MGE detailed information
MGE type: Genomic_island MGE length: 56397 bp
Accession: NZ_CP092533 Location: 4361914..4418310 Organism: Escherichia coli strain DS566-1 Replicon: chromosome
Accession: NZ_CP092533 Location: 4361914..4418310 Organism: Escherichia coli strain DS566-1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MKD47_RS21225 (4357353) | 4357353..4358046 | + | 694 | Protein_4153 | IS1 family transposase | - |
| MKD47_RS21230 (4358664) | 4358664..4359008 | + | 345 | Protein_4154 | alcohol dehydrogenase catalytic domain-containing protein | - |
| MKD47_RS21235 (4359081) | 4359081..4360237 | + | 1157 | WP_100183773.1 | IS3 family transposase | - |
| MKD47_RS21240 (4360258) | 4360258..4360443 | + | 186 | Protein_4156 | transposase domain-containing protein | - |
| MKD47_RS21245 (4360578) | 4360578..4361906 | + | 1329 | WP_000019624.1 | nucleotidyltransferase | - |
| MKD47_RS21250 (4361914) | 4361914..4362489 | + | 576 | WP_001774140.1 | SLATT domain-containing protein | - |
| MKD47_RS21255 (4363042) | 4363042..4363767 | - | 726 | WP_000020778.1 | TatD family hydrolase | - |
| MKD47_RS21260 (4363764) | 4363764..4365068 | - | 1305 | WP_000192872.1 | hypothetical protein | - |
| MKD47_RS21265 (4365065) | 4365065..4365817 | - | 753 | WP_000537317.1 | hypothetical protein | - |
| MKD47_RS21270 (4365817) | 4365817..4367601 | - | 1785 | WP_000269403.1 | P-loop NTPase fold protein | - |
| MKD47_RS21275 (4367733) | 4367733..4369259 | - | 1527 | WP_205248123.1 | hypothetical protein | - |
| MKD47_RS21280 (4369498) | 4369498..4369974 | - | 477 | Protein_4164 | hypothetical protein | - |
| MKD47_RS21285 (4369974) | 4369974..4370318 | - | 345 | Protein_4165 | ShlB/FhaC/HecB family hemolysin secretion/activation protein | - |
| MKD47_RS21290 (4370998) | 4370998..4371189 | + | 192 | WP_001287878.1 | DUF4222 domain-containing protein | - |
| MKD47_RS21295 (4371242) | 4371242..4371475 | - | 234 | WP_000124176.1 | hypothetical protein | - |
| MKD47_RS21300 (4371571) | 4371571..4372070 | - | 500 | Protein_4168 | DNA-binding protein | - |
| MKD47_RS21305 (4372421) | 4372421..4373539 | + | 1119 | WP_000135343.1 | hypothetical protein | VF |
| MKD47_RS21310 (4373679) | 4373679..4374365 | + | 687 | WP_001109982.1 | propanediol utilization system phosphotransacylase GrpB | - |
| MKD47_RS21315 (4374420) | 4374420..4375178 | + | 759 | WP_001332070.1 | propanediol utilization system chaperone GrpC | - |
| MKD47_RS21320 (4375162) | 4375162..4375887 | + | 726 | WP_001329683.1 | propanediol utilization system flavoprotein GrpD | - |
| MKD47_RS21325 (4375899) | 4375899..4376168 | + | 270 | WP_000280292.1 | propanediol utilization microcompartment vertex protein GrpE | - |
| MKD47_RS21330 (4376196) | 4376196..4376693 | + | 498 | WP_001332069.1 | propanediol utilization system heme-binding protein GrpF | - |
| MKD47_RS21335 (4376722) | 4376722..4377918 | + | 1197 | WP_001362987.1 | propanediol utilization system propionate kinase GrpG | - |
| MKD47_RS21340 (4378203) | 4378203..4378484 | + | 282 | WP_001301171.1 | propanediol utilization system shell hexameric protein GrpH | - |
| MKD47_RS21345 (4378506) | 4378506..4379291 | + | 786 | WP_001205499.1 | propanediol utilization microcompartment protein GrpI | - |
| MKD47_RS21350 (4379352) | 4379352..4380869 | + | 1518 | WP_001773853.1 | N-succinylglutamate 5-semialdehyde dehydrogenase | VF |
| MKD47_RS21355 (4380893) | 4380893..4381192 | + | 300 | WP_000746009.1 | propanediol utilization system shell hexameric protein GrpK | - |
| MKD47_RS21360 (4381203) | 4381203..4381778 | + | 576 | WP_000722279.1 | propanediol utilization system protease GrpL | - |
| MKD47_RS21365 (4381827) | 4381827..4384379 | + | 2553 | WP_000890295.1 | glycyl radical diol dehydratase GrpM | - |
| MKD47_RS21370 (4384488) | 4384488..4385405 | + | 918 | WP_001044977.1 | glycyl radical diol dehydratase-activating enzyme GrpN | - |
| MKD47_RS21375 (4385542) | 4385542..4386447 | + | 906 | WP_001086421.1 | propanediol utilization system permease GrpO | - |
| MKD47_RS21380 (4386933) | 4386933..4387472 | + | 540 | WP_001332064.1 | maturase | - |
| MKD47_RS21385 (4387500) | 4387500..4388021 | + | 522 | WP_000237741.1 | reverse transcriptase domain-containing protein | - |
