MGE detailed information
MGE type: Conjugative plasmid MGE length: 79537 bp
Accession: NZ_CP093550 Location: 1..79537 Organism: Escherichia coli strain YL03 Replicon: plasmid unnamed2
Accession: NZ_CP093550 Location: 1..79537 Organism: Escherichia coli strain YL03 Replicon: plasmid unnamed2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MPJ80_RS25030 (1) | 1..858 | + | 858 | WP_016240488.1 | incFII family plasmid replication initiator RepA | - |
| MPJ80_RS25035 (1559) | 1559..1717 | + | 159 | WP_032142560.1 | hypothetical protein | - |
| MPJ80_RS25040 (1772) | 1772..2041 | + | 270 | WP_012881119.1 | type II toxin-antitoxin system antitoxin YacA | Antitoxin Detail |
| MPJ80_RS25045 (2041) | 2041..2319 | + | 279 | WP_244449344.1 | type II toxin-antitoxin system toxin YacB | Toxin Detail |
| MPJ80_RS25050 (2365) | 2365..3213 | + | 849 | WP_012881117.1 | 3'-5' exonuclease | - |
| MPJ80_RS25055 (3330) | 3330..3812 | + | 483 | WP_001311056.1 | hypothetical protein | - |
| MPJ80_RS25060 (3847) | 3847..4869 | - | 1023 | Protein_6 | maltoporin LamB | - |
| MPJ80_RS25065 (4918) | 4918..5325 | - | 408 | Protein_7 | IS5-like element IS903B family transposase | - |
| MPJ80_RS25070 (5405) | 5405..6280 | - | 876 | WP_001617865.1 | extended-spectrum class A beta-lactamase CTX-M-14 | - |
| MPJ80_RS25075 (6530) | 6530..7792 | - | 1263 | WP_000608644.1 | IS1380-like element ISEcp1 family transposase | - |
| MPJ80_RS25080 (8136) | 8136..9323 | - | 1188 | WP_025999368.1 | MFS transporter | - |
| MPJ80_RS25085 (9380) | 9380..10141 | - | 762 | WP_000020504.1 | ABC transporter ATP-binding protein | - |
| MPJ80_RS25090 (10141) | 10141..11178 | - | 1038 | WP_001545318.1 | iron ABC transporter permease | - |
| MPJ80_RS25095 (11178) | 11178..12176 | - | 999 | WP_012881113.1 | ABC transporter substrate-binding protein | - |
| MPJ80_RS25100 (12326) | 12326..12484 | - | 159 | Protein_14 | integrase core domain-containing protein | - |
| MPJ80_RS25105 (12527) | 12527..12769 | - | 243 | Protein_15 | recombinase family protein | - |
| MPJ80_RS25110 (13027) | 13027..13377 | - | 351 | WP_001414994.1 | plasmid partitioning/stability family protein | - |
| MPJ80_RS25115 (13380) | 13380..14342 | - | 963 | WP_000959878.1 | plasmid segregation protein ParM | - |
| MPJ80_RS25120 (14489) | 14489..14782 | + | 294 | WP_032142565.1 | hypothetical protein | - |
| MPJ80_RS25125 (14858) | 14858..15541 | + | 684 | WP_012881149.1 | DNA methylase | - |
| MPJ80_RS25130 (15542) | 15542..15763 | + | 222 | WP_012881148.1 | hypothetical protein | - |
| MPJ80_RS25135 (15777) | 15777..16211 | + | 435 | WP_012917669.1 | DUF1380 family protein | - |
| MPJ80_RS25140 (16262) | 16262..17038 | + | 777 | WP_025999342.1 | hypothetical protein | - |
| MPJ80_RS25145 (17454) | 17454..17879 | + | 426 | WP_001198895.1 | antirestriction protein | - |
| MPJ80_RS25150 (17926) | 17926..18348 | + | 423 | WP_012917670.1 | DUF1380 family protein | - |
| MPJ80_RS25155 (18345) | 18345..18536 | + | 192 | WP_001027516.1 | hypothetical protein | - |
| MPJ80_RS25160 (18853) | 18853..20520 | - | 1668 | WP_117313998.1 | group II intron reverse transcriptase/maturase | - |
| MPJ80_RS25165 (21249) | 21249..21403 | - | 155 | Protein_27 | hypothetical protein | - |
| MPJ80_RS25170 (21916) | 21916..22146 | + | 231 | WP_000155844.1 | hypothetical protein | - |
| MPJ80_RS25175 (22198) | 22198..23559 | + | 1362 | WP_012917672.1 | DUF3560 domain-containing protein | - |
| MPJ80_RS25180 (23606) | 23606..24169 | + | 564 | WP_012881140.1 | class I SAM-dependent methyltransferase | - |
| MPJ80_RS25185 (24255) | 24255..24419 | - | 165 | Protein_31 | hypothetical protein | - |
| MPJ80_RS25190 (24532) | 24532..26199 | - | 1668 | WP_117313998.1 | group II intron reverse transcriptase/maturase | - |
| MPJ80_RS25195 (26928) | 26928..27101 | - | 174 | Protein_33 | hypothetical protein | - |
