MGE detailed information
MGE type: Conjugative plasmid MGE length: 79537 bp
Accession: NZ_CP093550 Location: 1..79537 Organism: Escherichia coli strain YL03 Replicon: plasmid unnamed2
Accession: NZ_CP093550 Location: 1..79537 Organism: Escherichia coli strain YL03 Replicon: plasmid unnamed2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MPJ80_RS25030 () | 1..858 | + | 858 | WP_016240488.1 | incFII family plasmid replication initiator RepA | - |
| MPJ80_RS25035 () | 1559..1717 | + | 159 | WP_032142560.1 | hypothetical protein | - |
| MPJ80_RS25040 () | 1772..2041 | + | 270 | WP_012881119.1 | type II toxin-antitoxin system antitoxin YacA | Antitoxin Detail |
| MPJ80_RS25045 () | 2041..2319 | + | 279 | WP_244449344.1 | type II toxin-antitoxin system toxin YacB | Toxin Detail |
| MPJ80_RS25050 () | 2365..3213 | + | 849 | WP_012881117.1 | 3'-5' exonuclease | - |
| MPJ80_RS25055 () | 3330..3812 | + | 483 | WP_001311056.1 | hypothetical protein | - |
| MPJ80_RS25060 () | 3847..4869 | - | 1023 | Protein_6 | maltoporin LamB | - |
| MPJ80_RS25065 () | 4918..5325 | - | 408 | Protein_7 | IS5-like element IS903B family transposase | - |
| MPJ80_RS25070 () | 5405..6280 | - | 876 | WP_001617865.1 | extended-spectrum class A beta-lactamase CTX-M-14 | - |
| MPJ80_RS25075 () | 6530..7792 | - | 1263 | WP_000608644.1 | IS1380-like element ISEcp1 family transposase | - |
| MPJ80_RS25080 () | 8136..9323 | - | 1188 | WP_025999368.1 | MFS transporter | - |
| MPJ80_RS25085 () | 9380..10141 | - | 762 | WP_000020504.1 | ABC transporter ATP-binding protein | - |
| MPJ80_RS25090 () | 10141..11178 | - | 1038 | WP_001545318.1 | iron ABC transporter permease | - |
| MPJ80_RS25095 () | 11178..12176 | - | 999 | WP_012881113.1 | ABC transporter substrate-binding protein | - |
| MPJ80_RS25100 () | 12326..12484 | - | 159 | Protein_14 | integrase core domain-containing protein | - |
| MPJ80_RS25105 () | 12527..12769 | - | 243 | Protein_15 | recombinase family protein | - |
| MPJ80_RS25110 () | 13027..13377 | - | 351 | WP_001414994.1 | plasmid partitioning/stability family protein | - |
| MPJ80_RS25115 () | 13380..14342 | - | 963 | WP_000959878.1 | plasmid segregation protein ParM | - |
| MPJ80_RS25120 () | 14489..14782 | + | 294 | WP_032142565.1 | hypothetical protein | - |
| MPJ80_RS25125 () | 14858..15541 | + | 684 | WP_012881149.1 | DNA methylase | - |
| MPJ80_RS25130 () | 15542..15763 | + | 222 | WP_012881148.1 | hypothetical protein | - |
| MPJ80_RS25135 () | 15777..16211 | + | 435 | WP_012917669.1 | DUF1380 family protein | - |
| MPJ80_RS25140 () | 16262..17038 | + | 777 | WP_025999342.1 | hypothetical protein | - |
| MPJ80_RS25145 () | 17454..17879 | + | 426 | WP_001198895.1 | antirestriction protein | - |
| MPJ80_RS25150 () | 17926..18348 | + | 423 | WP_012917670.1 | DUF1380 family protein | - |
| MPJ80_RS25155 () | 18345..18536 | + | 192 | WP_001027516.1 | hypothetical protein | - |
| MPJ80_RS25160 () | 18853..20520 | - | 1668 | WP_117313998.1 | group II intron reverse transcriptase/maturase | - |
| MPJ80_RS25165 () | 21249..21403 | - | 155 | Protein_27 | hypothetical protein | - |
| MPJ80_RS25170 () | 21916..22146 | + | 231 | WP_000155844.1 | hypothetical protein | - |
| MPJ80_RS25175 () | 22198..23559 | + | 1362 | WP_012917672.1 | DUF3560 domain-containing protein | - |
| MPJ80_RS25180 () | 23606..24169 | + | 564 | WP_012881140.1 | class I SAM-dependent methyltransferase | - |
| MPJ80_RS25185 () | 24255..24419 | - | 165 | Protein_31 | hypothetical protein | - |
| MPJ80_RS25190 () | 24532..26199 | - | 1668 | WP_117313998.1 | group II intron reverse transcriptase/maturase | - |
| MPJ80_RS25195 () | 26928..27101 | - | 174 | Protein_33 | hypothetical protein | - |
