MGE detailed information
MGE type: Genomic_island MGE length: 56397 bp
Accession: NZ_CP092534 Location: 4362090..4418486 Organism: Escherichia coli strain DS566 Replicon: chromosome
Accession: NZ_CP092534 Location: 4362090..4418486 Organism: Escherichia coli strain DS566 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MKD44_RS21230 (4357529) | 4357529..4358222 | + | 694 | Protein_4154 | IS1 family transposase | - |
| MKD44_RS21235 (4358840) | 4358840..4359184 | + | 345 | Protein_4155 | alcohol dehydrogenase catalytic domain-containing protein | - |
| MKD44_RS21240 (4359257) | 4359257..4360413 | + | 1157 | WP_100183773.1 | IS3 family transposase | - |
| MKD44_RS21245 (4360434) | 4360434..4360619 | + | 186 | Protein_4157 | transposase domain-containing protein | - |
| MKD44_RS21250 (4360754) | 4360754..4362082 | + | 1329 | WP_000019624.1 | nucleotidyltransferase | - |
| MKD44_RS21255 (4362090) | 4362090..4362665 | + | 576 | WP_001774140.1 | SLATT domain-containing protein | - |
| MKD44_RS21260 (4363218) | 4363218..4363943 | - | 726 | WP_000020778.1 | TatD family hydrolase | - |
| MKD44_RS21265 (4363940) | 4363940..4365244 | - | 1305 | WP_000192872.1 | hypothetical protein | - |
| MKD44_RS21270 (4365241) | 4365241..4365993 | - | 753 | WP_000537317.1 | hypothetical protein | - |
| MKD44_RS21275 (4365993) | 4365993..4367777 | - | 1785 | WP_000269403.1 | P-loop NTPase fold protein | - |
| MKD44_RS21280 (4367909) | 4367909..4369435 | - | 1527 | WP_205248123.1 | hypothetical protein | - |
| MKD44_RS21285 (4369674) | 4369674..4370150 | - | 477 | Protein_4165 | hypothetical protein | - |
| MKD44_RS21290 (4370150) | 4370150..4370494 | - | 345 | Protein_4166 | ShlB/FhaC/HecB family hemolysin secretion/activation protein | - |
| MKD44_RS21295 (4371174) | 4371174..4371365 | + | 192 | WP_001287878.1 | DUF4222 domain-containing protein | - |
| MKD44_RS21300 (4371418) | 4371418..4371651 | - | 234 | WP_000124176.1 | hypothetical protein | - |
| MKD44_RS21305 (4371747) | 4371747..4372246 | - | 500 | Protein_4169 | DNA-binding protein | - |
| MKD44_RS21310 (4372597) | 4372597..4373715 | + | 1119 | WP_000135343.1 | NAD-dependent methanol dehydrogenase | VF |
| MKD44_RS21315 (4373855) | 4373855..4374541 | + | 687 | WP_001109982.1 | propanediol utilization system phosphotransacylase GrpB | - |
| MKD44_RS21320 (4374596) | 4374596..4375354 | + | 759 | WP_001332070.1 | propanediol utilization system chaperone GrpC | - |
| MKD44_RS21325 (4375338) | 4375338..4376063 | + | 726 | WP_001329683.1 | propanediol utilization system flavoprotein GrpD | - |
| MKD44_RS21330 (4376075) | 4376075..4376344 | + | 270 | WP_000280292.1 | propanediol utilization microcompartment vertex protein GrpE | - |
| MKD44_RS21335 (4376372) | 4376372..4376869 | + | 498 | WP_001332069.1 | propanediol utilization system heme-binding protein GrpF | - |
| MKD44_RS21340 (4376898) | 4376898..4378094 | + | 1197 | WP_001362987.1 | propanediol utilization system propionate kinase GrpG | - |
| MKD44_RS21345 (4378379) | 4378379..4378660 | + | 282 | WP_001301171.1 | propanediol utilization system shell hexameric protein GrpH | - |
| MKD44_RS21350 (4378682) | 4378682..4379467 | + | 786 | WP_001205499.1 | propanediol utilization microcompartment protein GrpI | - |
| MKD44_RS21355 (4379528) | 4379528..4381045 | + | 1518 | WP_001773853.1 | Aldehyde-alcohol dehydrogenase | VF |
| MKD44_RS21360 (4381069) | 4381069..4381368 | + | 300 | WP_000746009.1 | propanediol utilization system shell hexameric protein GrpK | - |
| MKD44_RS21365 (4381379) | 4381379..4381954 | + | 576 | WP_000722279.1 | propanediol utilization system protease GrpL | - |
| MKD44_RS21370 (4382003) | 4382003..4384555 | + | 2553 | WP_000890295.1 | glycyl radical diol dehydratase GrpM | - |
| MKD44_RS21375 (4384664) | 4384664..4385581 | + | 918 | WP_001044977.1 | glycyl radical diol dehydratase-activating enzyme GrpN | - |
| MKD44_RS21380 (4385718) | 4385718..4386623 | + | 906 | WP_001086421.1 | propanediol utilization system permease GrpO | - |
| MKD44_RS21385 (4387109) | 4387109..4387648 | + | 540 | WP_001332064.1 | maturase | - |
| MKD44_RS21390 (4387676) | 4387676..4388197 | + | 522 | WP_000237741.1 | reverse transcriptase domain-containing protein | - |