| MKD47_RS21390 (4388571) | 4388571..4389833 | + | 1263 | WP_001329690.1 | propanediol utilization sensor histidine kinase GrpP | - |
| MKD47_RS21395 (4389850) | 4389850..4390905 | + | 1056 | WP_000494233.1 | HTH-type transcriptional activator RhaR | VF |
| MKD47_RS21400 (4391034) | 4391034..4392185 | + | 1152 | WP_001001003.1 | propanediol utilization system methionine adenosyltransferase GrpR | - |
| MKD47_RS21405 (4392230) | 4392230..4392775 | + | 546 | WP_000015571.1 | propanediol utilization system shell hexameric protein GrpS | - |
| MKD47_RS21410 (4393132) | 4393132..4393476 | - | 345 | WP_001773854.1 | hypothetical protein | VF |
| MKD47_RS21415 (4393727) | 4393727..4394113 | - | 387 | WP_153782320.1 | TetR family transcriptional regulator | - |
| MKD47_RS21420 (4394219) | 4394219..4395367 | - | 1149 | Protein_4192 | Multidrug resistance protein MdtB | VF |
| MKD47_RS21425 (4395467) | 4395467..4395727 | + | 261 | Protein_4193 | IS3 family transposase IS2 | Transposase |
| MKD47_RS21430 (4395719) | 4395719..4395781 | - | 63 | Protein_4194 | IS3 family transposase IS2 | Transposase |
| MKD47_RS21435 (4395910) | 4395910..4396035 | - | 126 | WP_000831909.1 | hypothetical protein | - |
| MKD47_RS21440 (4396032) | 4396032..4396265 | - | 234 | WP_000958492.1 | AlpA family transcriptional regulator | - |
| MKD47_RS21445 (4396334) | 4396334..4396909 | - | 576 | WP_000991593.1 | hypothetical protein | - |
| MKD47_RS21450 (4397256) | 4397256..4397987 | - | 732 | WP_001075472.1 | inovirus Gp2 family protein | - |
| MKD47_RS21455 (4399440) | 4399440..4400663 | - | 1224 | WP_001773856.1 | hypothetical protein | - |
| MKD47_RS21460 (4400764) | 4400764..4401648 | + | 885 | WP_001116801.1 | YfjP family GTPase | - |
| MKD47_RS21465 (4401851) | 4401851..4402531 | + | 681 | WP_001282919.1 | WYL domain-containing protein | - |
| MKD47_RS21470 (4402679) | 4402679..4403356 | + | 678 | WP_001097301.1 | hypothetical protein | - |
| MKD47_RS21475 (4403362) | 4403362..4403595 | + | 234 | WP_001278283.1 | DUF905 family protein | - |
| MKD47_RS21480 (4403685) | 4403685..4404503 | + | 819 | WP_001773857.1 | DUF932 domain-containing protein | - |
| MKD47_RS21485 (4404594) | 4404594..4405079 | + | 486 | WP_000214398.1 | antirestriction protein | - |
| MKD47_RS21490 (4405095) | 4405095..4405571 | + | 477 | WP_001186786.1 | RadC family protein | - |
| MKD47_RS21495 (4405634) | 4405634..4405855 | + | 222 | WP_000692311.1 | DUF987 domain-containing protein | - |
| MKD47_RS21500 (4406018) | 4406018..4406386 | + | 369 | WP_001540478.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| MKD47_RS21505 (4406476) | 4406476..4406850 | + | 375 | WP_000854753.1 | TA system toxin CbtA family protein | Toxin Detail |
| MKD47_RS21510 (4406847) | 4406847..4407335 | + | 489 | WP_000777545.1 | DUF5983 family protein | - |
| MKD47_RS21515 (4407347) | 4407347..4407544 | + | 198 | WP_000839281.1 | DUF957 domain-containing protein | - |
| MKD47_RS21520 (4407641) | 4407641..4408210 | + | 570 | WP_001560692.1 | DUF4942 domain-containing protein | - |
| MKD47_RS21525 (4408959) | 4408959..4410497 | + | 1539 | WP_001187191.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| MKD47_RS21530 (4410863) | 4410863..4412197 | + | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| MKD47_RS21535 (4412277) | 4412277..4414424 | + | 2148 | WP_001296667.1 | lysine decarboxylase CadA | - |
| MKD47_RS21540 (4414483) | 4414483..4415940 | + | 1458 | WP_000856826.1 | dipeptide/tripeptide permease DtpC | - |
| MKD47_RS21545 (4416177) | 4416177..4417694 | + | 1518 | WP_000003806.1 | lysine--tRNA ligase | - |
| MKD47_RS21550 (4417813) | 4417813..4417986 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| MKD47_RS21555 (4418014) | 4418014..4418310 | - | 297 | WP_001312331.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| MKD47_RS21560 (4418539) | 4418539..4418811 | - | 273 | WP_000405647.1 | GNAT family N-acetyltransferase | - |
| MKD47_RS21565 (4418823) | 4418823..4419053 | - | 231 | WP_000373293.1 | 4Fe-4S mono-cluster protein YjdI | - |
| MKD47_RS21570 (4419234) | 4419234..4420865 | + | 1632 | WP_001216482.1 | sensor histidine kinase | - |
| MKD47_RS21575 (4420862) | 4420862..4421581 | + | 720 | WP_001540474.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|