| MPJ80_RS25200 () | 27403..27924 | + | 522 | WP_012881138.1 | single-stranded DNA-binding protein | - |
| MPJ80_RS25205 () | 27980..28213 | + | 234 | WP_000005971.1 | DUF905 domain-containing protein | - |
| MPJ80_RS25210 () | 28277..30235 | + | 1959 | WP_012881137.1 | ParB/RepB/Spo0J family partition protein | - |
| MPJ80_RS25215 () | 30290..30724 | + | 435 | WP_000845949.1 | conjugation system SOS inhibitor PsiB | - |
| MPJ80_RS25220 () | 30721..31440 | + | 720 | WP_012881136.1 | plasmid SOS inhibition protein A | - |
| MPJ80_RS25225 () | 31437..31751 | + | 315 | WP_000872086.1 | hypothetical protein | - |
| - () | 31700..31907 | + | 208 | NuclAT_0 | - | - |
| - () | 31700..31907 | + | 208 | NuclAT_0 | - | - |
| - () | 31700..31907 | + | 208 | NuclAT_0 | - | - |
| - () | 31700..31907 | + | 208 | NuclAT_0 | - | - |
| - | 31703..31907 | - | 205 | - | - | - |
| MPJ80_RS25230 () | 31941..32054 | + | 114 | Protein_40 | DUF5431 family protein | - |
| MPJ80_RS25235 () | 31999..32121 | + | 123 | WP_223412041.1 | Hok/Gef family protein | Toxin Detail |
| MPJ80_RS25240 () | 32422..32671 | - | 250 | Protein_42 | hypothetical protein | - |
| MPJ80_RS25245 () | 32967..33290 | + | 324 | WP_000533253.1 | hypothetical protein | - |
| MPJ80_RS25250 () | 33349..33591 | + | 243 | WP_000540588.1 | hypothetical protein | - |
| MPJ80_RS25255 () | 33791..33943 | - | 153 | Protein_45 | hypothetical protein | - |
| MPJ80_RS25260 () | 34056..35723 | - | 1668 | WP_117313998.1 | group II intron reverse transcriptase/maturase | - |
| MPJ80_RS25265 () | 36452..36625 | - | 174 | Protein_47 | hypothetical protein | - |
| MPJ80_RS25270 () | 36925..37221 | + | 297 | WP_001272251.1 | hypothetical protein | - |
| MPJ80_RS25275 () | 37331..38152 | + | 822 | WP_001234437.1 | DUF932 domain-containing protein | - |
| MPJ80_RS25280 () | 38448..39038 | - | 591 | WP_000252686.1 | transglycosylase SLT domain-containing protein | - |
| MPJ80_RS25285 () | 39371..39754 | + | 384 | WP_001151529.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| MPJ80_RS25290 () | 39946..40593 | + | 648 | WP_000332523.1 | transcriptional regulator TraJ family protein | - |
| MPJ80_RS25295 () | 40713..40940 | + | 228 | WP_000589556.1 | conjugal transfer relaxosome protein TraY | - |
| MPJ80_RS25300 () | 40974..41336 | + | 363 | WP_012881131.1 | type IV conjugative transfer system pilin TraA | - |
| MPJ80_RS25305 () | 41351..41662 | + | 312 | WP_000012100.1 | type IV conjugative transfer system protein TraL | - |
| MPJ80_RS25310 () | 41684..42250 | + | 567 | WP_000399780.1 | type IV conjugative transfer system protein TraE | - |
| MPJ80_RS25315 () | 42237..42965 | + | 729 | WP_001230769.1 | type-F conjugative transfer system secretin TraK | - |
| MPJ80_RS25320 () | 42965..44392 | + | 1428 | WP_012881130.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| MPJ80_RS25325 () | 44382..44972 | + | 591 | WP_012881129.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| MPJ80_RS25330 () | 44959..45279 | + | 321 | WP_012881128.1 | conjugal transfer protein TrbD | - |
| MPJ80_RS25335 () | 45276..45791 | + | 516 | WP_000809881.1 | type IV conjugative transfer system lipoprotein TraV | - |
| MPJ80_RS25340 () | 45926..46147 | + | 222 | WP_001278683.1 | conjugal transfer protein TraR | - |
| MPJ80_RS25345 () | 46140..46616 | + | 477 | WP_012881127.1 | hypothetical protein | - |
| MPJ80_RS25350 () | 46715..46933 | + | 219 | WP_000556745.1 | hypothetical protein | - |
| MPJ80_RS25355 () | 46961..47308 | + | 348 | WP_000836682.1 | hypothetical protein | - |
| MPJ80_RS25360 () | 47434..50064 | + | 2631 | WP_000069772.1 | type IV secretion system protein TraC | - |
