MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 101562 bp
Accession: NZ_CP093400 Location: 1541294..1642855 Organism: Salmonella enterica subsp. enterica serovar Infantis strain R21.1147 Replicon: chromosome
Accession: NZ_CP093400 Location: 1541294..1642855 Organism: Salmonella enterica subsp. enterica serovar Infantis strain R21.1147 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MOP59_RS07345 (1537067) | 1537067..1537954 | - | 888 | WP_242211996.1 | threonine/homoserine exporter RhtA | - |
| MOP59_RS07350 (1538308) | 1538308..1538823 | + | 516 | WP_000716763.1 | outer membrane protein OmpX | - |
| MOP59_RS07355 (1538886) | 1538886..1540466 | - | 1581 | WP_023993604.1 | phosphoethanolamine transferase | - |
| MOP59_RS07360 (1540731) | 1540731..1540859 | - | 129 | WP_058799727.1 | manganase accumulation protein MntS | - |
| MOP59_RS07365 (1541045) | 1541045..1541518 | + | 474 | WP_000533542.1 | manganese-binding transcriptional regulator MntR | - |
| MOP59_RS07370 (1541515) | 1541515..1542627 | + | 1113 | WP_023993606.1 | anion transporter | - |
| MOP59_RS07375 (1542671) | 1542671..1543591 | - | 921 | WP_001056404.1 | L,D-transpeptidase | - |
| MOP59_RS07380 (1543810) | 1543810..1545120 | + | 1311 | Protein_1443 | ABC-F family ATPase | - |
| MOP59_RS07385 (1545185) | 1545185..1545889 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| MOP59_RS07390 (1545999) | 1545999..1546511 | + | 513 | WP_228766823.1 | PAS domain-containing protein | - |
| MOP59_RS07395 (1546486) | 1546486..1547583 | - | 1098 | Protein_1446 | TonB-dependent receptor | - |
| MOP59_RS07400 (1547640) | 1547640..1548608 | - | 969 | WP_013362812.1 | IS5 family transposase IS903B | Transposase |
| MOP59_RS07405 (1548643) | 1548643..1549518 | - | 876 | WP_013188475.1 | Beta-lactamase Toho-1 | ARG |
| MOP59_RS07410 (1549768) | 1549768..1549959 | - | 192 | Protein_1449 | IS1380 family transposase | - |
| MOP59_RS07415 (1550023) | 1550023..1550151 | - | 129 | WP_002210551.1 | hypothetical protein | - |
| MOP59_RS07420 (1550472) | 1550472..1551176 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| MOP59_RS07425 (1551255) | 1551255..1551758 | + | 504 | WP_075322284.1 | sulfite exporter TauE/SafE family protein | - |
| MOP59_RS07430 (1551821) | 1551821..1552189 | + | 369 | WP_011117601.1 | winged helix-turn-helix domain-containing protein | - |
| MOP59_RS07435 (1552263) | 1552263..1554020 | - | 1758 | WP_011117602.1 | Arsenical pump-driving ATPase | VF |
| MOP59_RS07440 (1554041) | 1554041..1554403 | - | 363 | WP_011117603.1 | arsenic metallochaperone ArsD family protein | - |
| MOP59_RS07445 (1554479) | 1554479..1555024 | - | 546 | WP_001286342.1 | sigma-70 family RNA polymerase sigma factor | - |
| MOP59_RS07450 (1555033) | 1555033..1555683 | - | 651 | WP_001360294.1 | arsenical resistance protein ArsH | - |
| MOP59_RS07455 (1555844) | 1555844..1556167 | - | 324 | WP_001175594.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| MOP59_RS07460 (1556272) | 1556272..1557309 | + | 1038 | WP_044502555.1 | permease | - |
| MOP59_RS07465 (1557602) | 1557602..1558219 | - | 618 | WP_000521603.1 | ProQ/FINO family protein | - |
| MOP59_RS07470 (1558410) | 1558410..1559966 | - | 1557 | WP_058649952.1 | AAA family ATPase | - |
| MOP59_RS07475 (1560229) | 1560229..1560819 | - | 591 | WP_000194575.1 | hypothetical protein | - |
| MOP59_RS07480 (1560819) | 1560819..1561076 | - | 258 | WP_000343085.1 | hypothetical protein | - |
| MOP59_RS07485 (1561430) | 1561430..1563568 | + | 2139 | WP_075322282.1 | AAA family ATPase | - |