| MPJ80_RS25200 (27403) | 27403..27924 | + | 522 | WP_012881138.1 | single-stranded DNA-binding protein | - |
| MPJ80_RS25205 (27980) | 27980..28213 | + | 234 | WP_000005971.1 | DUF905 domain-containing protein | - |
| MPJ80_RS25210 (28277) | 28277..30235 | + | 1959 | WP_012881137.1 | ParB/RepB/Spo0J family partition protein | - |
| MPJ80_RS25215 (30290) | 30290..30724 | + | 435 | WP_000845949.1 | conjugation system SOS inhibitor PsiB | - |
| MPJ80_RS25220 (30721) | 30721..31440 | + | 720 | WP_012881136.1 | plasmid SOS inhibition protein A | - |
| MPJ80_RS25225 (31437) | 31437..31751 | + | 315 | WP_000872086.1 | hypothetical protein | - |
| - (31700) | 31700..31907 | + | 208 | NuclAT_0 | - | - |
| - (31700) | 31700..31907 | + | 208 | NuclAT_0 | - | - |
| - (31700) | 31700..31907 | + | 208 | NuclAT_0 | - | - |
| - (31700) | 31700..31907 | + | 208 | NuclAT_0 | - | - |
| MPJ80_RS25230 (31941) | 31941..32054 | + | 114 | Protein_40 | DUF5431 family protein | - |
| MPJ80_RS25235 (31999) | 31999..32121 | + | 123 | WP_223412041.1 | Hok/Gef family protein | Toxin Detail |
| MPJ80_RS25240 (32422) | 32422..32671 | - | 250 | Protein_42 | hypothetical protein | - |
| MPJ80_RS25245 (32967) | 32967..33290 | + | 324 | WP_000533253.1 | hypothetical protein | - |
| MPJ80_RS25250 (33349) | 33349..33591 | + | 243 | WP_000540588.1 | hypothetical protein | - |
| MPJ80_RS25255 (33791) | 33791..33943 | - | 153 | Protein_45 | hypothetical protein | - |
| MPJ80_RS25260 (34056) | 34056..35723 | - | 1668 | WP_117313998.1 | group II intron reverse transcriptase/maturase | - |
| MPJ80_RS25265 (36452) | 36452..36625 | - | 174 | Protein_47 | hypothetical protein | - |
| MPJ80_RS25270 (36925) | 36925..37221 | + | 297 | WP_001272251.1 | hypothetical protein | - |
| MPJ80_RS25275 (37331) | 37331..38152 | + | 822 | WP_001234437.1 | DUF932 domain-containing protein | - |
| MPJ80_RS25280 (38448) | 38448..39038 | - | 591 | WP_000252686.1 | transglycosylase SLT domain-containing protein | - |
| MPJ80_RS25285 (39371) | 39371..39754 | + | 384 | WP_001151529.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| MPJ80_RS25290 (39946) | 39946..40593 | + | 648 | WP_000332523.1 | transcriptional regulator TraJ family protein | - |
| MPJ80_RS25295 (40713) | 40713..40940 | + | 228 | WP_000589556.1 | conjugal transfer relaxosome protein TraY | - |
| MPJ80_RS25300 (40974) | 40974..41336 | + | 363 | WP_012881131.1 | type IV conjugative transfer system pilin TraA | - |
| MPJ80_RS25305 (41351) | 41351..41662 | + | 312 | WP_000012100.1 | type IV conjugative transfer system protein TraL | - |
| MPJ80_RS25310 (41684) | 41684..42250 | + | 567 | WP_000399780.1 | type IV conjugative transfer system protein TraE | - |
| MPJ80_RS25315 (42237) | 42237..42965 | + | 729 | WP_001230769.1 | type-F conjugative transfer system secretin TraK | - |
| MPJ80_RS25320 (42965) | 42965..44392 | + | 1428 | WP_012881130.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| MPJ80_RS25325 (44382) | 44382..44972 | + | 591 | WP_012881129.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| MPJ80_RS25330 (44959) | 44959..45279 | + | 321 | WP_012881128.1 | conjugal transfer protein TrbD | - |
| MPJ80_RS25335 (45276) | 45276..45791 | + | 516 | WP_000809881.1 | type IV conjugative transfer system lipoprotein TraV | - |
| MPJ80_RS25340 (45926) | 45926..46147 | + | 222 | WP_001278683.1 | conjugal transfer protein TraR | - |
| MPJ80_RS25345 (46140) | 46140..46616 | + | 477 | WP_012881127.1 | hypothetical protein | - |
| MPJ80_RS25350 (46715) | 46715..46933 | + | 219 | WP_000556745.1 | hypothetical protein | - |
| MPJ80_RS25355 (46961) | 46961..47308 | + | 348 | WP_000836682.1 | hypothetical protein | - |
| MPJ80_RS25360 (47434) | 47434..50064 | + | 2631 | WP_000069772.1 | type IV secretion system protein TraC | - |