| MKD44_RS21395 (4388747) | 4388747..4390009 | + | 1263 | WP_001329690.1 | propanediol utilization sensor histidine kinase GrpP | - |
| MKD44_RS21400 (4390026) | 4390026..4391081 | + | 1056 | WP_000494233.1 | HTH-type transcriptional activator Btr | VF |
| MKD44_RS21405 (4391210) | 4391210..4392361 | + | 1152 | WP_001001003.1 | propanediol utilization system methionine adenosyltransferase GrpR | - |
| MKD44_RS21410 (4392406) | 4392406..4392951 | + | 546 | WP_000015571.1 | propanediol utilization system shell hexameric protein GrpS | - |
| MKD44_RS21415 (4393308) | 4393308..4393652 | - | 345 | WP_001773854.1 | Transposon Tn10 TetD protein | VF |
| MKD44_RS21420 (4393903) | 4393903..4394295 | - | 393 | WP_224156610.1 | TetR family transcriptional regulator | - |
| MKD44_RS21425 (4394395) | 4394395..4395543 | - | 1149 | Protein_4193 | Multidrug resistance protein MexB | VF |
| MKD44_RS21430 (4395643) | 4395643..4395903 | + | 261 | Protein_4194 | IS3 family transposase IS2 | Transposase |
| MKD44_RS21435 (4395895) | 4395895..4395957 | - | 63 | Protein_4195 | IS3 family transposase IS2 | Transposase |
| MKD44_RS21440 (4396086) | 4396086..4396211 | - | 126 | WP_000831909.1 | hypothetical protein | - |
| MKD44_RS21445 (4396208) | 4396208..4396441 | - | 234 | WP_000958492.1 | AlpA family transcriptional regulator | - |
| MKD44_RS21450 (4396510) | 4396510..4397085 | - | 576 | WP_000991593.1 | hypothetical protein | - |
| MKD44_RS21455 (4397432) | 4397432..4398163 | - | 732 | WP_001075472.1 | inovirus Gp2 family protein | - |
| MKD44_RS21460 (4399616) | 4399616..4400839 | - | 1224 | WP_001773856.1 | hypothetical protein | - |
| MKD44_RS21465 (4400940) | 4400940..4401824 | + | 885 | WP_001116801.1 | YfjP family GTPase | - |
| MKD44_RS21470 (4402027) | 4402027..4402707 | + | 681 | WP_001282919.1 | WYL domain-containing protein | - |
| MKD44_RS21475 (4402855) | 4402855..4403532 | + | 678 | WP_001097301.1 | hypothetical protein | - |
| MKD44_RS21480 (4403538) | 4403538..4403771 | + | 234 | WP_001278283.1 | DUF905 family protein | - |
| MKD44_RS21485 (4403861) | 4403861..4404679 | + | 819 | WP_001773857.1 | DUF932 domain-containing protein | - |
| MKD44_RS21490 (4404770) | 4404770..4405255 | + | 486 | WP_000214398.1 | antirestriction protein | - |
| MKD44_RS21495 (4405271) | 4405271..4405747 | + | 477 | WP_001186786.1 | RadC family protein | - |
| MKD44_RS21500 (4405810) | 4405810..4406031 | + | 222 | WP_000692311.1 | DUF987 domain-containing protein | - |
| MKD44_RS21505 (4406194) | 4406194..4406562 | + | 369 | WP_001540478.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| MKD44_RS21510 (4406652) | 4406652..4407026 | + | 375 | WP_000854753.1 | TA system toxin CbtA family protein | Toxin Detail |
| MKD44_RS21515 (4407023) | 4407023..4407511 | + | 489 | WP_000777545.1 | DUF5983 family protein | - |
| MKD44_RS21520 (4407523) | 4407523..4407720 | + | 198 | WP_000839281.1 | DUF957 domain-containing protein | - |
| MKD44_RS21525 (4407817) | 4407817..4408386 | + | 570 | WP_001560692.1 | DUF4942 domain-containing protein | - |
| MKD44_RS21530 (4409135) | 4409135..4410673 | + | 1539 | WP_001187191.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| MKD44_RS21535 (4411039) | 4411039..4412373 | + | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| MKD44_RS21540 (4412453) | 4412453..4414600 | + | 2148 | WP_001296667.1 | lysine decarboxylase CadA | - |
| MKD44_RS21545 (4414659) | 4414659..4416116 | + | 1458 | WP_000856826.1 | dipeptide/tripeptide permease DtpC | - |
| MKD44_RS21550 (4416353) | 4416353..4417870 | + | 1518 | WP_000003806.1 | lysine--tRNA ligase | - |
| MKD44_RS21555 (4417989) | 4417989..4418162 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| MKD44_RS21560 (4418190) | 4418190..4418486 | - | 297 | WP_001312331.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| MKD44_RS21565 (4418715) | 4418715..4418987 | - | 273 | WP_000405647.1 | GNAT family N-acetyltransferase | - |
| MKD44_RS21570 (4418999) | 4418999..4419229 | - | 231 | WP_000373293.1 | 4Fe-4S mono-cluster protein YjdI | - |
| MKD44_RS21575 (4419410) | 4419410..4421041 | + | 1632 | WP_001216482.1 | sensor histidine kinase | - |
| MKD44_RS21580 (4421038) | 4421038..4421757 | + | 720 | WP_001540474.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|