| MOP59_RS07490 (1563730) | 1563730..1564146 | - | 417 | WP_001044768.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| MOP59_RS07495 (1564143) | 1564143..1564373 | - | 231 | WP_001261287.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| MOP59_RS07500 (1564681) | 1564681..1566246 | + | 1566 | WP_000741348.1 | AAA family ATPase | - |
| MOP59_RS07505 (1566303) | 1566303..1567172 | - | 870 | WP_000253407.1 | hypothetical protein | - |
| MOP59_RS07510 (1567174) | 1567174..1568262 | - | 1089 | WP_000952231.1 | hypothetical protein | - |
| MOP59_RS07515 (1568560) | 1568560..1569492 | - | 933 | WP_000991830.1 | S-4TM family putative pore-forming effector | - |
| MOP59_RS07520 (1569496) | 1569496..1570491 | - | 996 | WP_000246635.1 | hypothetical protein | - |
| MOP59_RS07525 (1571172) | 1571172..1571486 | + | 315 | WP_001302628.1 | hypothetical protein | - |
| MOP59_RS07530 (1571548) | 1571548..1572318 | + | 771 | WP_001302622.1 | hypothetical protein | - |
| MOP59_RS07535 (1572363) | 1572363..1573148 | + | 786 | WP_077249540.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| MOP59_RS07540 (1573286) | 1573286..1573561 | - | 276 | WP_000239529.1 | hypothetical protein | - |
| MOP59_RS07545 (1573555) | 1573555..1574199 | - | 645 | WP_000633913.1 | division plane positioning ATPase MipZ | - |
| MOP59_RS07550 (1574428) | 1574428..1575399 | + | 972 | WP_001103690.1 | plasmid segregation protein ParM | - |
| MOP59_RS07555 (1575404) | 1575404..1575796 | + | 393 | WP_000340829.1 | plasmid partitioning/stability family protein | - |
| MOP59_RS07560 (1575801) | 1575801..1577072 | - | 1272 | WP_000457496.1 | Y-family DNA polymerase | - |
| MOP59_RS07565 (1577072) | 1577072..1577509 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| MOP59_RS07570 (1577506) | 1577506..1577754 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| MOP59_RS07575 (1578172) | 1578172..1579074 | + | 903 | WP_001330417.1 | DUF1281 domain-containing protein | - |
| MOP59_RS07580 (1579078) | 1579078..1579383 | + | 306 | WP_013307862.1 | hypothetical protein | - |
| MOP59_RS07585 (1579459) | 1579459..1580142 | + | 684 | WP_000086137.1 | DNA methylase | - |
| MOP59_RS07590 (1580143) | 1580143..1580364 | + | 222 | WP_001104873.1 | hypothetical protein | - |
| MOP59_RS07595 (1580294) | 1580294..1580812 | + | 519 | WP_223168556.1 | DUF1380 family protein | - |
| MOP59_RS07600 (1580857) | 1580857..1581627 | + | 771 | WP_052980418.1 | hypothetical protein | - |
| MOP59_RS07605 (1582045) | 1582045..1582470 | + | 426 | WP_001198941.1 | antirestriction protein | - |
| MOP59_RS07610 (1582517) | 1582517..1582939 | + | 423 | WP_000271741.1 | DUF1380 family protein | - |
| MOP59_RS07615 (1582936) | 1582936..1583127 | + | 192 | WP_001027516.1 | hypothetical protein | - |
| MOP59_RS07620 (1583461) | 1583461..1583529 | - | 69 | Protein_1491 | pilus protein | - |
| MOP59_RS07625 (1583898) | 1583898..1584425 | + | 528 | WP_001276125.1 | single-stranded DNA-binding protein | - |
| MOP59_RS07630 (1584483) | 1584483..1584716 | + | 234 | WP_000006024.1 | DUF905 domain-containing protein | - |
| MOP59_RS07635 (1584775) | 1584775..1586733 | + | 1959 | WP_058649951.1 | ParB/RepB/Spo0J family partition protein | - |
| MOP59_RS07640 (1586788) | 1586788..1587222 | + | 435 | WP_000845898.1 | conjugation system SOS inhibitor PsiB | - |
| MOP59_RS07645 (1587219) | 1587219..1587938 | + | 720 | WP_001276261.1 | plasmid SOS inhibition protein A | - |
| MOP59_RS07650 (1587935) | 1587935..1588531 | + | 597 | WP_000978005.1 | hypothetical protein | - |
