 | WP_000218642.1 | hypothetical protein | - |
| MQF88_RS25440 (61200) | 61200..61391 | - | 192 | WP_001027493.1 | hypothetical protein | - |
| MQF88_RS25445 (61388) | 61388..61810 | - | 423 | WP_000271762.1 | DUF1380 family protein | - |
| MQF88_RS25450 (61857) | 61857..62282 | - | 426 | WP_001198928.1 | antirestriction protein | - |
| MQF88_RS25455 (62695) | 62695..63439 | - | 745 | Protein_79 | hypothetical protein | - |
| MQF88_RS25460 (63503) | 63503..63932 | - | 430 | Protein_80 | DUF1380 family protein | - |
| MQF88_RS25465 (63946) | 63946..64167 | - | 222 | WP_001104881.1 | hypothetical protein | - |
| MQF88_RS25470 (64168) | 64168..64851 | - | 684 | WP_000085883.1 | DNA methylase | - |
| MQF88_RS25475 (64928) | 64928..65221 | - | 294 | WP_032146011.1 | hypothetical protein | - |
| MQF88_RS25480 (65368) | 65368..66330 | + | 963 | WP_000959884.1 | plasmid segregation protein ParM | - |
| MQF88_RS25485 (66333) | 66333..66683 | + | 351 | WP_000361389.1 | plasmid partitioning/stability family protein | - |
| MQF88_RS25490 (66806) | 66806..67087 | - | 282 | WP_001333089.1 | hypothetical protein | - |
| MQF88_RS25495 (67215) | 67215..67449 | - | 235 | Protein_87 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| MQF88_RS25500 (68898) | 68898..68963 | - | 66 | Protein_88 | IS1 family transposase | - |
| MQF88_RS25505 (69029) | 69029..69733 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|