| MPJ80_RS25365 (50061) | 50061..50447 | + | 387 | WP_000214084.1 | type-F conjugative transfer system protein TrbI | - |
| MPJ80_RS25370 (50444) | 50444..51076 | + | 633 | WP_001203720.1 | type-F conjugative transfer system protein TraW | - |
| MPJ80_RS25375 (51073) | 51073..52065 | + | 993 | WP_000830849.1 | conjugal transfer pilus assembly protein TraU | - |
| MPJ80_RS25380 (52095) | 52095..52400 | + | 306 | WP_000224418.1 | hypothetical protein | - |
| MPJ80_RS25385 (52409) | 52409..53047 | + | 639 | WP_015058995.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| MPJ80_RS25390 (53044) | 53044..54894 | + | 1851 | WP_012881125.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| MPJ80_RS25395 (54921) | 54921..55178 | + | 258 | WP_000864353.1 | conjugal transfer protein TrbE | - |
| MPJ80_RS25400 (55171) | 55171..55914 | + | 744 | WP_001030371.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| MPJ80_RS25405 (55928) | 55928..56269 | + | 342 | WP_000556795.1 | conjugal transfer protein TrbA | - |
| MPJ80_RS25410 (56250) | 56250..56585 | - | 336 | WP_000736414.1 | hypothetical protein | - |
| MPJ80_RS25415 (56666) | 56666..56950 | + | 285 | WP_000624107.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| MPJ80_RS25420 (56937) | 56937..57482 | + | 546 | WP_000059830.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| MPJ80_RS25425 (57412) | 57412..57759 | + | 348 | WP_011666494.1 | P-type conjugative transfer protein TrbJ | - |
| MPJ80_RS25430 (57740) | 57740..58132 | + | 393 | WP_000659962.1 | F-type conjugal transfer protein TrbF | - |
| MPJ80_RS25435 (58119) | 58119..59492 | + | 1374 | WP_000944331.1 | conjugal transfer pilus assembly protein TraH | - |
| MPJ80_RS25440 (59489) | 59489..62314 | + | 2826 | WP_012881124.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| MPJ80_RS25445 (62311) | 62311..62820 | + | 510 | WP_000628111.1 | conjugal transfer entry exclusion protein TraS | - |
| MPJ80_RS25450 (62834) | 62834..63565 | + | 732 | WP_012881123.1 | conjugal transfer complement resistance protein TraT | - |
| MPJ80_RS25455 (63768) | 63768..64403 | + | 636 | Protein_85 | hypothetical protein | - |
| MPJ80_RS25465 (65869) | 65869..68121 | + | 2253 | WP_257120053.1 | type IV conjugative transfer system coupling protein TraD | - |
| MPJ80_RS25470 (68121) | 68121..73391 | + | 5271 | WP_000948349.1 | conjugative transfer relaxase/helicase TraI | - |
| MPJ80_RS25475 (73411) | 73411..74157 | + | 747 | WP_059338983.1 | conjugal transfer pilus acetylase TraX | - |
| MPJ80_RS25480 (74216) | 74216..75076 | + | 861 | WP_000704523.1 | alpha/beta hydrolase | - |
| MPJ80_RS25485 (75179) | 75179..75739 | + | 561 | WP_000139321.1 | fertility inhibition protein FinO | - |
| MPJ80_RS25490 (75868) | 75868..76080 | + | 213 | WP_001309245.1 | ANR family transcriptional regulator | - |
| MPJ80_RS25495 (76325) | 76325..76786 | + | 462 | WP_001233838.1 | thermonuclease family protein | - |
| MPJ80_RS25500 (76832) | 76832..77041 | + | 210 | WP_001298565.1 | hemolysin expression modulator Hha | - |
| MPJ80_RS25505 (77079) | 77079..77669 | + | 591 | WP_033807967.1 | DUF2726 domain-containing protein | - |
| MPJ80_RS25510 (77824) | 77824..78297 | + | 474 | WP_016240489.1 | hypothetical protein | - |
| - (78440) | 78440..78499 | - | 60 | NuclAT_1 | - | - |
| - (78440) | 78440..78499 | - | 60 | NuclAT_1 | - | - |
| - (78440) | 78440..78499 | - | 60 | NuclAT_1 | - | - |
| - (78440) | 78440..78499 | - | 60 | NuclAT_1 | - | - |
| MPJ80_RS25515 (78544) | 78544..78693 | + | 150 | WP_001312851.1 | Hok/Gef family protein | - |
| MPJ80_RS25520 (78978) | 78978..79226 | + | 249 | WP_000083839.1 | replication regulatory protein RepA | - |
| MPJ80_RS25525 (79341) | 79341..79525 | + | 185 | Protein_99 | protein CopA/IncA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|