| MPJ80_RS25365 () | 50061..50447 | + | 387 | WP_000214084.1 | type-F conjugative transfer system protein TrbI | - |
| MPJ80_RS25370 () | 50444..51076 | + | 633 | WP_001203720.1 | type-F conjugative transfer system protein TraW | - |
| MPJ80_RS25375 () | 51073..52065 | + | 993 | WP_000830849.1 | conjugal transfer pilus assembly protein TraU | - |
| MPJ80_RS25380 () | 52095..52400 | + | 306 | WP_000224418.1 | hypothetical protein | - |
| MPJ80_RS25385 () | 52409..53047 | + | 639 | WP_015058995.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| MPJ80_RS25390 () | 53044..54894 | + | 1851 | WP_012881125.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| MPJ80_RS25395 () | 54921..55178 | + | 258 | WP_000864353.1 | conjugal transfer protein TrbE | - |
| MPJ80_RS25400 () | 55171..55914 | + | 744 | WP_001030371.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| MPJ80_RS25405 () | 55928..56269 | + | 342 | WP_000556795.1 | conjugal transfer protein TrbA | - |
| MPJ80_RS25410 () | 56250..56585 | - | 336 | WP_000736414.1 | hypothetical protein | - |
| MPJ80_RS25415 () | 56666..56950 | + | 285 | WP_000624107.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| MPJ80_RS25420 () | 56937..57482 | + | 546 | WP_000059830.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| MPJ80_RS25425 () | 57412..57759 | + | 348 | WP_011666494.1 | P-type conjugative transfer protein TrbJ | - |
| MPJ80_RS25430 () | 57740..58132 | + | 393 | WP_000659962.1 | F-type conjugal transfer protein TrbF | - |
| MPJ80_RS25435 () | 58119..59492 | + | 1374 | WP_000944331.1 | conjugal transfer pilus assembly protein TraH | - |
| MPJ80_RS25440 () | 59489..62314 | + | 2826 | WP_012881124.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| MPJ80_RS25445 () | 62311..62820 | + | 510 | WP_000628111.1 | conjugal transfer entry exclusion protein TraS | - |
| MPJ80_RS25450 () | 62834..63565 | + | 732 | WP_012881123.1 | conjugal transfer complement resistance protein TraT | - |
| MPJ80_RS25455 () | 63768..64403 | + | 636 | Protein_85 | hypothetical protein | - |
| MPJ80_RS25465 () | 65869..68121 | + | 2253 | WP_257120053.1 | type IV conjugative transfer system coupling protein TraD | - |
| MPJ80_RS25470 () | 68121..73391 | + | 5271 | WP_000948349.1 | conjugative transfer relaxase/helicase TraI | - |
| MPJ80_RS25475 () | 73411..74157 | + | 747 | WP_059338983.1 | conjugal transfer pilus acetylase TraX | - |
| MPJ80_RS25480 () | 74216..75076 | + | 861 | WP_000704523.1 | alpha/beta hydrolase | - |
| MPJ80_RS25485 () | 75179..75739 | + | 561 | WP_000139321.1 | fertility inhibition protein FinO | - |
| MPJ80_RS25490 () | 75868..76080 | + | 213 | WP_001309245.1 | ANR family transcriptional regulator | - |
| MPJ80_RS25495 () | 76325..76786 | + | 462 | WP_001233838.1 | thermonuclease family protein | - |
| MPJ80_RS25500 () | 76832..77041 | + | 210 | WP_001298565.1 | hemolysin expression modulator Hha | - |
| MPJ80_RS25505 () | 77079..77669 | + | 591 | WP_033807967.1 | DUF2726 domain-containing protein | - |
| MPJ80_RS25510 () | 77824..78297 | + | 474 | WP_016240489.1 | hypothetical protein | - |
| - () | 78440..78499 | - | 60 | NuclAT_1 | - | - |
| - () | 78440..78499 | - | 60 | NuclAT_1 | - | - |
| - () | 78440..78499 | - | 60 | NuclAT_1 | - | - |
| - () | 78440..78499 | - | 60 | NuclAT_1 | - | - |
| MPJ80_RS25515 () | 78544..78693 | + | 150 | WP_001312851.1 | Hok/Gef family protein | - |
| MPJ80_RS25520 () | 78978..79226 | + | 249 | WP_000083839.1 | replication regulatory protein RepA | - |
| MPJ80_RS25525 () | 79341..79525 | + | 185 | Protein_99 | protein CopA/IncA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|