MGE detailed information
MGE type: Genomic_island MGE length: 9352 bp
Accession: NZ_CP091839 Location: 3454048..3463399 Organism: Escherichia coli strain SWYHX138.261ft Replicon: chromosome
Accession: NZ_CP091839 Location: 3454048..3463399 Organism: Escherichia coli strain SWYHX138.261ft Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| L7H22_RS16570 (3450779) | 3450779..3451498 | - | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
| L7H22_RS16575 (3451495) | 3451495..3453126 | - | 1632 | WP_001216477.1 | sensor histidine kinase | - |
| L7H22_RS16580 (3453307) | 3453307..3453537 | + | 231 | WP_000371704.1 | 4Fe-4S mono-cluster protein YjdI | - |
| L7H22_RS16585 (3453549) | 3453549..3453821 | + | 273 | WP_000405647.1 | GNAT family N-acetyltransferase | - |
| L7H22_RS16590 (3454048) | 3454048..3454344 | + | 297 | WP_095716590.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| L7H22_RS16595 (3454372) | 3454372..3454545 | + | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| L7H22_RS16600 (3454664) | 3454664..3456181 | - | 1518 | WP_112911841.1 | lysine--tRNA ligase | - |
| L7H22_RS16605 (3456418) | 3456418..3457875 | - | 1458 | WP_000856829.1 | dipeptide/tripeptide permease DtpC | - |
| L7H22_RS16610 (3457934) | 3457934..3460081 | - | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| L7H22_RS16615 (3460161) | 3460161..3461495 | - | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| L7H22_RS16620 (3461861) | 3461861..3463399 | - | 1539 | WP_001187177.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| L7H22_RS16630 (3464198) | 3464198..3464773 | - | 576 | WP_001188520.1 | transcriptional regulator | - |
| L7H22_RS16635 (3464810) | 3464810..3466507 | - | 1698 | WP_080030373.1 | protein-disulfide reductase DsbD | - |
| L7H22_RS16640 (3466483) | 3466483..3466821 | - | 339 | WP_000883400.1 | divalent cation tolerance protein CutA | - |
| L7H22_RS16645 (3466937) | 3466937..3468238 | - | 1302 | WP_000961959.1 | anaerobic C4-dicarboxylate transporter DcuA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20087 | HG738867 | 4238430..4247780 | 0.007 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21458 | NC_007779 | 4357262..4366612 | 0.007 | |
| Escherichia coli BW2952 | Genomic island | TA23874 | NC_012759 | 4289342..4298692 | 0.007 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285032 | NZ_HG738867 | 4238430..4247780 | 0.007 |