| MOP59_RS07655 (1588994) | 1588994..1589494 | + | 501 | WP_000117627.1 | antirestriction protein ArdA | - |
| MOP59_RS07660 (1590223) | 1590223..1590657 | + | 435 | WP_000218863.1 | hypothetical protein | - |
| MOP59_RS07665 (1590750) | 1590750..1591016 | + | 267 | WP_001247862.1 | hypothetical protein | - |
| MOP59_RS07670 (1591081) | 1591081..1591995 | + | 915 | WP_000038334.1 | Recombination-promoting nuclease RpnA | VF |
| MOP59_RS07675 (1591995) | 1591995..1592240 | + | 246 | WP_001260884.1 | hypothetical protein | - |
| MOP59_RS07680 (1592271) | 1592271..1592522 | - | 252 | WP_000148280.1 | helix-turn-helix transcriptional regulator | - |
| MOP59_RS07685 (1593102) | 1593102..1593950 | + | 849 | WP_058649950.1 | DUF4942 domain-containing protein | - |
| MOP59_RS07690 (1594036) | 1594036..1594371 | - | 336 | WP_000157095.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| MOP59_RS07695 (1594605) | 1594605..1594937 | + | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| MOP59_RS07700 (1594948) | 1594948..1597647 | + | 2700 | WP_006855641.1 | IncI1-type relaxase NikB | - |
| MOP59_RS07705 (1597684) | 1597684..1599975 | - | 2292 | WP_001289275.1 | F-type conjugative transfer protein TrbC | - |
| MOP59_RS07710 (1599968) | 1599968..1601038 | - | 1071 | WP_000151583.1 | IncI1-type conjugal transfer protein TrbB | - |
| MOP59_RS07715 (1601057) | 1601057..1602265 | - | 1209 | WP_001383960.1 | IncI1-type conjugal transfer protein TrbA | - |
| MOP59_RS07720 (1602572) | 1602572..1603351 | - | 780 | WP_275450201.1 | protein FinQ | - |
| - (1603866) | 1603866..1603926 | - | 61 | NuclAT_1 | - | Antitoxin Detail |
| - (1603866) | 1603866..1603926 | - | 61 | NuclAT_1 | - | Antitoxin Detail |
| - (1603866) | 1603866..1603926 | - | 61 | NuclAT_1 | - | Antitoxin Detail |
| - (1603866) | 1603866..1603926 | - | 61 | NuclAT_1 | - | Antitoxin Detail |
| MOP59_RS07725 (1603978) | 1603978..1604130 | + | 153 | WP_001387489.1 | Hok/Gef family protein | Toxin Detail |
| MOP59_RS07730 (1604202) | 1604202..1604453 | - | 252 | WP_001291964.1 | hypothetical protein | - |
| MOP59_RS24590 (1604954) | 1604954..1605049 | + | 96 | WP_000609148.1 | DinQ-like type I toxin DqlB | - |
| MOP59_RS07740 (1605114) | 1605114..1605290 | - | 177 | WP_001054897.1 | hypothetical protein | - |
| MOP59_RS07745 (1605682) | 1605682..1605891 | + | 210 | WP_000062603.1 | HEAT repeat domain-containing protein | - |
| MOP59_RS07750 (1605963) | 1605963..1606625 | - | 663 | WP_000644796.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| MOP59_RS07755 (1606696) | 1606696..1608864 | - | 2169 | WP_058649949.1 | DotA/TraY family protein | - |
| MOP59_RS07760 (1608961) | 1608961..1609545 | - | 585 | WP_001037996.1 | IncI1-type conjugal transfer protein TraX | - |
| MOP59_RS07765 (1609574) | 1609574..1610776 | - | 1203 | WP_001189156.1 | IncI1-type conjugal transfer protein TraW | - |
| MOP59_RS07770 (1610743) | 1610743..1611357 | - | 615 | WP_000337399.1 | IncI1-type conjugal transfer protein TraV | - |
| MOP59_RS07775 (1611357) | 1611357..1614401 | - | 3045 | WP_001024776.1 | IncI1-type conjugal transfer protein TraU | - |
| MOP59_RS07780 (1614491) | 1614491..1615291 | - | 801 | WP_001164792.1 | IncI1-type conjugal transfer protein TraT | - |
| MOP59_RS07785 (1615275) | 1615275..1615463 | - | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| MOP59_RS07790 (1615527) | 1615527..1615931 | - | 405 | WP_000086960.1 | IncI1-type conjugal transfer protein TraR | - |
| MOP59_RS07795 (1615982) | 1615982..1616509 | - | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| MOP59_RS07800 (1616509) | 1616509..1617213 | - | 705 | WP_023155244.1 | IncI1-type conjugal transfer protein TraP | - |
| MOP59_RS07805 (1617213) | 1617213..1618502 | - | 1290 | WP_001271994.1 | conjugal transfer protein TraO | - |
| MOP59_RS07810 (1618505) | 1618505..1619488 | - | 984 | WP_021513963.1 | hypothetical protein | VF |
| MOP59_RS07815 (1619499) | 1619499..1620191 | - | 693 | WP_000138552.1 | DotI/IcmL family type IV secretion protein | - |
| MOP59_RS07820 (1620188) | 1620188..1620535 | - | 348 | WP_001055900.1 | conjugal transfer protein | - |
| MOP59_RS07825 (1620553) | 1620553..1624320 | - | 3768 | WP_058649948.1 | DUF5710 domain-containing protein | - |
| MOP59_RS07830 (1624410) | 1624410..1624961 | - | 552 | WP_000014584.1 | Phospholipase D | VF |
| MOP59_RS07835 (1624976) | 1624976..1625266 | - | 291 | WP_001299214.1 | hypothetical protein | - |
| MOP59_RS07840 (1625263) | 1625263..1626411 | - | 1149 | WP_001024976.1 | putative protein YggR | VF |
| MOP59_RS07845 (1626408) | 1626408..1627226 | - | 819 | WP_000646097.1 | hypothetical protein | VF |
| MOP59_RS07850 (1627223) | 1627223..1627681 | - | 459 | WP_001079808.1 | hypothetical protein | VF |
| MOP59_RS07855 (1628076) | 1628076..1628660 | - | 585 | WP_000977520.1 | histidine phosphatase family protein | - |
| MOP59_RS07860 (1628720) | 1628720..1629922 | - | 1203 | WP_000976353.1 | conjugal transfer protein TraF | - |
| MOP59_RS07865 (1630008) | 1630008..1630832 | - | 825 | WP_058649947.1 | conjugal transfer protein TraE | - |
| MOP59_RS07870 (1630983) | 1630983..1632137 | - | 1155 | WP_001139955.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| MOP59_RS07875 (1632827) | 1632827..1633075 | + | 249 | WP_001349157.1 | hypothetical protein | - |
| MOP59_RS07880 (1633072) | 1633072..1634364 | - | 1293 | WP_039719938.1 | hypothetical protein | VF |
| MOP59_RS07885 (1634364) | 1634364..1635020 | - | 657 | WP_001193551.1 | hypothetical protein | VF |
| MOP59_RS07890 (1635005) | 1635005..1635565 | - | 561 | WP_000014005.1 | hypothetical protein | VF |
| MOP59_RS07895 (1635575) | 1635575..1636189 | - | 615 | WP_000908228.1 | hypothetical protein | VF |
| MOP59_RS07900 (1636206) | 1636206..1637291 | - | 1086 | WP_001208803.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| MOP59_RS07905 (1637304) | 1637304..1638857 | - | 1554 | WP_000362204.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| MOP59_RS07910 (1638868) | 1638868..1639320 | - | 453 | WP_058649963.1 | hypothetical protein | VF |
| MOP59_RS07915 (1639307) | 1639307..1640602 | - | 1296 | WP_058649964.1 | type 4b pilus protein PilO2 | - |
| MOP59_RS07920 (1640595) | 1640595..1642277 | - | 1683 | WP_000748143.1 | Outer membrane lipoprotein BfpB | VF |
| MOP59_RS07925 (1642291) | 1642291..1642728 | - | 438 | WP_000539807.1 | hypothetical protein | VF |
| MOP59_RS07930 (1642728) | 1642728..1643795 | - | 1068 | WP_001360287.1 | type IV pilus biogenesis lipoprotein PilL | - |
| MOP59_RS07935 (1644767) | 1644767..1645027 | - | 261 | WP_023994105.1 | hypothetical protein | - |
| MOP59_RS07940 (1645288) | 1645288..1645542 | - | 255 | WP_001136187.1 | PilI type IV pilus biogenesis protein | - |
| MOP59_RS07945 (1645714) | 1645714..1646397 | - | 684 | WP_000213859.1 | conjugal transfer protein TraC | - |
| MOP59_RS07950 (1646650) | 1646650..1647183 | - | 534 | WP_001306770.1 | transcription termination/antitermination NusG family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|